RNA–Protein interactions for RNA: ENST00000567188.5

CNOT1-211, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best)

Gene CNOT1, Length 7,830 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-211ENST00000567188 WDR63Q8IWG1 891 aa6.97□□□□□ -1.29
CNOT1-211ENST00000567188 LTN1O94822 1766 aa6.97□□□□□ -1.29
CNOT1-211ENST00000567188 MYOM1P52179 1685 aa6.97□□□□□ -1.29
CNOT1-211ENST00000567188 KCNQ2O43526 872 aa6.97□□□□□ -1.29
CNOT1-211ENST00000567188 CCDC192P0DO97 292 aa6.97□□□□□ -1.29
CNOT1-211ENST00000567188 PDCP20941 246 aa6.97□□□□□ -1.29
CNOT1-211ENST00000567188 MAP2K2P36507 400 aa6.97□□□□□ -1.29
CNOT1-211ENST00000567188 WASHC4Q2M389 1173 aa6.97□□□□□ -1.29
CNOT1-211ENST00000567188 CWF19L2Q2TBE0 894 aaKnown RBP6.97□□□□□ -1.29
CNOT1-211ENST00000567188 G2E3Q7L622 706 aa6.97□□□□□ -1.29
CNOT1-211ENST00000567188 SRRTQ9BXP5 876 aaKnown RBP6.97□□□□□ -1.29
CNOT1-211ENST00000567188 PARD3Q8TEW0 1356 aa6.97□□□□□ -1.29
CNOT1-211ENST00000567188 LRRC7Q96NW7 1537 aa6.97□□□□□ -1.29
CNOT1-211ENST00000567188 MCTP1Q6DN14 999 aa6.97□□□□□ -1.29
CNOT1-211ENST00000567188 TUBBP07437 444 aa6.96□□□□□ -1.29
CNOT1-211ENST00000567188 RFX1P22670 979 aa6.96□□□□□ -1.29
CNOT1-211ENST00000567188 FKBP4Q02790 459 aaKnown RBP eCLIP6.96□□□□□ -1.29
CNOT1-211ENST00000567188 LRRFIP2Q9Y608 721 aaKnown RBP6.96□□□□□ -1.29
CNOT1-211ENST00000567188 POLR3AO14802 1390 aaPredicted RBP6.96□□□□□ -1.29
CNOT1-211ENST00000567188 CCDC38Q502W7 563 aa6.96□□□□□ -1.29
CNOT1-211ENST00000567188 FAM114A1Q8IWE2 563 aa6.96□□□□□ -1.29
CNOT1-211ENST00000567188 GCC1Q96CN9 775 aa6.96□□□□□ -1.29
CNOT1-211ENST00000567188 FMN2Q9NZ56 1722 aa6.96□□□□□ -1.3
CNOT1-211ENST00000567188 TRAPPC3LQ5T215 181 aa6.96□□□□□ -1.3
CNOT1-211ENST00000567188 KIF18AQ8NI77 898 aa6.96□□□□□ -1.3
CNOT1-211ENST00000567188 ANO2Q9NQ90 1003 aa6.96□□□□□ -1.3
CNOT1-211ENST00000567188 IQSEC3Q9UPP2 1182 aaPredicted RBP6.96□□□□□ -1.3
CNOT1-211ENST00000567188 RTCBQ9Y3I0 505 aaKnown RBP6.96□□□□□ -1.3
CNOT1-211ENST00000567188 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.96□□□□□ -1.3
CNOT1-211ENST00000567188 SURF6O75683 361 aaKnown RBP6.96□□□□□ -1.3
CNOT1-211ENST00000567188 PHKG2P15735 406 aa6.96□□□□□ -1.3
CNOT1-211ENST00000567188 COPS6Q7L5N1 327 aa6.96□□□□□ -1.3
CNOT1-211ENST00000567188 ZKSCAN5Q9Y2L8 839 aa6.96□□□□□ -1.3
CNOT1-211ENST00000567188 TECPR2O15040 1411 aa6.96□□□□□ -1.3
CNOT1-211ENST00000567188 H3BQV1 296 aa6.96□□□□□ -1.3
CNOT1-211ENST00000567188 CCDC57Q2TAC2 916 aa6.96□□□□□ -1.3
CNOT1-211ENST00000567188 IFFO2Q5TF58 517 aa6.96□□□□□ -1.3
CNOT1-211ENST00000567188 NBPF5PQ86XG9 351 aaPredicted RBP6.96□□□□□ -1.3
CNOT1-211ENST00000567188 NRXN3Q9Y4C0 1643 aa6.96□□□□□ -1.3
CNOT1-211ENST00000567188 CBFA2T2O43439 604 aa6.96□□□□□ -1.3
CNOT1-211ENST00000567188 FOXD4L6Q3SYB3 417 aaPredicted RBP6.96□□□□□ -1.3
CNOT1-211ENST00000567188 FOXD4L3Q6VB84 417 aaPredicted RBP6.96□□□□□ -1.3
CNOT1-211ENST00000567188 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.96□□□□□ -1.3
CNOT1-211ENST00000567188 SLIT1O75093 1534 aa6.95□□□□□ -1.3
CNOT1-211ENST00000567188 SETDB2Q96T68 719 aa6.95□□□□□ -1.3
CNOT1-211ENST00000567188 STK32BQ9NY57 414 aa6.95□□□□□ -1.3
CNOT1-211ENST00000567188 GNAI2P04899 355 aa6.95□□□□□ -1.3
CNOT1-211ENST00000567188 SNRPA1P09661 255 aaKnown RBP6.95□□□□□ -1.3
CNOT1-211ENST00000567188 ENOX2Q16206 610 aaKnown RBP6.95□□□□□ -1.3
CNOT1-211ENST00000567188 RBM26Q5T8P6 1007 aaKnown RBP6.95□□□□□ -1.3
CNOT1-211ENST00000567188 AACSQ86V21 672 aa6.95□□□□□ -1.3
CNOT1-211ENST00000567188 SSH1Q8WYL5 1049 aa6.95□□□□□ -1.3
CNOT1-211ENST00000567188 PLEKHG3A1L390 1219 aa6.95□□□□□ -1.3
CNOT1-211ENST00000567188 TRIM5Q9C035 493 aa6.95□□□□□ -1.3
CNOT1-211ENST00000567188 LRRCC1Q9C099 1032 aa6.95□□□□□ -1.3
CNOT1-211ENST00000567188 ERCC3P19447 782 aa6.95□□□□□ -1.3
CNOT1-211ENST00000567188 HMGB2P26583 209 aaKnown RBP6.95□□□□□ -1.3
CNOT1-211ENST00000567188 CCDC171Q6TFL3 1326 aa6.95□□□□□ -1.3
CNOT1-211ENST00000567188 RGPD2P0DJD1 1756 aa6.95□□□□□ -1.3
CNOT1-211ENST00000567188 MPHOSPH8Q99549 860 aa6.95□□□□□ -1.3
CNOT1-211ENST00000567188 PSMA5P28066 241 aa6.95□□□□□ -1.3
CNOT1-211ENST00000567188 ANKRD18AQ8IVF6 992 aa6.95□□□□□ -1.3
CNOT1-211ENST00000567188 CCDC8Q9H0W5 538 aaPredicted RBP6.95□□□□□ -1.3
CNOT1-211ENST00000567188 TRIM35Q9UPQ4 493 aa6.95□□□□□ -1.3
CNOT1-211ENST00000567188 ZSCAN12O43309 604 aa6.94□□□□□ -1.3
CNOT1-211ENST00000567188 CAVIN2O95810 425 aa6.94□□□□□ -1.3
CNOT1-211ENST00000567188 ZNF652Q9Y2D9 606 aa6.94□□□□□ -1.3
CNOT1-211ENST00000567188 PTCH1Q13635 1447 aa6.94□□□□□ -1.3
CNOT1-211ENST00000567188 CDC45O75419 566 aa6.94□□□□□ -1.3
CNOT1-211ENST00000567188 TRDNQ13061 729 aa6.94□□□□□ -1.3
CNOT1-211ENST00000567188 TCHPQ9BT92 498 aa6.94□□□□□ -1.3
CNOT1-211ENST00000567188 SEPT6Q14141 434 aa6.94□□□□□ -1.3
CNOT1-211ENST00000567188 SF3A1Q15459 793 aaKnown RBP6.94□□□□□ -1.3
CNOT1-211ENST00000567188 METTL24Q5JXM2 366 aa6.94□□□□□ -1.3
CNOT1-211ENST00000567188 TICAM2Q86XR7 235 aa6.94□□□□□ -1.3
CNOT1-211ENST00000567188 SRCIN1Q9C0H9 1055 aa6.94□□□□□ -1.3
CNOT1-211ENST00000567188 PA2G4Q9UQ80 394 aaKnown RBP6.94□□□□□ -1.3
CNOT1-211ENST00000567188 RBBP5Q15291 538 aaKnown RBP6.94□□□□□ -1.3
CNOT1-211ENST00000567188 CCDC73Q6ZRK6 1079 aa6.94□□□□□ -1.3
CNOT1-211ENST00000567188 SRP68Q9UHB9 627 aaKnown RBP6.94□□□□□ -1.3
CNOT1-211ENST00000567188 ANKARQ7Z5J8 1434 aa6.94□□□□□ -1.3
CNOT1-211ENST00000567188 KNDC1Q76NI1 1749 aa6.94□□□□□ -1.3
CNOT1-211ENST00000567188 NEURL4Q96JN8 1562 aa6.94□□□□□ -1.3
CNOT1-211ENST00000567188 MST1RQ04912 1400 aa6.94□□□□□ -1.3
CNOT1-211ENST00000567188 CCDC196A0A1B0GTZ2 297 aa6.94□□□□□ -1.3
CNOT1-211ENST00000567188 MRPL50Q8N5N7 158 aaKnown RBP6.94□□□□□ -1.3
CNOT1-211ENST00000567188 YY1AP1Q9H869 796 aa6.94□□□□□ -1.3
CNOT1-211ENST00000567188 ANKRD18BA2A2Z9 1011 aa6.94□□□□□ -1.3
CNOT1-211ENST00000567188 PI4KAP2A4QPH2 592 aa6.94□□□□□ -1.3
CNOT1-211ENST00000567188 TNNT1P13805 278 aa6.94□□□□□ -1.3
CNOT1-211ENST00000567188 HCLS1P14317 486 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-211ENST00000567188 PI4KAP1Q8N8J0 262 aa6.94□□□□□ -1.3
CNOT1-211ENST00000567188 HELBQ8NG08 1087 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-211ENST00000567188 ZNF594Q96JF6 807 aaPredicted RBP6.94□□□□□ -1.3
CNOT1-211ENST00000567188 DLC1Q96QB1 1528 aa6.94□□□□□ -1.3
CNOT1-211ENST00000567188 CPSF1Q10570 1443 aaKnown RBP6.94□□□□□ -1.3
CNOT1-211ENST00000567188 PER1O15534 1290 aaPredicted RBP6.93□□□□□ -1.3
CNOT1-211ENST00000567188 ZNF853P0CG23 659 aa6.93□□□□□ -1.3
CNOT1-211ENST00000567188 ATP2B2Q01814 1243 aa6.93□□□□□ -1.3
CNOT1-211ENST00000567188 PTPN14Q15678 1187 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms