RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 HMMRO75330 724 aa16.1■□□□□ 0.17
SPG7-209ENST00000564047 EPHA10Q5JZY3 1008 aa16.1■□□□□ 0.17
SPG7-209ENST00000564047 SLC10A5Q5PT55 438 aa16.1■□□□□ 0.17
SPG7-209ENST00000564047 B4GALNT3Q6L9W6 998 aa16.1■□□□□ 0.17
SPG7-209ENST00000564047 SYNE4Q8N205 404 aa16.1■□□□□ 0.17
SPG7-209ENST00000564047 POLRMTO00411 1230 aaKnown RBP16.09■□□□□ 0.17
SPG7-209ENST00000564047 SERPINB2P05120 415 aa16.09■□□□□ 0.17
SPG7-209ENST00000564047 GTF2E1P29083 439 aaPredicted RBP16.09■□□□□ 0.17
SPG7-209ENST00000564047 DDR1Q08345 913 aa16.09■□□□□ 0.17
SPG7-209ENST00000564047 ERFEQ4G0M1 354 aa16.09■□□□□ 0.17
SPG7-209ENST00000564047 NUTM1Q86Y26 1132 aa16.09■□□□□ 0.17
SPG7-209ENST00000564047 TSHZ2Q9NRE2 1034 aa16.09■□□□□ 0.17
SPG7-209ENST00000564047 PNMA6EA0A0J9YXQ4 647 aa16.08■□□□□ 0.16
SPG7-209ENST00000564047 SRGAP3O43295 1099 aa16.08■□□□□ 0.16
SPG7-209ENST00000564047 IGHDP01880 384 aa16.08■□□□□ 0.16
SPG7-209ENST00000564047 CSF1RP07333 972 aa16.08■□□□□ 0.16
SPG7-209ENST00000564047 POLA2Q14181 598 aa16.08■□□□□ 0.16
SPG7-209ENST00000564047 LMBR1LQ6UX01 489 aa16.08■□□□□ 0.16
SPG7-209ENST00000564047 CNBD1Q8NA66 436 aa16.08■□□□□ 0.16
SPG7-209ENST00000564047 SSH3Q8TE77 659 aa16.08■□□□□ 0.16
SPG7-209ENST00000564047 MMP10P09238 476 aa16.07■□□□□ 0.16
SPG7-209ENST00000564047 HCLS1P14317 486 aaPredicted RBP16.07■□□□□ 0.16
SPG7-209ENST00000564047 CTSWP56202 376 aa16.07■□□□□ 0.16
SPG7-209ENST00000564047 PRR5LQ6MZQ0 368 aa16.07■□□□□ 0.16
SPG7-209ENST00000564047 CENPQQ7L2Z9 268 aaPredicted RBP16.07■□□□□ 0.16
SPG7-209ENST00000564047 PARP3Q9Y6F1 533 aa16.07■□□□□ 0.16
SPG7-209ENST00000564047 RIC1Q4ADV7 1423 aa16.06■□□□□ 0.16
SPG7-209ENST00000564047 ABCC12Q96J65 1359 aa16.06■□□□□ 0.16
SPG7-209ENST00000564047 KDM2BQ8NHM5 1336 aa16.06■□□□□ 0.16
SPG7-209ENST00000564047 NPHP1O15259 732 aa16.06■□□□□ 0.16
SPG7-209ENST00000564047 DNAJC5GQ8N7S2 189 aa16.06■□□□□ 0.16
SPG7-209ENST00000564047 TOMM70O94826 608 aa16.05■□□□□ 0.16
SPG7-209ENST00000564047 ST5P78524 1137 aa16.05■□□□□ 0.16
SPG7-209ENST00000564047 TTLL11Q8NHH1 800 aa16.05■□□□□ 0.16
SPG7-209ENST00000564047 WWC3Q9ULE0 1092 aa16.05■□□□□ 0.16
SPG7-209ENST00000564047 SF3B3Q15393 1217 aaKnown RBP16.04■□□□□ 0.16
SPG7-209ENST00000564047 SMC5Q8IY18 1101 aa16.04■□□□□ 0.16
SPG7-209ENST00000564047 GCC1Q96CN9 775 aa16.04■□□□□ 0.16
SPG7-209ENST00000564047 NLRP3Q96P20 1036 aa16.04■□□□□ 0.16
SPG7-209ENST00000564047 DCTPP1Q9H773 170 aa16.04■□□□□ 0.16
SPG7-209ENST00000564047 RTL9Q8NET4 1388 aa16.03■□□□□ 0.16
SPG7-209ENST00000564047 RFX5P48382 616 aaPredicted RBP16.03■□□□□ 0.16
SPG7-209ENST00000564047 CCDC152Q4G0S7 254 aa16.03■□□□□ 0.16
SPG7-209ENST00000564047 CHMP3Q9Y3E7 222 aa16.03■□□□□ 0.16
SPG7-209ENST00000564047 LAMB2P55268 1798 aa16.03■□□□□ 0.16
SPG7-209ENST00000564047 WDR90Q96KV7 1748 aa16.02■□□□□ 0.16
SPG7-209ENST00000564047 CAPN15O75808 1086 aa16.02■□□□□ 0.16
SPG7-209ENST00000564047 IFIT5Q13325 482 aaKnown RBP16.02■□□□□ 0.16
SPG7-209ENST00000564047 CCDC57Q2TAC2 916 aa16.02■□□□□ 0.16
SPG7-209ENST00000564047 FAM161AQ3B820 660 aa16.02■□□□□ 0.16
SPG7-209ENST00000564047 CCDC24Q8N4L8 307 aa16.02■□□□□ 0.16
SPG7-209ENST00000564047 GREM2Q9H772 168 aa16.02■□□□□ 0.16
SPG7-209ENST00000564047 COPRSQ9NQ92 184 aa16.02■□□□□ 0.16
SPG7-209ENST00000564047 NOP58Q9Y2X3 529 aaKnown RBP16.02■□□□□ 0.16
SPG7-209ENST00000564047 DDX60Q8IY21 1712 aaKnown RBP16.02■□□□□ 0.15
SPG7-209ENST00000564047 NRXN2Q9P2S2 1712 aa16.02■□□□□ 0.15
SPG7-209ENST00000564047 ANKRD18BA2A2Z9 1011 aa16.01■□□□□ 0.15
SPG7-209ENST00000564047 PTPN12Q05209 780 aaKnown RBP16.01■□□□□ 0.15
SPG7-209ENST00000564047 HSP90AB4PQ58FF6 505 aa16.01■□□□□ 0.15
SPG7-209ENST00000564047 BRIP1Q9BX63 1249 aa16.01■□□□□ 0.15
SPG7-209ENST00000564047 KLRG2A4D1S0 409 aaPredicted RBP16■□□□□ 0.15
SPG7-209ENST00000564047 SURF6O75683 361 aaKnown RBP16■□□□□ 0.15
SPG7-209ENST00000564047 ITGA6P23229 1130 aa16■□□□□ 0.15
SPG7-209ENST00000564047 COL13A1Q5TAT6 717 aaPredicted RBP16■□□□□ 0.15
SPG7-209ENST00000564047 C3orf67Q6ZVT6 689 aa16■□□□□ 0.15
SPG7-209ENST00000564047 CCDC85AQ96PX6 553 aaPredicted RBP16■□□□□ 0.15
SPG7-209ENST00000564047 FBXO3Q9UK99 471 aa16■□□□□ 0.15
SPG7-209ENST00000564047 RAB11FIP3O75154 756 aa15.99■□□□□ 0.15
SPG7-209ENST00000564047 CRY2Q49AN0 593 aa15.99■□□□□ 0.15
SPG7-209ENST00000564047 PA2G4Q9UQ80 394 aaKnown RBP15.99■□□□□ 0.15
SPG7-209ENST00000564047 PDE6BP35913 854 aa15.98■□□□□ 0.15
SPG7-209ENST00000564047 TAF7LQ5H9L4 462 aa15.98■□□□□ 0.15
SPG7-209ENST00000564047 KLHDC4Q8TBB5 520 aa15.98■□□□□ 0.15
SPG7-209ENST00000564047 EXOC6BQ9Y2D4 811 aa15.98■□□□□ 0.15
SPG7-209ENST00000564047 CIAO1O76071 339 aa15.97■□□□□ 0.15
SPG7-209ENST00000564047 G3BP1Q13283 466 aaKnown RBP eCLIP15.97■□□□□ 0.15
SPG7-209ENST00000564047 ERC1Q8IUD2 1116 aa15.97■□□□□ 0.15
SPG7-209ENST00000564047 C16orf71Q8IYS4 520 aaPredicted RBP15.97■□□□□ 0.15
SPG7-209ENST00000564047 TNS4Q8IZW8 715 aa15.97■□□□□ 0.15
SPG7-209ENST00000564047 KLRG1Q96E93 195 aa15.97■□□□□ 0.15
SPG7-209ENST00000564047 ZNF594Q96JF6 807 aaPredicted RBP15.97■□□□□ 0.15
SPG7-209ENST00000564047 CDC5LQ99459 802 aaKnown RBP15.97■□□□□ 0.15
SPG7-209ENST00000564047 TNRC6CQ9HCJ0 1690 aaKnown RBP15.96■□□□□ 0.15
SPG7-209ENST00000564047 EYA2O00167 538 aa15.96■□□□□ 0.15
SPG7-209ENST00000564047 PRELPP51888 382 aa15.96■□□□□ 0.15
SPG7-209ENST00000564047 NUCB1Q02818 461 aa15.96■□□□□ 0.15
SPG7-209ENST00000564047 DDX46Q7L014 1031 aaKnown RBP15.96■□□□□ 0.15
SPG7-209ENST00000564047 RBM46Q8TBY0 533 aaKnown RBP15.96■□□□□ 0.15
SPG7-209ENST00000564047 SEC31BQ9NQW1 1179 aa15.96■□□□□ 0.15
SPG7-209ENST00000564047 PDZRN3Q9UPQ7 1066 aa15.96■□□□□ 0.15
SPG7-209ENST00000564047 MYH3P11055 1940 aa15.96■□□□□ 0.14
SPG7-209ENST00000564047 HOXA10P31260 410 aaPredicted RBP15.95■□□□□ 0.14
SPG7-209ENST00000564047 IGHMBP2P38935 993 aaKnown RBP15.95■□□□□ 0.14
SPG7-209ENST00000564047 IL15P40933 162 aaPredicted RBP15.95■□□□□ 0.14
SPG7-209ENST00000564047 OS9Q13438 667 aaPredicted RBP15.95■□□□□ 0.14
SPG7-209ENST00000564047 ANKRD45Q5TZF3 282 aa15.95■□□□□ 0.14
SPG7-209ENST00000564047 JMYQ8N9B5 988 aa15.95■□□□□ 0.14
SPG7-209ENST00000564047 RPGRQ92834 1020 aaKnown RBP15.95■□□□□ 0.14
SPG7-209ENST00000564047 KIF1BPQ96EK5 621 aa15.95■□□□□ 0.14
SPG7-209ENST00000564047 RBM17Q96I25 401 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms