RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 FAM196BA6NMK8 535 aa7.39□□□□□ -1.23
SNRPA1-209ENST00000560307 ZNF500O60304 480 aaPredicted RBP7.39□□□□□ -1.23
SNRPA1-209ENST00000560307 ADH1CP00326 375 aa7.39□□□□□ -1.23
SNRPA1-209ENST00000560307 CT47B1P0C2W7 299 aaPredicted RBP7.39□□□□□ -1.23
SNRPA1-209ENST00000560307 TIMP2P16035 220 aa7.39□□□□□ -1.23
SNRPA1-209ENST00000560307 RAB3GAP1Q15042 981 aa7.39□□□□□ -1.23
SNRPA1-209ENST00000560307 C22orf23Q9BZE7 217 aa7.39□□□□□ -1.23
SNRPA1-209ENST00000560307 CEP126Q9P2H0 1117 aa7.39□□□□□ -1.23
SNRPA1-209ENST00000560307 AMOTL2Q9Y2J4 779 aa7.39□□□□□ -1.23
SNRPA1-209ENST00000560307 CDC42BPBQ9Y5S2 1711 aa7.38□□□□□ -1.23
SNRPA1-209ENST00000560307 TRPM2O94759 1503 aa7.38□□□□□ -1.23
SNRPA1-209ENST00000560307 ATP5J2-PTCD1G3V325 749 aa7.38□□□□□ -1.23
SNRPA1-209ENST00000560307 GOLGA6L22H0YM25 854 aa7.38□□□□□ -1.23
SNRPA1-209ENST00000560307 DYNC1I1O14576 645 aa7.38□□□□□ -1.23
SNRPA1-209ENST00000560307 TSPY4P0CV99 314 aa7.38□□□□□ -1.23
SNRPA1-209ENST00000560307 TSPY10P0CW01 314 aa7.38□□□□□ -1.23
SNRPA1-209ENST00000560307 NCLP19338 710 aaKnown RBP7.38□□□□□ -1.23
SNRPA1-209ENST00000560307 MSNP26038 577 aaKnown RBP7.38□□□□□ -1.23
SNRPA1-209ENST00000560307 ARID4AP29374 1257 aaPredicted RBP7.38□□□□□ -1.23
SNRPA1-209ENST00000560307 PLPP7Q8NBV4 271 aa7.38□□□□□ -1.23
SNRPA1-209ENST00000560307 ZNF592Q92610 1267 aa7.38□□□□□ -1.23
SNRPA1-209ENST00000560307 UHRF1BP1LA0JNW5 1464 aa7.37□□□□□ -1.23
SNRPA1-209ENST00000560307 CCNYL3P0C7X3 344 aa7.37□□□□□ -1.23
SNRPA1-209ENST00000560307 ZNF445P59923 1031 aa7.37□□□□□ -1.23
SNRPA1-209ENST00000560307 KCNH2Q12809 1159 aa7.37□□□□□ -1.23
SNRPA1-209ENST00000560307 RNFT1Q5M7Z0 435 aa7.37□□□□□ -1.23
SNRPA1-209ENST00000560307 WDR63Q8IWG1 891 aa7.37□□□□□ -1.23
SNRPA1-209ENST00000560307 ARMC2Q8NEN0 867 aa7.37□□□□□ -1.23
SNRPA1-209ENST00000560307 ZNF594Q96JF6 807 aaPredicted RBP7.37□□□□□ -1.23
SNRPA1-209ENST00000560307 NUDT12Q9BQG2 462 aa7.37□□□□□ -1.23
SNRPA1-209ENST00000560307 INO80Q9ULG1 1556 aaPredicted RBP7.37□□□□□ -1.23
SNRPA1-209ENST00000560307 CARMIL2Q6F5E8 1435 aa7.36□□□□□ -1.23
SNRPA1-209ENST00000560307 BCAR3O75815 825 aa7.36□□□□□ -1.23
SNRPA1-209ENST00000560307 BMP2P12643 396 aa7.36□□□□□ -1.23
SNRPA1-209ENST00000560307 CANXP27824 592 aaKnown RBP7.36□□□□□ -1.23
SNRPA1-209ENST00000560307 PTK7Q13308 1070 aa7.36□□□□□ -1.23
SNRPA1-209ENST00000560307 HDAC1Q13547 482 aaPredicted RBP7.36□□□□□ -1.23
SNRPA1-209ENST00000560307 KLHL40Q2TBA0 621 aa7.36□□□□□ -1.23
SNRPA1-209ENST00000560307 EML3Q32P44 896 aa7.36□□□□□ -1.23
SNRPA1-209ENST00000560307 NBPF14Q5TI25 921 aa7.36□□□□□ -1.23
SNRPA1-209ENST00000560307 PDXDC2PQ6P474 469 aa7.36□□□□□ -1.23
SNRPA1-209ENST00000560307 TXNDC2Q86VQ3 553 aa7.36□□□□□ -1.23
SNRPA1-209ENST00000560307 ANKMY2Q8IV38 441 aa7.36□□□□□ -1.23
SNRPA1-209ENST00000560307 ARHGAP9Q9BRR9 750 aa7.36□□□□□ -1.23
SNRPA1-209ENST00000560307 BIN2Q9UBW5 565 aaPredicted RBP7.36□□□□□ -1.23
SNRPA1-209ENST00000560307 SBNO2Q9Y2G9 1366 aa7.35□□□□□ -1.23
SNRPA1-209ENST00000560307 ZC3H13Q5T200 1668 aaKnown RBP7.35□□□□□ -1.23
SNRPA1-209ENST00000560307 BTBD11A6QL63 1104 aa7.35□□□□□ -1.23
SNRPA1-209ENST00000560307 PROCP04070 461 aa7.35□□□□□ -1.23
SNRPA1-209ENST00000560307 ATP2B4P23634 1241 aa7.35□□□□□ -1.23
SNRPA1-209ENST00000560307 SSFA2P28290 1259 aa7.35□□□□□ -1.23
SNRPA1-209ENST00000560307 NASPP49321 788 aaPredicted RBP7.35□□□□□ -1.23
SNRPA1-209ENST00000560307 RARSP54136 660 aaKnown RBP7.35□□□□□ -1.23
SNRPA1-209ENST00000560307 RIPK4P57078 832 aa7.35□□□□□ -1.23
SNRPA1-209ENST00000560307 SH3BP2P78314 561 aa7.35□□□□□ -1.23
SNRPA1-209ENST00000560307 MAP3K10Q02779 954 aa7.35□□□□□ -1.23
SNRPA1-209ENST00000560307 DPYDQ12882 1025 aa7.35□□□□□ -1.23
SNRPA1-209ENST00000560307 PHLDB3Q6NSJ2 640 aa7.35□□□□□ -1.23
SNRPA1-209ENST00000560307 ZBTB33Q86T24 672 aa7.35□□□□□ -1.23
SNRPA1-209ENST00000560307 OGFOD1Q8N543 542 aa7.35□□□□□ -1.23
SNRPA1-209ENST00000560307 ADAM32Q8TC27 787 aa7.35□□□□□ -1.23
SNRPA1-209ENST00000560307 DCAF5Q96JK2 942 aa7.35□□□□□ -1.23
SNRPA1-209ENST00000560307 PDLIM2Q96JY6 352 aa7.35□□□□□ -1.23
SNRPA1-209ENST00000560307 CDCA7Q9BWT1 371 aaPredicted RBP7.35□□□□□ -1.23
SNRPA1-209ENST00000560307 NOL7Q9UMY1 257 aaKnown RBP7.35□□□□□ -1.23
SNRPA1-209ENST00000560307 MYOM2P54296 1465 aa7.35□□□□□ -1.23
SNRPA1-209ENST00000560307 MRC2Q9UBG0 1479 aa7.35□□□□□ -1.23
SNRPA1-209ENST00000560307 IFT172Q9UG01 1749 aa7.35□□□□□ -1.23
SNRPA1-209ENST00000560307 PPRC1Q5VV67 1664 aaKnown RBP7.35□□□□□ -1.23
SNRPA1-209ENST00000560307 ABCA6Q8N139 1617 aa7.34□□□□□ -1.23
SNRPA1-209ENST00000560307 UPP2O95045 317 aa7.34□□□□□ -1.23
SNRPA1-209ENST00000560307 SLURP2P0DP57 97 aa7.34□□□□□ -1.23
SNRPA1-209ENST00000560307 SERPINB4P48594 390 aa7.34□□□□□ -1.23
SNRPA1-209ENST00000560307 MVPQ14764 893 aaKnown RBP7.34□□□□□ -1.23
SNRPA1-209ENST00000560307 NBPF1Q3BBV0 1214 aa7.34□□□□□ -1.23
SNRPA1-209ENST00000560307 DZIP3Q86Y13 1208 aaKnown RBP7.34□□□□□ -1.23
SNRPA1-209ENST00000560307 TNPO1Q92973 898 aaKnown RBP7.34□□□□□ -1.23
SNRPA1-209ENST00000560307 CARD14Q9BXL6 1004 aa7.34□□□□□ -1.23
SNRPA1-209ENST00000560307 EVA1BQ9NVM1 165 aa7.34□□□□□ -1.23
SNRPA1-209ENST00000560307 GPSM3Q9Y4H4 160 aa7.34□□□□□ -1.23
SNRPA1-209ENST00000560307 PLB1Q6P1J6 1458 aa7.34□□□□□ -1.23
SNRPA1-209ENST00000560307 DEPDC5O75140 1603 aa7.34□□□□□ -1.24
SNRPA1-209ENST00000560307 MAGEB6P1A0A0J9YX57 407 aa7.33□□□□□ -1.24
SNRPA1-209ENST00000560307 APAF1O14727 1248 aa7.33□□□□□ -1.24
SNRPA1-209ENST00000560307 HSP90AB1P08238 724 aaKnown RBP7.33□□□□□ -1.24
SNRPA1-209ENST00000560307 MCCD1P59942 119 aaPredicted RBP7.33□□□□□ -1.24
SNRPA1-209ENST00000560307 OXLD1Q5BKU9 147 aa7.33□□□□□ -1.24
SNRPA1-209ENST00000560307 PTCRAQ6ISU1 281 aaPredicted RBP7.33□□□□□ -1.24
SNRPA1-209ENST00000560307 SASS6Q6UVJ0 657 aa7.33□□□□□ -1.24
SNRPA1-209ENST00000560307 GAS2L3Q86XJ1 694 aa7.33□□□□□ -1.24
SNRPA1-209ENST00000560307 GPKOWQ92917 476 aaPredicted RBP eCLIP7.33□□□□□ -1.24
SNRPA1-209ENST00000560307 DNAAF2Q9NVR5 837 aaKnown RBP7.33□□□□□ -1.24
SNRPA1-209ENST00000560307 SLAIN2Q9P270 581 aa7.33□□□□□ -1.24
SNRPA1-209ENST00000560307 NOD1Q9Y239 953 aa7.33□□□□□ -1.24
SNRPA1-209ENST00000560307 MAP3K4Q9Y6R4 1608 aa7.33□□□□□ -1.24
SNRPA1-209ENST00000560307 SETBP1Q9Y6X0 1596 aa7.33□□□□□ -1.24
SNRPA1-209ENST00000560307 TET3O43151 1660 aa7.32□□□□□ -1.24
SNRPA1-209ENST00000560307 LZTS3O60299 673 aaPredicted RBP7.32□□□□□ -1.24
SNRPA1-209ENST00000560307 SCNN1AP37088 669 aa7.32□□□□□ -1.24
SNRPA1-209ENST00000560307 ATP1A2P50993 1020 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms