RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 MAP1SQ66K74 1059 aaPredicted RBP12.94□□□□□ -0.34
ACTN1-208ENST00000553370 CCDC146Q8IYE0 955 aa12.94□□□□□ -0.34
ACTN1-208ENST00000553370 SPDYE1Q8NFV5 336 aaPredicted RBP12.94□□□□□ -0.34
ACTN1-208ENST00000553370 CRAMP1Q96RY5 1269 aa12.94□□□□□ -0.34
ACTN1-208ENST00000553370 PASKQ96RG2 1323 aa12.93□□□□□ -0.34
ACTN1-208ENST00000553370 RIOK3O14730 519 aaKnown RBP12.93□□□□□ -0.34
ACTN1-208ENST00000553370 HOXA10P31260 410 aaPredicted RBP12.93□□□□□ -0.34
ACTN1-208ENST00000553370 GRM1Q13255 1194 aa12.93□□□□□ -0.34
ACTN1-208ENST00000553370 ZNF34Q8IZ26 560 aa12.93□□□□□ -0.34
ACTN1-208ENST00000553370 CNTROBQ8N137 903 aa12.93□□□□□ -0.34
ACTN1-208ENST00000553370 SUPT20HQ8NEM7 779 aa12.93□□□□□ -0.34
ACTN1-208ENST00000553370 LTBP1Q14766 1721 aa12.93□□□□□ -0.34
ACTN1-208ENST00000553370 DDX60Q8IY21 1712 aaKnown RBP12.93□□□□□ -0.34
ACTN1-208ENST00000553370 POLR2AP24928 1970 aaKnown RBP12.92□□□□□ -0.34
ACTN1-208ENST00000553370 TMPOP42166 694 aaKnown RBP12.92□□□□□ -0.34
ACTN1-208ENST00000553370 AOC3Q16853 763 aa12.92□□□□□ -0.34
ACTN1-208ENST00000553370 DPP8Q6V1X1 898 aaPredicted RBP12.92□□□□□ -0.34
ACTN1-208ENST00000553370 DDX46Q7L014 1031 aaKnown RBP12.92□□□□□ -0.34
ACTN1-208ENST00000553370 BABAM1Q9NWV8 329 aa12.92□□□□□ -0.34
ACTN1-208ENST00000553370 COL4A5P29400 1685 aa12.92□□□□□ -0.34
ACTN1-208ENST00000553370 ABCC4O15439 1325 aa12.91□□□□□ -0.34
ACTN1-208ENST00000553370 MYBBP1AQ9BQG0 1328 aaKnown RBP12.91□□□□□ -0.34
ACTN1-208ENST00000553370 VEGFBP49765 207 aa12.91□□□□□ -0.34
ACTN1-208ENST00000553370 PROSER3Q2NL68 480 aa12.91□□□□□ -0.34
ACTN1-208ENST00000553370 C3orf67Q6ZVT6 689 aa12.91□□□□□ -0.34
ACTN1-208ENST00000553370 XAGE3Q8WTP9 111 aa12.91□□□□□ -0.34
ACTN1-208ENST00000553370 TRMT112Q9UI30 125 aaKnown RBP12.91□□□□□ -0.34
ACTN1-208ENST00000553370 SH3TC1Q8TE82 1336 aa12.9□□□□□ -0.34
ACTN1-208ENST00000553370 SNED1Q8TER0 1413 aa12.9□□□□□ -0.34
ACTN1-208ENST00000553370 FOXN1O15353 648 aa12.9□□□□□ -0.34
ACTN1-208ENST00000553370 HCLS1P14317 486 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-208ENST00000553370 CTCFP49711 727 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-208ENST00000553370 DEFB115Q30KQ5 88 aa12.9□□□□□ -0.34
ACTN1-208ENST00000553370 HDGFL1Q5TGJ6 251 aa12.9□□□□□ -0.34
ACTN1-208ENST00000553370 COPS6Q7L5N1 327 aa12.9□□□□□ -0.34
ACTN1-208ENST00000553370 REM2Q8IYK8 340 aaPredicted RBP12.9□□□□□ -0.34
ACTN1-208ENST00000553370 BEGAINQ9BUH8 593 aa12.9□□□□□ -0.34
ACTN1-208ENST00000553370 BCL2L13Q9BXK5 485 aa12.9□□□□□ -0.34
ACTN1-208ENST00000553370 ATP6V0A2Q9Y487 856 aa12.9□□□□□ -0.34
ACTN1-208ENST00000553370 MYH3P11055 1940 aa12.9□□□□□ -0.35
ACTN1-208ENST00000553370 LRRC37AA6NMS7 1700 aa12.89□□□□□ -0.35
ACTN1-208ENST00000553370 ITGBL1O95965 494 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-208ENST00000553370 EPS15P42566 896 aa12.89□□□□□ -0.35
ACTN1-208ENST00000553370 DDX10Q13206 875 aaKnown RBP12.89□□□□□ -0.35
ACTN1-208ENST00000553370 USP50Q70EL3 339 aaPredicted RBP12.89□□□□□ -0.35
ACTN1-208ENST00000553370 MPNDQ8N594 471 aa12.89□□□□□ -0.35
ACTN1-208ENST00000553370 ZNF428Q96B54 188 aa12.89□□□□□ -0.35
ACTN1-208ENST00000553370 FAM212AQ96EL1 285 aa12.89□□□□□ -0.35
ACTN1-208ENST00000553370 SPEF2Q9C093 1822 aa12.89□□□□□ -0.35
ACTN1-208ENST00000553370 SCNN1DP51172 638 aa12.88□□□□□ -0.35
ACTN1-208ENST00000553370 NLRP10Q86W26 655 aa12.88□□□□□ -0.35
ACTN1-208ENST00000553370 RUNDC1Q96C34 613 aa12.88□□□□□ -0.35
ACTN1-208ENST00000553370 DDX21Q9NR30 783 aaKnown RBP eCLIP12.88□□□□□ -0.35
ACTN1-208ENST00000553370 CHPF2Q9P2E5 772 aa12.88□□□□□ -0.35
ACTN1-208ENST00000553370 ZNRF3Q9ULT6 936 aa12.88□□□□□ -0.35
ACTN1-208ENST00000553370 BBOX1O75936 387 aa12.87□□□□□ -0.35
ACTN1-208ENST00000553370 ECE1P42892 770 aa12.87□□□□□ -0.35
ACTN1-208ENST00000553370 MAP2K1Q02750 393 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-208ENST00000553370 TCIRG1Q13488 830 aa12.87□□□□□ -0.35
ACTN1-208ENST00000553370 GRAPQ13588 217 aa12.87□□□□□ -0.35
ACTN1-208ENST00000553370 TNIP1Q15025 636 aa12.87□□□□□ -0.35
ACTN1-208ENST00000553370 PDIA6Q15084 440 aa12.87□□□□□ -0.35
ACTN1-208ENST00000553370 CIAPIN1Q6FI81 312 aa12.87□□□□□ -0.35
ACTN1-208ENST00000553370 SLC51AQ86UW1 340 aa12.87□□□□□ -0.35
ACTN1-208ENST00000553370 GRAPLQ8TC17 118 aaPredicted RBP12.87□□□□□ -0.35
ACTN1-208ENST00000553370 VPS33BQ9H267 617 aa12.87□□□□□ -0.35
ACTN1-208ENST00000553370 ADARB2Q9NS39 739 aaKnown RBP12.87□□□□□ -0.35
ACTN1-208ENST00000553370 WDR33Q9C0J8 1336 aaKnown RBP12.87□□□□□ -0.35
ACTN1-208ENST00000553370 RASSF10A6NK89 507 aa12.86□□□□□ -0.35
ACTN1-208ENST00000553370 GMPSP49915 693 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-208ENST00000553370 KRT24Q2M2I5 525 aa12.86□□□□□ -0.35
ACTN1-208ENST00000553370 SLC10A5Q5PT55 438 aa12.86□□□□□ -0.35
ACTN1-208ENST00000553370 TMC4Q7Z404 712 aa12.86□□□□□ -0.35
ACTN1-208ENST00000553370 SP8Q8IXZ3 490 aa12.86□□□□□ -0.35
ACTN1-208ENST00000553370 ZNF408Q9H9D4 720 aa12.86□□□□□ -0.35
ACTN1-208ENST00000553370 GPRC5DQ9NZD1 345 aa12.86□□□□□ -0.35
ACTN1-208ENST00000553370 DBF4Q9UBU7 674 aaPredicted RBP12.86□□□□□ -0.35
ACTN1-208ENST00000553370 CASP8AP2Q9UKL3 1982 aa12.86□□□□□ -0.35
ACTN1-208ENST00000553370 AKAP11Q9UKA4 1901 aa12.86□□□□□ -0.35
ACTN1-208ENST00000553370 THSD7BQ9C0I4 1608 aa12.85□□□□□ -0.35
ACTN1-208ENST00000553370 RAD17O75943 681 aa12.85□□□□□ -0.35
ACTN1-208ENST00000553370 PRR29P0C7W0 189 aa12.85□□□□□ -0.35
ACTN1-208ENST00000553370 LBX1P52954 281 aa12.85□□□□□ -0.35
ACTN1-208ENST00000553370 GOLGA2Q08379 1002 aa12.85□□□□□ -0.35
ACTN1-208ENST00000553370 CAPNS2Q96L46 248 aa12.85□□□□□ -0.35
ACTN1-208ENST00000553370 PRDM10Q9NQV6 1147 aa12.85□□□□□ -0.35
ACTN1-208ENST00000553370 G3V3G9 751 aa12.84□□□□□ -0.35
ACTN1-208ENST00000553370 C6orf229H3BNL8 230 aa12.84□□□□□ -0.35
ACTN1-208ENST00000553370 TRAF5O00463 557 aa12.84□□□□□ -0.35
ACTN1-208ENST00000553370 STK25O00506 426 aa12.84□□□□□ -0.35
ACTN1-208ENST00000553370 HOXB7P09629 217 aa12.84□□□□□ -0.35
ACTN1-208ENST00000553370 CXCL9Q07325 125 aa12.84□□□□□ -0.35
ACTN1-208ENST00000553370 KIAA2012Q0VF49 1180 aa12.84□□□□□ -0.35
ACTN1-208ENST00000553370 RTL5Q5HYW3 569 aaPredicted RBP12.84□□□□□ -0.35
ACTN1-208ENST00000553370 ANKRD13DQ6ZTN6 518 aa12.84□□□□□ -0.35
ACTN1-208ENST00000553370 LRP10Q7Z4F1 713 aa12.84□□□□□ -0.35
ACTN1-208ENST00000553370 PLBD2Q8NHP8 589 aa12.84□□□□□ -0.35
ACTN1-208ENST00000553370 HYPKQ9NX55 129 aa12.84□□□□□ -0.35
ACTN1-208ENST00000553370 CDHR2Q9BYE9 1310 aa12.84□□□□□ -0.35
ACTN1-208ENST00000553370 ATP5J2-PTCD1G3V325 749 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms