RNA–Protein interactions for RNA: ENST00000553865.1

CCNK-203, Transcript of cyclin K, humanhuman

TSL 1 (best)

Gene CCNK, Length 5,627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-203ENST00000553865 ANKRD18BA2A2Z9 1011 aa10.54□□□□□ -0.72
CCNK-203ENST00000553865 GIGYF2Q6Y7W6 1299 aaKnown RBP10.54□□□□□ -0.72
CCNK-203ENST00000553865 CCDC113Q9H0I3 377 aa10.54□□□□□ -0.72
CCNK-203ENST00000553865 PREX1Q8TCU6 1659 aa10.54□□□□□ -0.72
CCNK-203ENST00000553865 QRICH2Q9H0J4 1663 aa10.54□□□□□ -0.72
CCNK-203ENST00000553865 PTCH1Q13635 1447 aa10.53□□□□□ -0.72
CCNK-203ENST00000553865 NEBLO76041 1014 aa10.53□□□□□ -0.72
CCNK-203ENST00000553865 LTKP29376 864 aa10.53□□□□□ -0.72
CCNK-203ENST00000553865 HOXC9P31274 260 aa10.53□□□□□ -0.72
CCNK-203ENST00000553865 PDE1AP54750 535 aa10.53□□□□□ -0.72
CCNK-203ENST00000553865 C8orf58Q8NAV2 365 aa10.53□□□□□ -0.72
CCNK-203ENST00000553865 ZHX3Q9H4I2 956 aa10.53□□□□□ -0.72
CCNK-203ENST00000553865 ALDH1L1O75891 902 aa10.53□□□□□ -0.72
CCNK-203ENST00000553865 ATP8B2P98198 1209 aa10.53□□□□□ -0.72
CCNK-203ENST00000553865 UVSSAQ2YD98 709 aa10.53□□□□□ -0.72
CCNK-203ENST00000553865 LUZP1Q86V48 1076 aa10.53□□□□□ -0.72
CCNK-203ENST00000553865 SMC5Q8IY18 1101 aa10.53□□□□□ -0.72
CCNK-203ENST00000553865 C8orf76Q96K31 380 aa10.53□□□□□ -0.72
CCNK-203ENST00000553865 NEXMIFQ5QGS0 1516 aa10.53□□□□□ -0.72
CCNK-203ENST00000553865 ZSCAN12O43309 604 aa10.53□□□□□ -0.72
CCNK-203ENST00000553865 GJB2P29033 226 aa10.53□□□□□ -0.72
CCNK-203ENST00000553865 CAMK4Q16566 473 aa10.53□□□□□ -0.72
CCNK-203ENST00000553865 TMOD2Q9NZR1 351 aa10.53□□□□□ -0.72
CCNK-203ENST00000553865 POLR3GO15318 223 aaPredicted RBP10.53□□□□□ -0.72
CCNK-203ENST00000553865 VAMP4O75379 141 aa10.53□□□□□ -0.72
CCNK-203ENST00000553865 PTPN14Q15678 1187 aa10.53□□□□□ -0.72
CCNK-203ENST00000553865 C6orf163Q5TEZ5 329 aa10.53□□□□□ -0.72
CCNK-203ENST00000553865 ZBTB40Q9NUA8 1239 aa10.53□□□□□ -0.72
CCNK-203ENST00000553865 METP08581 1390 aa10.53□□□□□ -0.72
CCNK-203ENST00000553865 PTCD1O75127 700 aaKnown RBP10.52□□□□□ -0.72
CCNK-203ENST00000553865 IL13P35225 146 aa10.52□□□□□ -0.72
CCNK-203ENST00000553865 MAP3K12Q12852 859 aa10.52□□□□□ -0.72
CCNK-203ENST00000553865 DAAM2Q86T65 1068 aa10.52□□□□□ -0.72
CCNK-203ENST00000553865 PHAXQ9H814 394 aaKnown RBP10.52□□□□□ -0.72
CCNK-203ENST00000553865 CDK12Q9NYV4 1490 aaPredicted RBP10.52□□□□□ -0.72
CCNK-203ENST00000553865 GTF2A1P52655 376 aaPredicted RBP10.52□□□□□ -0.73
CCNK-203ENST00000553865 SPECC1LQ69YQ0 1117 aa10.52□□□□□ -0.73
CCNK-203ENST00000553865 DNAJC5Q9H3Z4 198 aa10.52□□□□□ -0.73
CCNK-203ENST00000553865 MNAT1P51948 309 aa10.52□□□□□ -0.73
CCNK-203ENST00000553865 UBE2HP62256 183 aa10.52□□□□□ -0.73
CCNK-203ENST00000553865 IFFO1Q0D2I5 559 aa10.52□□□□□ -0.73
CCNK-203ENST00000553865 RNF123Q5XPI4 1314 aa10.52□□□□□ -0.73
CCNK-203ENST00000553865 KIF18AQ8NI77 898 aa10.52□□□□□ -0.73
CCNK-203ENST00000553865 ESYT1Q9BSJ8 1104 aa10.52□□□□□ -0.73
CCNK-203ENST00000553865 DCTPP1Q9H773 170 aa10.52□□□□□ -0.73
CCNK-203ENST00000553865 EXOC5O00471 708 aa10.52□□□□□ -0.73
CCNK-203ENST00000553865 ZNF213O14771 459 aa10.52□□□□□ -0.73
CCNK-203ENST00000553865 RBM5P52756 815 aaKnown RBP eCLIP10.52□□□□□ -0.73
CCNK-203ENST00000553865 MPNDQ8N594 471 aa10.52□□□□□ -0.73
CCNK-203ENST00000553865 TMX3Q96JJ7 454 aa10.52□□□□□ -0.73
CCNK-203ENST00000553865 NAPBQ9H115 298 aa10.52□□□□□ -0.73
CCNK-203ENST00000553865 SNRPA1P09661 255 aaKnown RBP10.52□□□□□ -0.73
CCNK-203ENST00000553865 SLC5A1P13866 664 aa10.52□□□□□ -0.73
CCNK-203ENST00000553865 TTF1Q15361 905 aaPredicted RBP10.52□□□□□ -0.73
CCNK-203ENST00000553865 CWC25Q9NXE8 425 aaPredicted RBP10.52□□□□□ -0.73
CCNK-203ENST00000553865 TULP4Q9NRJ4 1543 aa10.51□□□□□ -0.73
CCNK-203ENST00000553865 CAVIN2O95810 425 aa10.51□□□□□ -0.73
CCNK-203ENST00000553865 GCP02774 474 aa10.51□□□□□ -0.73
CCNK-203ENST00000553865 RLBP1P12271 317 aa10.51□□□□□ -0.73
CCNK-203ENST00000553865 CCDC85AQ96PX6 553 aaPredicted RBP10.51□□□□□ -0.73
CCNK-203ENST00000553865 CDC42BPGQ6DT37 1551 aa10.51□□□□□ -0.73
CCNK-203ENST00000553865 USP6P35125 1406 aa10.51□□□□□ -0.73
CCNK-203ENST00000553865 DDX23Q9BUQ8 820 aaKnown RBP10.51□□□□□ -0.73
CCNK-203ENST00000553865 RNF41Q9H4P4 317 aaPredicted RBP10.51□□□□□ -0.73
CCNK-203ENST00000553865 POTEB2H3BUK9 544 aa10.51□□□□□ -0.73
CCNK-203ENST00000553865 NEMFO60524 1076 aa10.51□□□□□ -0.73
CCNK-203ENST00000553865 GTF2F1P35269 517 aaKnown RBP eCLIP10.51□□□□□ -0.73
CCNK-203ENST00000553865 CAVIN4Q5BKX8 364 aa10.51□□□□□ -0.73
CCNK-203ENST00000553865 ZNF397Q8NF99 534 aaPredicted RBP10.51□□□□□ -0.73
CCNK-203ENST00000553865 SMARCC1Q92922 1105 aaPredicted RBP10.51□□□□□ -0.73
CCNK-203ENST00000553865 TRERF1Q96PN7 1200 aa10.51□□□□□ -0.73
CCNK-203ENST00000553865 MAP3K19Q56UN5 1328 aa10.51□□□□□ -0.73
CCNK-203ENST00000553865 PPP1R12BO60237 982 aaPredicted RBP10.51□□□□□ -0.73
CCNK-203ENST00000553865 FBLN1P23142 703 aa10.51□□□□□ -0.73
CCNK-203ENST00000553865 ZNF76P36508 570 aa10.51□□□□□ -0.73
CCNK-203ENST00000553865 PCDH11XQ9BZA7 1347 aa10.5□□□□□ -0.73
CCNK-203ENST00000553865 PCDH11YQ9BZA8 1340 aa10.5□□□□□ -0.73
CCNK-203ENST00000553865 ZSCAN29Q8IWY8 852 aaPredicted RBP10.5□□□□□ -0.73
CCNK-203ENST00000553865 NEK1Q96PY6 1258 aa10.5□□□□□ -0.73
CCNK-203ENST00000553865 CLGNO14967 610 aa10.5□□□□□ -0.73
CCNK-203ENST00000553865 EIF5P55010 431 aaKnown RBP10.5□□□□□ -0.73
CCNK-203ENST00000553865 SEPT6Q14141 434 aa10.5□□□□□ -0.73
CCNK-203ENST00000553865 TIGD1Q96MW7 591 aa10.5□□□□□ -0.73
CCNK-203ENST00000553865 KIAA0232Q92628 1395 aa10.5□□□□□ -0.73
CCNK-203ENST00000553865 NUTM2BA6NNL0 878 aaPredicted RBP10.5□□□□□ -0.73
CCNK-203ENST00000553865 NUTM2EB1AL46 878 aaPredicted RBP10.5□□□□□ -0.73
CCNK-203ENST00000553865 KIF5CO60282 957 aa10.5□□□□□ -0.73
CCNK-203ENST00000553865 SFPQP23246 707 aaKnown RBP eCLIP10.5□□□□□ -0.73
CCNK-203ENST00000553865 CASQ1P31415 396 aa10.5□□□□□ -0.73
CCNK-203ENST00000553865 NUTM2AQ8IVF1 878 aaPredicted RBP10.5□□□□□ -0.73
CCNK-203ENST00000553865 DNAI2Q9GZS0 605 aa10.5□□□□□ -0.73
CCNK-203ENST00000553865 SSBP05455 408 aaKnown RBP eCLIP10.5□□□□□ -0.73
CCNK-203ENST00000553865 BMS1Q14692 1282 aaKnown RBP10.5□□□□□ -0.73
CCNK-203ENST00000553865 CFAP100Q494V2 611 aa10.5□□□□□ -0.73
CCNK-203ENST00000553865 IQGAP1P46940 1657 aa10.5□□□□□ -0.73
CCNK-203ENST00000553865 POTEJP0CG39 1038 aa10.49□□□□□ -0.73
CCNK-203ENST00000553865 UBE4AQ14139 1066 aa10.49□□□□□ -0.73
CCNK-203ENST00000553865 TNIP1Q15025 636 aa10.49□□□□□ -0.73
CCNK-203ENST00000553865 SPA17Q15506 151 aa10.49□□□□□ -0.73
CCNK-203ENST00000553865 CEP85Q6P2H3 762 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms