RNA–Protein interactions for RNA: ENST00000557963.1

ALDH1A3-203, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

BASIC

Gene ALDH1A3, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-203ENST00000557963 CCDC85AQ96PX6 553 aaPredicted RBP28.32■■■□□ 2.12
ALDH1A3-203ENST00000557963 PA2G4Q9UQ80 394 aaKnown RBP28.32■■■□□ 2.12
ALDH1A3-203ENST00000557963 NUCB1Q02818 461 aa28.31■■■□□ 2.12
ALDH1A3-203ENST00000557963 MSL1Q68DK7 614 aa28.31■■■□□ 2.12
ALDH1A3-203ENST00000557963 COPRSQ9NQ92 184 aa28.31■■■□□ 2.12
ALDH1A3-203ENST00000557963 MYH3P11055 1940 aa28.3■■■□□ 2.12
ALDH1A3-203ENST00000557963 IFIT5Q13325 482 aaKnown RBP28.3■■■□□ 2.12
ALDH1A3-203ENST00000557963 PRR5LQ6MZQ0 368 aa28.3■■■□□ 2.12
ALDH1A3-203ENST00000557963 ZBTB47Q9UFB7 747 aaPredicted RBP28.3■■■□□ 2.12
ALDH1A3-203ENST00000557963 APBB1O00213 710 aa28.29■■■□□ 2.12
ALDH1A3-203ENST00000557963 RAB11FIP3O75154 756 aa28.29■■■□□ 2.12
ALDH1A3-203ENST00000557963 MMP10P09238 476 aa28.29■■■□□ 2.12
ALDH1A3-203ENST00000557963 PTPN12Q05209 780 aaKnown RBP28.29■■■□□ 2.12
ALDH1A3-203ENST00000557963 CCDC152Q4G0S7 254 aa28.29■■■□□ 2.12
ALDH1A3-203ENST00000557963 KLHDC4Q8TBB5 520 aa28.29■■■□□ 2.12
ALDH1A3-203ENST00000557963 GREM2Q9H772 168 aa28.29■■■□□ 2.12
ALDH1A3-203ENST00000557963 ST5P78524 1137 aa28.29■■■□□ 2.12
ALDH1A3-203ENST00000557963 ITGA6P23229 1130 aa28.28■■■□□ 2.12
ALDH1A3-203ENST00000557963 OS9Q13438 667 aaPredicted RBP28.28■■■□□ 2.12
ALDH1A3-203ENST00000557963 CHD1LQ86WJ1 897 aa28.28■■■□□ 2.12
ALDH1A3-203ENST00000557963 CCDC24Q8N4L8 307 aa28.28■■■□□ 2.12
ALDH1A3-203ENST00000557963 NLRP3Q96P20 1036 aa28.28■■■□□ 2.12
ALDH1A3-203ENST00000557963 PARP3Q9Y6F1 533 aa28.28■■■□□ 2.12
ALDH1A3-203ENST00000557963 G3BP1Q13283 466 aaKnown RBP eCLIP28.27■■■□□ 2.12
ALDH1A3-203ENST00000557963 SLC16A10Q8TF71 515 aa28.27■■■□□ 2.12
ALDH1A3-203ENST00000557963 PDGFDQ9GZP0 370 aaPredicted RBP28.27■■■□□ 2.12
ALDH1A3-203ENST00000557963 SIL1Q9H173 461 aa28.27■■■□□ 2.12
ALDH1A3-203ENST00000557963 ANKRD18BA2A2Z9 1011 aa28.26■■■□□ 2.12
ALDH1A3-203ENST00000557963 SF3B3Q15393 1217 aaKnown RBP28.26■■■□□ 2.12
ALDH1A3-203ENST00000557963 LRRCC1Q9C099 1032 aa28.26■■■□□ 2.12
ALDH1A3-203ENST00000557963 RIC1Q4ADV7 1423 aa28.26■■■□□ 2.11
ALDH1A3-203ENST00000557963 TAF7LQ5H9L4 462 aa28.26■■■□□ 2.11
ALDH1A3-203ENST00000557963 ERC1Q8IUD2 1116 aa28.26■■■□□ 2.11
ALDH1A3-203ENST00000557963 LNPKQ9C0E8 428 aa28.26■■■□□ 2.11
ALDH1A3-203ENST00000557963 RTL9Q8NET4 1388 aa28.25■■■□□ 2.11
ALDH1A3-203ENST00000557963 C3orf67Q6ZVT6 689 aa28.25■■■□□ 2.11
ALDH1A3-203ENST00000557963 KIF1BPQ96EK5 621 aa28.25■■■□□ 2.11
ALDH1A3-203ENST00000557963 SKAP1Q86WV1 359 aa28.24■■■□□ 2.11
ALDH1A3-203ENST00000557963 RHPN1Q8TCX5 695 aa28.23■■■□□ 2.11
ALDH1A3-203ENST00000557963 ZNF594Q96JF6 807 aaPredicted RBP28.23■■■□□ 2.11
ALDH1A3-203ENST00000557963 SMARCA5O60264 1052 aaPredicted RBP28.22■■■□□ 2.11
ALDH1A3-203ENST00000557963 PELP1Q8IZL8 1130 aaKnown RBP28.22■■■□□ 2.11
ALDH1A3-203ENST00000557963 FBXO3Q9UK99 471 aa28.22■■■□□ 2.11
ALDH1A3-203ENST00000557963 NRXN2Q9P2S2 1712 aa28.21■■■□□ 2.11
ALDH1A3-203ENST00000557963 EYA2O00167 538 aa28.2■■■□□ 2.11
ALDH1A3-203ENST00000557963 CIAO1O76071 339 aa28.2■■■□□ 2.11
ALDH1A3-203ENST00000557963 R3HDM1Q15032 1099 aaKnown RBP28.2■■■□□ 2.11
ALDH1A3-203ENST00000557963 RGS3P49796 1198 aa28.19■■■□□ 2.1
ALDH1A3-203ENST00000557963 SEC31BQ9NQW1 1179 aa28.19■■■□□ 2.1
ALDH1A3-203ENST00000557963 TNRC6CQ9HCJ0 1690 aaKnown RBP28.19■■■□□ 2.1
ALDH1A3-203ENST00000557963 CDC5LQ99459 802 aaKnown RBP28.19■■■□□ 2.1
ALDH1A3-203ENST00000557963 BCL11AQ9H165 835 aa28.19■■■□□ 2.1
ALDH1A3-203ENST00000557963 SASH1O94885 1247 aa28.18■■■□□ 2.1
ALDH1A3-203ENST00000557963 IL15P40933 162 aaPredicted RBP28.18■■■□□ 2.1
ALDH1A3-203ENST00000557963 IL1RAPL2Q9NP60 686 aa28.18■■■□□ 2.1
ALDH1A3-203ENST00000557963 PDE4AP27815 886 aa28.17■■■□□ 2.1
ALDH1A3-203ENST00000557963 LDHAL6AQ6ZMR3 332 aa28.17■■■□□ 2.1
ALDH1A3-203ENST00000557963 ATG9AQ7Z3C6 839 aa28.17■■■□□ 2.1
ALDH1A3-203ENST00000557963 BRIP1Q9BX63 1249 aa28.17■■■□□ 2.1
ALDH1A3-203ENST00000557963 LRRC24Q50LG9 513 aa28.16■■■□□ 2.1
ALDH1A3-203ENST00000557963 PUS3Q9BZE2 481 aaKnown RBP28.16■■■□□ 2.1
ALDH1A3-203ENST00000557963 IGHMBP2P38935 993 aaKnown RBP28.16■■■□□ 2.1
ALDH1A3-203ENST00000557963 CRY2Q49AN0 593 aa28.15■■■□□ 2.1
ALDH1A3-203ENST00000557963 DDX46Q7L014 1031 aaKnown RBP28.15■■■□□ 2.1
ALDH1A3-203ENST00000557963 CLASRPQ8N2M8 674 aaKnown RBP28.15■■■□□ 2.1
ALDH1A3-203ENST00000557963 MPHOSPH8Q99549 860 aa28.15■■■□□ 2.1
ALDH1A3-203ENST00000557963 CNNM1Q9NRU3 951 aa28.15■■■□□ 2.1
ALDH1A3-203ENST00000557963 LRP5O75197 1615 aa28.15■■■□□ 2.1
ALDH1A3-203ENST00000557963 CASZ1Q86V15 1759 aa28.15■■■□□ 2.1
ALDH1A3-203ENST00000557963 ANKRD18AQ8IVF6 992 aa28.14■■■□□ 2.1
ALDH1A3-203ENST00000557963 KLRG2A4D1S0 409 aaPredicted RBP28.13■■■□□ 2.09
ALDH1A3-203ENST00000557963 C16orf71Q8IYS4 520 aaPredicted RBP28.13■■■□□ 2.09
ALDH1A3-203ENST00000557963 RPGRQ92834 1020 aaKnown RBP28.13■■■□□ 2.09
ALDH1A3-203ENST00000557963 MTFR1LQ9H019 292 aa28.13■■■□□ 2.09
ALDH1A3-203ENST00000557963 ZBTB7AO95365 584 aa28.13■■■□□ 2.09
ALDH1A3-203ENST00000557963 TFCP2Q12800 502 aa28.13■■■□□ 2.09
ALDH1A3-203ENST00000557963 RIPOR2Q9Y4F9 1068 aa28.13■■■□□ 2.09
ALDH1A3-203ENST00000557963 PDE6BP35913 854 aa28.11■■■□□ 2.09
ALDH1A3-203ENST00000557963 CEP126Q9P2H0 1117 aa28.11■■■□□ 2.09
ALDH1A3-203ENST00000557963 PSDA5PKW4 1024 aaPredicted RBP28.1■■■□□ 2.09
ALDH1A3-203ENST00000557963 CELF1Q92879 486 aaKnown RBP28.1■■■□□ 2.09
ALDH1A3-203ENST00000557963 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.1■■■□□ 2.09
ALDH1A3-203ENST00000557963 MROH5Q6ZUA9 1318 aa28.09■■■□□ 2.09
ALDH1A3-203ENST00000557963 RPS8P62241 208 aaKnown RBP28.09■■■□□ 2.09
ALDH1A3-203ENST00000557963 METTL24Q5JXM2 366 aa28.09■■■□□ 2.09
ALDH1A3-203ENST00000557963 AACSQ86V21 672 aa28.09■■■□□ 2.09
ALDH1A3-203ENST00000557963 OTUD7AQ8TE49 926 aaPredicted RBP28.09■■■□□ 2.09
ALDH1A3-203ENST00000557963 RBM17Q96I25 401 aaKnown RBP28.09■■■□□ 2.09
ALDH1A3-203ENST00000557963 ANKRD31Q8N7Z5 1873 aa28.09■■■□□ 2.09
ALDH1A3-203ENST00000557963 GRAPQ13588 217 aa28.08■■■□□ 2.09
ALDH1A3-203ENST00000557963 PLEKHM2Q8IWE5 1019 aa28.08■■■□□ 2.09
ALDH1A3-203ENST00000557963 GRAPLQ8TC17 118 aaPredicted RBP28.08■■■□□ 2.09
ALDH1A3-203ENST00000557963 BSDC1Q9NW68 430 aaPredicted RBP28.08■■■□□ 2.09
ALDH1A3-203ENST00000557963 IFIT2P09913 472 aaKnown RBP28.07■■■□□ 2.08
ALDH1A3-203ENST00000557963 TNNI3KQ59H18 835 aa28.07■■■□□ 2.08
ALDH1A3-203ENST00000557963 GPR108Q9NPR9 543 aa28.07■■■□□ 2.08
ALDH1A3-203ENST00000557963 ATF5Q9Y2D1 282 aaPredicted RBP28.07■■■□□ 2.08
ALDH1A3-203ENST00000557963 FPGT-TNNI3KV9GXZ4 949 aa28.07■■■□□ 2.08
ALDH1A3-203ENST00000557963 COL4A1P02462 1669 aa28.07■■■□□ 2.08
ALDH1A3-203ENST00000557963 POLD1P28340 1107 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms