RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 RARAP10276 462 aa8.74□□□□□ -1.01
USP8-218ENST00000561330 EPXP11678 715 aa8.74□□□□□ -1.01
USP8-218ENST00000561330 TRIP4Q15650 581 aaPredicted RBP8.74□□□□□ -1.01
USP8-218ENST00000561330 C1orf229Q6ZS94 237 aaPredicted RBP8.74□□□□□ -1.01
USP8-218ENST00000561330 FAM181BA6NEQ2 426 aa8.73□□□□□ -1.01
USP8-218ENST00000561330 FZD6O60353 706 aa8.73□□□□□ -1.01
USP8-218ENST00000561330 MAP3K6O95382 1288 aa8.73□□□□□ -1.01
USP8-218ENST00000561330 NEDD1Q8NHV4 660 aa8.73□□□□□ -1.01
USP8-218ENST00000561330 TNFRSF25Q93038 417 aa8.73□□□□□ -1.01
USP8-218ENST00000561330 IGFLR1Q9H665 355 aa8.73□□□□□ -1.01
USP8-218ENST00000561330 ZFATQ9P243 1243 aa8.73□□□□□ -1.01
USP8-218ENST00000561330 POLIQ9UNA4 740 aa8.73□□□□□ -1.01
USP8-218ENST00000561330 ADARB2-AS1A8MUL3 147 aa8.72□□□□□ -1.01
USP8-218ENST00000561330 ARHGEF15O94989 841 aa8.72□□□□□ -1.01
USP8-218ENST00000561330 ALAS2P22557 587 aa8.72□□□□□ -1.01
USP8-218ENST00000561330 USP5P45974 858 aa8.72□□□□□ -1.01
USP8-218ENST00000561330 ARHGAP4P98171 946 aa8.72□□□□□ -1.01
USP8-218ENST00000561330 TBC1D8BQ0IIM8 1120 aa8.72□□□□□ -1.01
USP8-218ENST00000561330 ECM1Q16610 540 aa8.72□□□□□ -1.01
USP8-218ENST00000561330 C8orf34Q49A92 452 aa8.72□□□□□ -1.01
USP8-218ENST00000561330 NLRP13Q86W25 1043 aa8.72□□□□□ -1.01
USP8-218ENST00000561330 UBE2OQ9C0C9 1292 aaKnown RBP8.72□□□□□ -1.01
USP8-218ENST00000561330 CCDC87Q9NVE4 849 aa8.72□□□□□ -1.01
USP8-218ENST00000561330 BIN2Q9UBW5 565 aaPredicted RBP8.72□□□□□ -1.01
USP8-218ENST00000561330 BRPF3Q9ULD4 1205 aa8.72□□□□□ -1.01
USP8-218ENST00000561330 ELOA3CA0A087WX78 387 aaPredicted RBP8.71□□□□□ -1.02
USP8-218ENST00000561330 ELOA3DA6NLF2 546 aaPredicted RBP8.71□□□□□ -1.02
USP8-218ENST00000561330 SHISA8B8ZZ34 492 aa8.71□□□□□ -1.02
USP8-218ENST00000561330 ELOA3BQ3SY89 546 aa8.71□□□□□ -1.02
USP8-218ENST00000561330 ELOA3Q8NG57 546 aa8.71□□□□□ -1.02
USP8-218ENST00000561330 STK17AQ9UEE5 414 aa8.71□□□□□ -1.02
USP8-218ENST00000561330 NDUFB5O43674 189 aa8.7□□□□□ -1.02
USP8-218ENST00000561330 AMPD1P23109 780 aa8.7□□□□□ -1.02
USP8-218ENST00000561330 ADH7P40394 386 aa8.7□□□□□ -1.02
USP8-218ENST00000561330 PDE12Q6L8Q7 609 aaKnown RBP8.7□□□□□ -1.02
USP8-218ENST00000561330 DHX32Q7L7V1 743 aaKnown RBP8.7□□□□□ -1.02
USP8-218ENST00000561330 ZNF438Q7Z4V0 828 aa8.7□□□□□ -1.02
USP8-218ENST00000561330 BTBD6Q96KE9 485 aa8.7□□□□□ -1.02
USP8-218ENST00000561330 GGNBP2Q9H3C7 697 aa8.7□□□□□ -1.02
USP8-218ENST00000561330 TLR7Q9NYK1 1049 aaKnown RBP8.7□□□□□ -1.02
USP8-218ENST00000561330 PSAPP07602 524 aa8.69□□□□□ -1.02
USP8-218ENST00000561330 PCSK7Q16549 785 aa8.69□□□□□ -1.02
USP8-218ENST00000561330 TTC39BQ5VTQ0 682 aaPredicted RBP8.69□□□□□ -1.02
USP8-218ENST00000561330 MDFIQ99750 246 aa8.69□□□□□ -1.02
USP8-218ENST00000561330 ELP3Q9H9T3 547 aa8.69□□□□□ -1.02
USP8-218ENST00000561330 DNAJB12Q9NXW2 375 aaKnown RBP8.69□□□□□ -1.02
USP8-218ENST00000561330 ADAMTS8Q9UP79 889 aa8.69□□□□□ -1.02
USP8-218ENST00000561330 MMP20O60882 483 aa8.68□□□□□ -1.02
USP8-218ENST00000561330 MARSP56192 900 aaKnown RBP8.68□□□□□ -1.02
USP8-218ENST00000561330 EHHADHQ08426 723 aa8.68□□□□□ -1.02
USP8-218ENST00000561330 XKR5Q6UX68 686 aa8.68□□□□□ -1.02
USP8-218ENST00000561330 CHSY3Q70JA7 882 aa8.68□□□□□ -1.02
USP8-218ENST00000561330 A6NHS1 94 aa8.67□□□□□ -1.02
USP8-218ENST00000561330 PLAURQ03405 335 aa8.67□□□□□ -1.02
USP8-218ENST00000561330 GJD3Q8N144 294 aa8.67□□□□□ -1.02
USP8-218ENST00000561330 TRPM4Q8TD43 1214 aa8.67□□□□□ -1.02
USP8-218ENST00000561330 RRAGCQ9HB90 399 aa8.67□□□□□ -1.02
USP8-218ENST00000561330 ABI2Q9NYB9 513 aaPredicted RBP8.67□□□□□ -1.02
USP8-218ENST00000561330 SLC6A14Q9UN76 642 aa8.67□□□□□ -1.02
USP8-218ENST00000561330 NRLP54845 237 aa8.66□□□□□ -1.02
USP8-218ENST00000561330 GPLD1P80108 840 aa8.66□□□□□ -1.02
USP8-218ENST00000561330 CITED4Q96RK1 184 aa8.66□□□□□ -1.02
USP8-218ENST00000561330 TMEM63CQ9P1W3 806 aa8.66□□□□□ -1.02
USP8-218ENST00000561330 ZBTB42B2RXF5 422 aa8.65□□□□□ -1.02
USP8-218ENST00000561330 SOX18P35713 384 aa8.65□□□□□ -1.02
USP8-218ENST00000561330 MLLT1Q03111 559 aaPredicted RBP8.65□□□□□ -1.02
USP8-218ENST00000561330 PDE3BQ13370 1112 aa8.65□□□□□ -1.02
USP8-218ENST00000561330 KANK3Q6NY19 840 aa8.65□□□□□ -1.02
USP8-218ENST00000561330 OR13H1Q8NG92 308 aa8.65□□□□□ -1.02
USP8-218ENST00000561330 FAM35AQ86V20 835 aa8.64□□□□□ -1.03
USP8-218ENST00000561330 TMC1Q8TDI8 760 aa8.64□□□□□ -1.03
USP8-218ENST00000561330 NSUN5Q96P11 429 aaKnown RBP8.64□□□□□ -1.03
USP8-218ENST00000561330 DCTN4Q9UJW0 460 aa8.64□□□□□ -1.03
USP8-218ENST00000561330 STARD13Q9Y3M8 1113 aa8.64□□□□□ -1.03
USP8-218ENST00000561330 PHF20L1A8MW92 1017 aa8.63□□□□□ -1.03
USP8-218ENST00000561330 HOXD8P13378 290 aaPredicted RBP8.63□□□□□ -1.03
USP8-218ENST00000561330 CPB1P15086 417 aa8.63□□□□□ -1.03
USP8-218ENST00000561330 PODNQ7Z5L7 613 aa8.63□□□□□ -1.03
USP8-218ENST00000561330 BEND7Q8N7W2 519 aaPredicted RBP8.63□□□□□ -1.03
USP8-218ENST00000561330 LOC102724428A0A0B4J2F2 783 aa8.62□□□□□ -1.03
USP8-218ENST00000561330 TNFRSF21O75509 655 aa8.62□□□□□ -1.03
USP8-218ENST00000561330 CES1P23141 567 aa8.62□□□□□ -1.03
USP8-218ENST00000561330 SIK1P57059 783 aa8.62□□□□□ -1.03
USP8-218ENST00000561330 HYAL2Q12891 473 aa8.62□□□□□ -1.03
USP8-218ENST00000561330 HFE2Q6ZVN8 426 aa8.62□□□□□ -1.03
USP8-218ENST00000561330 SNX29Q8TEQ0 813 aa8.62□□□□□ -1.03
USP8-218ENST00000561330 SCARF2Q96GP6 870 aaPredicted RBP8.62□□□□□ -1.03
USP8-218ENST00000561330 RBCK1Q9BYM8 510 aa8.62□□□□□ -1.03
USP8-218ENST00000561330 CNTN3Q9P232 1028 aa8.62□□□□□ -1.03
USP8-218ENST00000561330 NAGPAQ9UK23 515 aa8.62□□□□□ -1.03
USP8-218ENST00000561330 J3QW42 95 aa8.61□□□□□ -1.03
USP8-218ENST00000561330 PHACTR2O75167 634 aa8.61□□□□□ -1.03
USP8-218ENST00000561330 EIF2AK2P19525 551 aaKnown RBP8.61□□□□□ -1.03
USP8-218ENST00000561330 MAPK1P28482 360 aa8.61□□□□□ -1.03
USP8-218ENST00000561330 SNRPNP63162 240 aaKnown RBP8.61□□□□□ -1.03
USP8-218ENST00000561330 PSAPL1Q6NUJ1 521 aa8.61□□□□□ -1.03
USP8-218ENST00000561330 SND1Q7KZF4 910 aaKnown RBP eCLIP8.61□□□□□ -1.03
USP8-218ENST00000561330 C1orf127Q8N9H9 656 aa8.61□□□□□ -1.03
USP8-218ENST00000561330 PMEPA1Q969W9 287 aa8.61□□□□□ -1.03
USP8-218ENST00000561330 RBSNQ9H1K0 784 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms