RNA–Protein interactions for RNA: ENST00000555462.5

PPP4R3A-208, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3A, Length 3,236 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-208ENST00000555462 MAP4K1Q92918 833 aa20.14■□□□□ 0.82
PPP4R3A-208ENST00000555462 ZSCAN31Q96LW9 406 aaPredicted RBP20.14■□□□□ 0.82
PPP4R3A-208ENST00000555462 DBF4Q9UBU7 674 aaPredicted RBP20.14■□□□□ 0.82
PPP4R3A-208ENST00000555462 GRM8O00222 908 aa20.14■□□□□ 0.81
PPP4R3A-208ENST00000555462 ZNF75DP51815 510 aa20.14■□□□□ 0.81
PPP4R3A-208ENST00000555462 HAND2P61296 217 aa20.14■□□□□ 0.81
PPP4R3A-208ENST00000555462 MTERF4Q7Z6M4 381 aaKnown RBP20.14■□□□□ 0.81
PPP4R3A-208ENST00000555462 TNRQ92752 1358 aa20.14■□□□□ 0.81
PPP4R3A-208ENST00000555462 TMEM2Q9UHN6 1383 aa20.14■□□□□ 0.81
PPP4R3A-208ENST00000555462 POLR3DP05423 398 aaPredicted RBP20.14■□□□□ 0.81
PPP4R3A-208ENST00000555462 RPS6KB1P23443 525 aa20.14■□□□□ 0.81
PPP4R3A-208ENST00000555462 NCBP1Q09161 790 aaKnown RBP20.14■□□□□ 0.81
PPP4R3A-208ENST00000555462 TFCP2Q12800 502 aa20.14■□□□□ 0.81
PPP4R3A-208ENST00000555462 UBE3BQ7Z3V4 1068 aa20.13■□□□□ 0.81
PPP4R3A-208ENST00000555462 ST7Q9NRC1 585 aa20.13■□□□□ 0.81
PPP4R3A-208ENST00000555462 ME1P48163 572 aa20.13■□□□□ 0.81
PPP4R3A-208ENST00000555462 DBNDD2Q9BQY9 259 aa20.13■□□□□ 0.81
PPP4R3A-208ENST00000555462 SNRKQ9NRH2 765 aa20.12■□□□□ 0.81
PPP4R3A-208ENST00000555462 PTPRUQ92729 1446 aa20.12■□□□□ 0.81
PPP4R3A-208ENST00000555462 RIMBP3CA6NJZ7 1639 aa20.12■□□□□ 0.81
PPP4R3A-208ENST00000555462 RIMBP3BA6NNM3 1639 aa20.12■□□□□ 0.81
PPP4R3A-208ENST00000555462 RIMBP3Q9UFD9 1639 aa20.12■□□□□ 0.81
PPP4R3A-208ENST00000555462 COPS6Q7L5N1 327 aa20.12■□□□□ 0.81
PPP4R3A-208ENST00000555462 PPP6R1Q9UPN7 881 aa20.12■□□□□ 0.81
PPP4R3A-208ENST00000555462 CCAR1Q8IX12 1150 aaKnown RBP20.12■□□□□ 0.81
PPP4R3A-208ENST00000555462 CCDC112Q8NEF3 446 aa20.12■□□□□ 0.81
PPP4R3A-208ENST00000555462 KDRP35968 1356 aa20.11■□□□□ 0.81
PPP4R3A-208ENST00000555462 ERICH4A6NGS2 130 aa20.11■□□□□ 0.81
PPP4R3A-208ENST00000555462 PSMA5P28066 241 aa20.11■□□□□ 0.81
PPP4R3A-208ENST00000555462 TIMM10P62072 90 aa20.11■□□□□ 0.81
PPP4R3A-208ENST00000555462 KSR2Q6VAB6 950 aa20.11■□□□□ 0.81
PPP4R3A-208ENST00000555462 XAGE3Q8WTP9 111 aa20.11■□□□□ 0.81
PPP4R3A-208ENST00000555462 TRERF1Q96PN7 1200 aa20.11■□□□□ 0.81
PPP4R3A-208ENST00000555462 ZBTB22O15209 634 aa20.11■□□□□ 0.81
PPP4R3A-208ENST00000555462 RNF20Q5VTR2 975 aa20.11■□□□□ 0.81
PPP4R3A-208ENST00000555462 FAM177A1Q8N128 213 aaPredicted RBP20.11■□□□□ 0.81
PPP4R3A-208ENST00000555462 AOX1Q06278 1338 aa20.11■□□□□ 0.81
PPP4R3A-208ENST00000555462 TTC41PQ6P2S7 1318 aa20.11■□□□□ 0.81
PPP4R3A-208ENST00000555462 A0A1B0GVL5 298 aa20.1■□□□□ 0.81
PPP4R3A-208ENST00000555462 TTLL5Q6EMB2 1281 aa20.1■□□□□ 0.81
PPP4R3A-208ENST00000555462 GIGYF1O75420 1035 aaPredicted RBP20.1■□□□□ 0.81
PPP4R3A-208ENST00000555462 NEK1Q96PY6 1258 aa20.1■□□□□ 0.81
PPP4R3A-208ENST00000555462 GOLPH3LQ9H4A5 285 aa20.1■□□□□ 0.81
PPP4R3A-208ENST00000555462 USP31Q70CQ4 1352 aa20.1■□□□□ 0.81
PPP4R3A-208ENST00000555462 GOLIM4O00461 696 aa20.1■□□□□ 0.81
PPP4R3A-208ENST00000555462 DMTNQ08495 405 aa20.1■□□□□ 0.81
PPP4R3A-208ENST00000555462 GOLGA8FQ08AF8 430 aa20.1■□□□□ 0.81
PPP4R3A-208ENST00000555462 GOLGA8DPQ0D2H9 430 aa20.1■□□□□ 0.81
PPP4R3A-208ENST00000555462 RICTORQ6R327 1708 aa20.1■□□□□ 0.81
PPP4R3A-208ENST00000555462 DBNLQ9UJU6 430 aaKnown RBP20.1■□□□□ 0.81
PPP4R3A-208ENST00000555462 IGKV5-2P06315 115 aa20.09■□□□□ 0.81
PPP4R3A-208ENST00000555462 CYP21A2P08686 494 aa20.09■□□□□ 0.81
PPP4R3A-208ENST00000555462 SCRN1Q12765 414 aa20.09■□□□□ 0.81
PPP4R3A-208ENST00000555462 AOPEPQ8N6M6 819 aa20.09■□□□□ 0.81
PPP4R3A-208ENST00000555462 SKILP12757 684 aa20.09■□□□□ 0.81
PPP4R3A-208ENST00000555462 SCAND2PQ9GZW5 306 aaPredicted RBP20.09■□□□□ 0.81
PPP4R3A-208ENST00000555462 ZNF215Q9UL58 517 aaPredicted RBP20.09■□□□□ 0.81
PPP4R3A-208ENST00000555462 TAF5LO75529 589 aa20.08■□□□□ 0.81
PPP4R3A-208ENST00000555462 USP28Q96RU2 1077 aa20.08■□□□□ 0.81
PPP4R3A-208ENST00000555462 SDF4Q9BRK5 362 aa20.08■□□□□ 0.81
PPP4R3A-208ENST00000555462 NFATC2IPQ8NCF5 419 aa20.08■□□□□ 0.8
PPP4R3A-208ENST00000555462 CLSTN2Q9H4D0 955 aa20.08■□□□□ 0.8
PPP4R3A-208ENST00000555462 TTC21AQ8NDW8 1320 aa20.08■□□□□ 0.8
PPP4R3A-208ENST00000555462 PDCP20941 246 aa20.08■□□□□ 0.8
PPP4R3A-208ENST00000555462 CGNQ9P2M7 1197 aaKnown RBP20.08■□□□□ 0.8
PPP4R3A-208ENST00000555462 ADAMTS13Q76LX8 1427 aa20.07■□□□□ 0.8
PPP4R3A-208ENST00000555462 DDX17Q92841 729 aaKnown RBP20.07■□□□□ 0.8
PPP4R3A-208ENST00000555462 C3P01024 1663 aa20.07■□□□□ 0.8
PPP4R3A-208ENST00000555462 HTATSF1O43719 755 aaKnown RBP20.07■□□□□ 0.8
PPP4R3A-208ENST00000555462 CEP135Q66GS9 1140 aa20.07■□□□□ 0.8
PPP4R3A-208ENST00000555462 STOX1Q6ZVD7 989 aa20.07■□□□□ 0.8
PPP4R3A-208ENST00000555462 ZNF594Q96JF6 807 aaPredicted RBP20.07■□□□□ 0.8
PPP4R3A-208ENST00000555462 COL15A1P39059 1388 aa20.07■□□□□ 0.8
PPP4R3A-208ENST00000555462 SMC2O95347 1197 aa20.06■□□□□ 0.8
PPP4R3A-208ENST00000555462 ORAI2Q96SN7 254 aa20.06■□□□□ 0.8
PPP4R3A-208ENST00000555462 AXIN2Q9Y2T1 843 aa20.06■□□□□ 0.8
PPP4R3A-208ENST00000555462 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.06■□□□□ 0.8
PPP4R3A-208ENST00000555462 NPHP3Q7Z494 1330 aa20.06■□□□□ 0.8
PPP4R3A-208ENST00000555462 RNMTO43148 476 aaKnown RBP20.06■□□□□ 0.8
PPP4R3A-208ENST00000555462 RXRAP19793 462 aa20.06■□□□□ 0.8
PPP4R3A-208ENST00000555462 FSIP1Q8NA03 581 aa20.06■□□□□ 0.8
PPP4R3A-208ENST00000555462 ELF2Q15723 593 aa20.06■□□□□ 0.8
PPP4R3A-208ENST00000555462 LRRN4CLQ8ND94 238 aa20.06■□□□□ 0.8
PPP4R3A-208ENST00000555462 NLRP2Q9NX02 1062 aa20.06■□□□□ 0.8
PPP4R3A-208ENST00000555462 PHF8Q9UPP1 1060 aa20.06■□□□□ 0.8
PPP4R3A-208ENST00000555462 CCDC69A6NI79 296 aa20.05■□□□□ 0.8
PPP4R3A-208ENST00000555462 NRXN3Q9Y4C0 1643 aa20.04■□□□□ 0.8
PPP4R3A-208ENST00000555462 PLEKHO1Q53GL0 409 aaPredicted RBP20.04■□□□□ 0.8
PPP4R3A-208ENST00000555462 NRKQ7Z2Y5 1582 aa20.04■□□□□ 0.8
PPP4R3A-208ENST00000555462 GTF2F1P35269 517 aaKnown RBP eCLIP20.04■□□□□ 0.8
PPP4R3A-208ENST00000555462 SF3A1Q15459 793 aaKnown RBP20.04■□□□□ 0.8
PPP4R3A-208ENST00000555462 TM6SF1Q9BZW5 370 aa20.04■□□□□ 0.8
PPP4R3A-208ENST00000555462 ITSN1Q15811 1721 aa20.04■□□□□ 0.8
PPP4R3A-208ENST00000555462 PTPDC1A2A3K4 754 aa20.03■□□□□ 0.8
PPP4R3A-208ENST00000555462 FKBP4Q02790 459 aaKnown RBP eCLIP20.03■□□□□ 0.8
PPP4R3A-208ENST00000555462 ERC1Q8IUD2 1116 aa20.03■□□□□ 0.8
PPP4R3A-208ENST00000555462 GTF3C6Q969F1 213 aa20.03■□□□□ 0.8
PPP4R3A-208ENST00000555462 KINO60870 393 aaKnown RBP20.03■□□□□ 0.8
PPP4R3A-208ENST00000555462 NEXNQ0ZGT2 675 aa20.03■□□□□ 0.8
PPP4R3A-208ENST00000555462 CCDC73Q6ZRK6 1079 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms