RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 A0A1W2PP64 1363 aa9.12□□□□□ -0.95
MARK3-212ENST00000558223 hCG_2014768A0A024R1R8 64 aa9.12□□□□□ -0.95
MARK3-212ENST00000558223 LCE2BO14633 110 aa9.12□□□□□ -0.95
MARK3-212ENST00000558223 FYB1O15117 783 aa9.12□□□□□ -0.95
MARK3-212ENST00000558223 IBSPP21815 317 aaPredicted RBP9.12□□□□□ -0.95
MARK3-212ENST00000558223 FKBP4Q02790 459 aaKnown RBP eCLIP9.12□□□□□ -0.95
MARK3-212ENST00000558223 MLECQ14165 292 aa9.12□□□□□ -0.95
MARK3-212ENST00000558223 PMFBP1Q8TBY8 1022 aa9.12□□□□□ -0.95
MARK3-212ENST00000558223 ZNF526Q8TF50 670 aaPredicted RBP9.12□□□□□ -0.95
MARK3-212ENST00000558223 GTF3C2Q8WUA4 911 aaPredicted RBP9.12□□□□□ -0.95
MARK3-212ENST00000558223 RNF34Q969K3 372 aa9.12□□□□□ -0.95
MARK3-212ENST00000558223 PRIMPOLQ96LW4 560 aa9.12□□□□□ -0.95
MARK3-212ENST00000558223 DNAAF2Q9NVR5 837 aaKnown RBP9.12□□□□□ -0.95
MARK3-212ENST00000558223 PPME1Q9Y570 386 aa9.12□□□□□ -0.95
MARK3-212ENST00000558223 PNPLA6Q8IY17 1366 aa9.12□□□□□ -0.95
MARK3-212ENST00000558223 PLEKHG1Q9ULL1 1385 aa9.12□□□□□ -0.95
MARK3-212ENST00000558223 U2AF1L5P0DN76 240 aaPredicted RBP9.11□□□□□ -0.95
MARK3-212ENST00000558223 U2AF1Q01081 240 aaKnown RBP eCLIP9.11□□□□□ -0.95
MARK3-212ENST00000558223 SF3B2Q13435 895 aaKnown RBP9.11□□□□□ -0.95
MARK3-212ENST00000558223 EGFLAMQ63HQ2 1017 aa9.11□□□□□ -0.95
MARK3-212ENST00000558223 CENPQQ7L2Z9 268 aaPredicted RBP9.11□□□□□ -0.95
MARK3-212ENST00000558223 THEMISQ8N1K5 641 aaPredicted RBP9.11□□□□□ -0.95
MARK3-212ENST00000558223 LARGE2Q8N3Y3 721 aa9.11□□□□□ -0.95
MARK3-212ENST00000558223 TCP11L2Q8N4U5 519 aa9.11□□□□□ -0.95
MARK3-212ENST00000558223 PLPP7Q8NBV4 271 aa9.11□□□□□ -0.95
MARK3-212ENST00000558223 EXOC6Q8TAG9 804 aa9.11□□□□□ -0.95
MARK3-212ENST00000558223 EDC4Q6P2E9 1401 aaKnown RBP9.11□□□□□ -0.95
MARK3-212ENST00000558223 AATKQ6ZMQ8 1374 aa9.11□□□□□ -0.95
MARK3-212ENST00000558223 TSPOAP1O95153 1857 aa9.11□□□□□ -0.95
MARK3-212ENST00000558223 MAPK8IP3Q9UPT6 1336 aa9.1□□□□□ -0.95
MARK3-212ENST00000558223 DIAPH1O60610 1272 aaKnown RBP9.1□□□□□ -0.95
MARK3-212ENST00000558223 CLSTN1O94985 981 aa9.1□□□□□ -0.95
MARK3-212ENST00000558223 FMNL1O95466 1100 aaPredicted RBP9.1□□□□□ -0.95
MARK3-212ENST00000558223 FGD1P98174 961 aa9.1□□□□□ -0.95
MARK3-212ENST00000558223 KCNH2Q12809 1159 aa9.1□□□□□ -0.95
MARK3-212ENST00000558223 NKX2-3Q8TAU0 364 aa9.1□□□□□ -0.95
MARK3-212ENST00000558223 CABP1Q9NZU7 370 aa9.1□□□□□ -0.95
MARK3-212ENST00000558223 TBX22Q9Y458 520 aa9.1□□□□□ -0.95
MARK3-212ENST00000558223 KIF13AQ9H1H9 1805 aa9.1□□□□□ -0.95
MARK3-212ENST00000558223 P4HBP07237 508 aaKnown RBP9.09□□□□□ -0.95
MARK3-212ENST00000558223 PTPROQ16827 1216 aa9.09□□□□□ -0.95
MARK3-212ENST00000558223 METTL16Q86W50 562 aaKnown RBP9.09□□□□□ -0.95
MARK3-212ENST00000558223 CCDC146Q8IYE0 955 aa9.09□□□□□ -0.95
MARK3-212ENST00000558223 CHMP4BQ9H444 224 aaKnown RBP9.09□□□□□ -0.95
MARK3-212ENST00000558223 METTL5Q9NRN9 209 aaKnown RBP9.09□□□□□ -0.95
MARK3-212ENST00000558223 CEP126Q9P2H0 1117 aa9.09□□□□□ -0.95
MARK3-212ENST00000558223 RIPOR2Q9Y4F9 1068 aa9.09□□□□□ -0.95
MARK3-212ENST00000558223 CPSF1Q10570 1443 aaKnown RBP9.08□□□□□ -0.96
MARK3-212ENST00000558223 GFRA3O60609 400 aa9.08□□□□□ -0.96
MARK3-212ENST00000558223 DNAJA1P31689 397 aaKnown RBP9.08□□□□□ -0.96
MARK3-212ENST00000558223 SEC13P55735 322 aa9.08□□□□□ -0.96
MARK3-212ENST00000558223 COPS2P61201 443 aa9.08□□□□□ -0.96
MARK3-212ENST00000558223 CLDN10P78369 228 aa9.08□□□□□ -0.96
MARK3-212ENST00000558223 ARHGAP4P98171 946 aa9.08□□□□□ -0.96
MARK3-212ENST00000558223 LMOD3Q0VAK6 560 aa9.08□□□□□ -0.96
MARK3-212ENST00000558223 SAFB2Q14151 953 aaKnown RBP eCLIP9.08□□□□□ -0.96
MARK3-212ENST00000558223 MAP7D1Q3KQU3 841 aa9.08□□□□□ -0.96
MARK3-212ENST00000558223 SOGA3Q5TF21 947 aa9.08□□□□□ -0.96
MARK3-212ENST00000558223 PPP1R18Q6NYC8 613 aa9.08□□□□□ -0.96
MARK3-212ENST00000558223 SPACA7Q96KW9 195 aa9.08□□□□□ -0.96
MARK3-212ENST00000558223 ZSWIM4Q9H7M6 989 aa9.08□□□□□ -0.96
MARK3-212ENST00000558223 PIK3R4Q99570 1358 aa9.08□□□□□ -0.96
MARK3-212ENST00000558223 KNDC1Q76NI1 1749 aa9.08□□□□□ -0.96
MARK3-212ENST00000558223 CDC42BPGQ6DT37 1551 aa9.07□□□□□ -0.96
MARK3-212ENST00000558223 CPS1P31327 1500 aa9.07□□□□□ -0.96
MARK3-212ENST00000558223 LOC102724159A0A0B4J2E5 919 aa9.07□□□□□ -0.96
MARK3-212ENST00000558223 ANP32AP39687 249 aaKnown RBP9.07□□□□□ -0.96
MARK3-212ENST00000558223 ANAPC15P60006 121 aa9.07□□□□□ -0.96
MARK3-212ENST00000558223 PWP2Q15269 919 aaKnown RBP9.07□□□□□ -0.96
MARK3-212ENST00000558223 ECM1Q16610 540 aa9.07□□□□□ -0.96
MARK3-212ENST00000558223 OCLNQ16625 522 aa9.07□□□□□ -0.96
MARK3-212ENST00000558223 LDLRAD1Q5T700 205 aa9.07□□□□□ -0.96
MARK3-212ENST00000558223 SYMPKQ92797 1274 aaKnown RBP9.07□□□□□ -0.96
MARK3-212ENST00000558223 NUDT16Q96DE0 195 aaKnown RBP9.07□□□□□ -0.96
MARK3-212ENST00000558223 GPATCH3Q96I76 525 aa9.07□□□□□ -0.96
MARK3-212ENST00000558223 COG3Q96JB2 828 aa9.07□□□□□ -0.96
MARK3-212ENST00000558223 CRBNQ96SW2 442 aa9.07□□□□□ -0.96
MARK3-212ENST00000558223 GGNBP2Q9H3C7 697 aa9.07□□□□□ -0.96
MARK3-212ENST00000558223 FKBPLQ9UIM3 349 aa9.07□□□□□ -0.96
MARK3-212ENST00000558223 NOD1Q9Y239 953 aa9.07□□□□□ -0.96
MARK3-212ENST00000558223 DNMT3AQ9Y6K1 912 aaPredicted RBP9.07□□□□□ -0.96
MARK3-212ENST00000558223 IQSEC2Q5JU85 1478 aa9.07□□□□□ -0.96
MARK3-212ENST00000558223 CD163L1Q9NR16 1453 aa9.07□□□□□ -0.96
MARK3-212ENST00000558223 TNNT2P45379 298 aaPredicted RBP9.06□□□□□ -0.96
MARK3-212ENST00000558223 SLC4A3P48751 1232 aa9.06□□□□□ -0.96
MARK3-212ENST00000558223 LAPTM4AQ15012 233 aa9.06□□□□□ -0.96
MARK3-212ENST00000558223 CCDC181Q5TID7 509 aa9.06□□□□□ -0.96
MARK3-212ENST00000558223 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.06□□□□□ -0.96
MARK3-212ENST00000558223 PPIP5K1Q6PFW1 1433 aa9.05□□□□□ -0.96
MARK3-212ENST00000558223 SLIT1O75093 1534 aa9.05□□□□□ -0.96
MARK3-212ENST00000558223 MYO5BQ9ULV0 1848 aa9.05□□□□□ -0.96
MARK3-212ENST00000558223 METP08581 1390 aa9.05□□□□□ -0.96
MARK3-212ENST00000558223 U2SURPO15042 1029 aaKnown RBP9.05□□□□□ -0.96
MARK3-212ENST00000558223 IPO8O15397 1037 aaKnown RBP9.05□□□□□ -0.96
MARK3-212ENST00000558223 SORBS3O60504 671 aa9.05□□□□□ -0.96
MARK3-212ENST00000558223 TMPOP42166 694 aaKnown RBP9.05□□□□□ -0.96
MARK3-212ENST00000558223 MCCD1P59942 119 aaPredicted RBP9.05□□□□□ -0.96
MARK3-212ENST00000558223 FANCCQ00597 558 aa9.05□□□□□ -0.96
MARK3-212ENST00000558223 MTMR3Q13615 1198 aa9.05□□□□□ -0.96
MARK3-212ENST00000558223 TRAF7Q6Q0C0 670 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 209.5 ms