RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 CD33P20138 364 aa5.74□□□□□ -1.49
HMGB3P26-201ENST00000560051 IBSPP21815 317 aaPredicted RBP5.74□□□□□ -1.49
HMGB3P26-201ENST00000560051 GDF10P55107 478 aa5.74□□□□□ -1.49
HMGB3P26-201ENST00000560051 IGBP1P78318 339 aa5.74□□□□□ -1.49
HMGB3P26-201ENST00000560051 TNP2Q05952 138 aa5.74□□□□□ -1.49
HMGB3P26-201ENST00000560051 BICDL1Q6ZP65 573 aa5.74□□□□□ -1.49
HMGB3P26-201ENST00000560051 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.74□□□□□ -1.49
HMGB3P26-201ENST00000560051 AMOTL1Q8IY63 956 aa5.74□□□□□ -1.49
HMGB3P26-201ENST00000560051 MSL3Q8N5Y2 521 aaKnown RBP5.74□□□□□ -1.49
HMGB3P26-201ENST00000560051 OTUD6BQ8N6M0 293 aa5.74□□□□□ -1.49
HMGB3P26-201ENST00000560051 KRTAP4-8Q9BYQ9 185 aa5.74□□□□□ -1.49
HMGB3P26-201ENST00000560051 NEUROD4Q9HD90 331 aa5.74□□□□□ -1.49
HMGB3P26-201ENST00000560051 MARK1Q9P0L2 795 aa5.74□□□□□ -1.49
HMGB3P26-201ENST00000560051 SWAP70Q9UH65 585 aa5.74□□□□□ -1.49
HMGB3P26-201ENST00000560051 SBNO2Q9Y2G9 1366 aa5.74□□□□□ -1.49
HMGB3P26-201ENST00000560051 hCG_2014768A0A024R1R8 64 aa5.73□□□□□ -1.49
HMGB3P26-201ENST00000560051 PEX14O75381 377 aa5.73□□□□□ -1.49
HMGB3P26-201ENST00000560051 MAP4K4O95819 1239 aaPredicted RBP5.73□□□□□ -1.49
HMGB3P26-201ENST00000560051 ABL2P42684 1182 aa5.73□□□□□ -1.49
HMGB3P26-201ENST00000560051 SMTNP53814 917 aa5.73□□□□□ -1.49
HMGB3P26-201ENST00000560051 PCBP4P57723 403 aaKnown RBP5.73□□□□□ -1.49
HMGB3P26-201ENST00000560051 ZNF468Q5VIY5 522 aaPredicted RBP5.73□□□□□ -1.49
HMGB3P26-201ENST00000560051 ADAMTS19Q8TE59 1207 aa5.73□□□□□ -1.49
HMGB3P26-201ENST00000560051 VTI1AQ96AJ9 217 aa5.73□□□□□ -1.49
HMGB3P26-201ENST00000560051 NACC1Q96RE7 527 aa5.73□□□□□ -1.49
HMGB3P26-201ENST00000560051 BRINP2Q9C0B6 783 aa5.73□□□□□ -1.49
HMGB3P26-201ENST00000560051 DNAAF2Q9NVR5 837 aaKnown RBP5.73□□□□□ -1.49
HMGB3P26-201ENST00000560051 ZDHHC3Q9NYG2 299 aa5.73□□□□□ -1.49
HMGB3P26-201ENST00000560051 CABP1Q9NZU7 370 aa5.73□□□□□ -1.49
HMGB3P26-201ENST00000560051 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.73□□□□□ -1.49
HMGB3P26-201ENST00000560051 FRMD4BQ9Y2L6 1034 aa5.73□□□□□ -1.49
HMGB3P26-201ENST00000560051 RRP9O43818 475 aaKnown RBP5.72□□□□□ -1.49
HMGB3P26-201ENST00000560051 STAU1O95793 577 aaKnown RBP5.72□□□□□ -1.49
HMGB3P26-201ENST00000560051 APPP05067 770 aa5.72□□□□□ -1.49
HMGB3P26-201ENST00000560051 ATP4AP20648 1035 aa5.72□□□□□ -1.49
HMGB3P26-201ENST00000560051 VAMP1P23763 118 aa5.72□□□□□ -1.49
HMGB3P26-201ENST00000560051 FOXD4Q12950 439 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P26-201ENST00000560051 HSP90AA2PQ14568 343 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P26-201ENST00000560051 NBPF9Q3BBW0 867 aa5.72□□□□□ -1.49
HMGB3P26-201ENST00000560051 MAP7D1Q3KQU3 841 aa5.72□□□□□ -1.49
HMGB3P26-201ENST00000560051 HDGFL1Q5TGJ6 251 aa5.72□□□□□ -1.49
HMGB3P26-201ENST00000560051 ZNF280DQ6N043 979 aa5.72□□□□□ -1.49
HMGB3P26-201ENST00000560051 FCHSD1Q86WN1 690 aa5.72□□□□□ -1.49
HMGB3P26-201ENST00000560051 BSDC1Q9NW68 430 aaPredicted RBP5.72□□□□□ -1.49
HMGB3P26-201ENST00000560051 KLHL42Q9P2K6 505 aa5.72□□□□□ -1.49
HMGB3P26-201ENST00000560051 HDAC5Q9UQL6 1122 aa5.72□□□□□ -1.49
HMGB3P26-201ENST00000560051 ELOA3CA0A087WX78 387 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P26-201ENST00000560051 ELOA3DA6NLF2 546 aaPredicted RBP5.71□□□□□ -1.5
HMGB3P26-201ENST00000560051 FAM157BP0CG42 384 aa5.71□□□□□ -1.5
HMGB3P26-201ENST00000560051 TRIM28Q13263 835 aaKnown RBP5.71□□□□□ -1.5
HMGB3P26-201ENST00000560051 NEUROD1Q13562 356 aa5.71□□□□□ -1.5
HMGB3P26-201ENST00000560051 LAMC2Q13753 1193 aa5.71□□□□□ -1.5
HMGB3P26-201ENST00000560051 TSGA10IPQ3SY00 556 aa5.71□□□□□ -1.5
HMGB3P26-201ENST00000560051 ELOA3BQ3SY89 546 aa5.71□□□□□ -1.5
HMGB3P26-201ENST00000560051 C4orf46Q504U0 113 aa5.71□□□□□ -1.5
HMGB3P26-201ENST00000560051 PHTF2Q8N3S3 785 aa5.71□□□□□ -1.5
HMGB3P26-201ENST00000560051 LARGE2Q8N3Y3 721 aa5.71□□□□□ -1.5
HMGB3P26-201ENST00000560051 ELOA3Q8NG57 546 aa5.71□□□□□ -1.5
HMGB3P26-201ENST00000560051 ZCRB1Q8TBF4 217 aaKnown RBP5.71□□□□□ -1.5
HMGB3P26-201ENST00000560051 TRIM11Q96F44 468 aa5.71□□□□□ -1.5
HMGB3P26-201ENST00000560051 SCYL1Q96KG9 808 aa5.71□□□□□ -1.5
HMGB3P26-201ENST00000560051 SERTAD1Q9UHV2 236 aa5.71□□□□□ -1.5
HMGB3P26-201ENST00000560051 RPS6KL1Q9Y6S9 549 aa5.71□□□□□ -1.5
HMGB3P26-201ENST00000560051 CDK2AP1O14519 115 aa5.7□□□□□ -1.5
HMGB3P26-201ENST00000560051 RECKO95980 971 aa5.7□□□□□ -1.5
HMGB3P26-201ENST00000560051 PPP1R12CQ9BZL4 782 aa5.7□□□□□ -1.5
HMGB3P26-201ENST00000560051 KLF15Q9UIH9 416 aa5.7□□□□□ -1.5
HMGB3P26-201ENST00000560051 A6NJY4 79 aa5.69□□□□□ -1.5
HMGB3P26-201ENST00000560051 TCERG1O14776 1098 aaKnown RBP5.69□□□□□ -1.5
HMGB3P26-201ENST00000560051 BACH1O14867 736 aa5.69□□□□□ -1.5
HMGB3P26-201ENST00000560051 U2SURPO15042 1029 aaKnown RBP5.69□□□□□ -1.5
HMGB3P26-201ENST00000560051 ATG7O95352 703 aa5.69□□□□□ -1.5
HMGB3P26-201ENST00000560051 PARNO95453 639 aaKnown RBP5.69□□□□□ -1.5
HMGB3P26-201ENST00000560051 SSR1P43307 286 aaKnown RBP5.69□□□□□ -1.5
HMGB3P26-201ENST00000560051 SCNN1DP51172 638 aa5.69□□□□□ -1.5
HMGB3P26-201ENST00000560051 XPCQ01831 940 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P26-201ENST00000560051 POU5F1Q01860 360 aaKnown RBP5.69□□□□□ -1.5
HMGB3P26-201ENST00000560051 SEMA3FQ13275 785 aa5.69□□□□□ -1.5
HMGB3P26-201ENST00000560051 TBC1D10BQ4KMP7 808 aaPredicted RBP5.69□□□□□ -1.5
HMGB3P26-201ENST00000560051 CDCA8Q53HL2 280 aa5.69□□□□□ -1.5
HMGB3P26-201ENST00000560051 HSP90AB3PQ58FF7 597 aa5.69□□□□□ -1.5
HMGB3P26-201ENST00000560051 CC2D1BQ5T0F9 858 aaKnown RBP5.69□□□□□ -1.5
HMGB3P26-201ENST00000560051 SAMD5Q5TGI4 173 aa5.69□□□□□ -1.5
HMGB3P26-201ENST00000560051 NPAS4Q8IUM7 802 aa5.69□□□□□ -1.5
HMGB3P26-201ENST00000560051 EVI5LQ96CN4 794 aa5.69□□□□□ -1.5
HMGB3P26-201ENST00000560051 ZIC5Q96T25 663 aa5.69□□□□□ -1.5
HMGB3P26-201ENST00000560051 LNPKQ9C0E8 428 aa5.69□□□□□ -1.5
HMGB3P26-201ENST00000560051 ABCF2Q9UG63 623 aa5.69□□□□□ -1.5
HMGB3P26-201ENST00000560051 TBC1D2BQ9UPU7 963 aa5.69□□□□□ -1.5
HMGB3P26-201ENST00000560051 TLDC2A0PJX2 215 aa5.68□□□□□ -1.5
HMGB3P26-201ENST00000560051 EPB41L2O43491 1005 aaKnown RBP5.68□□□□□ -1.5
HMGB3P26-201ENST00000560051 IRX3P78415 501 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P26-201ENST00000560051 GJC2Q5T442 439 aaPredicted RBP5.68□□□□□ -1.5
HMGB3P26-201ENST00000560051 EGFLAMQ63HQ2 1017 aa5.68□□□□□ -1.5
HMGB3P26-201ENST00000560051 B4GALNT3Q6L9W6 998 aa5.68□□□□□ -1.5
HMGB3P26-201ENST00000560051 PCGF5Q86SE9 256 aa5.68□□□□□ -1.5
HMGB3P26-201ENST00000560051 SYT9Q86SS6 491 aa5.68□□□□□ -1.5
HMGB3P26-201ENST00000560051 LSM14AQ8ND56 463 aaKnown RBP5.68□□□□□ -1.5
HMGB3P26-201ENST00000560051 KCNB2Q92953 911 aa5.68□□□□□ -1.5
HMGB3P26-201ENST00000560051 ZFP64Q9NPA5 681 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms