RNA–Protein interactions for RNA: ENST00000553334.1

RAD51B-215, Transcript of RAD51 paralog B, humanhuman

TSL 3

Gene RAD51B, Length 249 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-215ENST00000553334 CXCL9Q07325 125 aa8.68□□□□□ -1.02
RAD51B-215ENST00000553334 GRAPQ13588 217 aa8.68□□□□□ -1.02
RAD51B-215ENST00000553334 AOC3Q16853 763 aa8.68□□□□□ -1.02
RAD51B-215ENST00000553334 DPP8Q6V1X1 898 aaPredicted RBP8.68□□□□□ -1.02
RAD51B-215ENST00000553334 NIM1KQ8IY84 436 aa8.68□□□□□ -1.02
RAD51B-215ENST00000553334 GRAPLQ8TC17 118 aaPredicted RBP8.68□□□□□ -1.02
RAD51B-215ENST00000553334 HYPKQ9NX55 129 aa8.68□□□□□ -1.02
RAD51B-215ENST00000553334 ZNRF3Q9ULT6 936 aa8.68□□□□□ -1.02
RAD51B-215ENST00000553334 MYH3P11055 1940 aa8.67□□□□□ -1.02
RAD51B-215ENST00000553334 LMOD1P29536 600 aaPredicted RBP8.67□□□□□ -1.02
RAD51B-215ENST00000553334 VEGFBP49765 207 aa8.67□□□□□ -1.02
RAD51B-215ENST00000553334 GNAI1P63096 354 aa8.67□□□□□ -1.02
RAD51B-215ENST00000553334 TRIM28Q13263 835 aaKnown RBP8.67□□□□□ -1.02
RAD51B-215ENST00000553334 SUPT20HQ8NEM7 779 aa8.67□□□□□ -1.02
RAD51B-215ENST00000553334 PHAXQ9H814 394 aaKnown RBP8.67□□□□□ -1.02
RAD51B-215ENST00000553334 IFT57Q9NWB7 429 aa8.67□□□□□ -1.02
RAD51B-215ENST00000553334 CNTNAP1P78357 1384 aa8.66□□□□□ -1.02
RAD51B-215ENST00000553334 FMR1Q06787 632 aaKnown RBP eCLIP8.66□□□□□ -1.02
RAD51B-215ENST00000553334 SF3B3Q15393 1217 aaKnown RBP8.66□□□□□ -1.02
RAD51B-215ENST00000553334 DEFB115Q30KQ5 88 aa8.66□□□□□ -1.02
RAD51B-215ENST00000553334 CCDC184Q52MB2 194 aa8.66□□□□□ -1.02
RAD51B-215ENST00000553334 RTL5Q5HYW3 569 aaPredicted RBP8.66□□□□□ -1.02
RAD51B-215ENST00000553334 USP50Q70EL3 339 aaPredicted RBP8.66□□□□□ -1.02
RAD51B-215ENST00000553334 C8orf58Q8NAV2 365 aa8.66□□□□□ -1.02
RAD51B-215ENST00000553334 CELF1Q92879 486 aaKnown RBP8.66□□□□□ -1.02
RAD51B-215ENST00000553334 SCN9AQ15858 1988 aa8.66□□□□□ -1.02
RAD51B-215ENST00000553334 LRRC37AA6NMS7 1700 aa8.66□□□□□ -1.02
RAD51B-215ENST00000553334 TNRC18O15417 2968 aaPredicted RBP8.65□□□□□ -1.02
RAD51B-215ENST00000553334 IRS4O14654 1257 aaPredicted RBP8.65□□□□□ -1.02
RAD51B-215ENST00000553334 RAD17O75943 681 aa8.65□□□□□ -1.02
RAD51B-215ENST00000553334 GMPSP49915 693 aaPredicted RBP8.65□□□□□ -1.02
RAD51B-215ENST00000553334 KIAA2012Q0VF49 1180 aa8.65□□□□□ -1.02
RAD51B-215ENST00000553334 TMC4Q7Z404 712 aa8.65□□□□□ -1.02
RAD51B-215ENST00000553334 RIC3Q7Z5B4 369 aa8.65□□□□□ -1.02
RAD51B-215ENST00000553334 TNS4Q8IZW8 715 aa8.65□□□□□ -1.02
RAD51B-215ENST00000553334 ADARB2Q9NS39 739 aaKnown RBP8.65□□□□□ -1.02
RAD51B-215ENST00000553334 GPRC5DQ9NZD1 345 aa8.65□□□□□ -1.02
RAD51B-215ENST00000553334 COL4A1P02462 1669 aa8.65□□□□□ -1.03
RAD51B-215ENST00000553334 CASP8AP2Q9UKL3 1982 aa8.64□□□□□ -1.03
RAD51B-215ENST00000553334 RASSF10A6NK89 507 aa8.64□□□□□ -1.03
RAD51B-215ENST00000553334 YDJCA8MPS7 323 aa8.64□□□□□ -1.03
RAD51B-215ENST00000553334 HIRAP54198 1017 aaPredicted RBP8.64□□□□□ -1.03
RAD51B-215ENST00000553334 RPS8P62241 208 aaKnown RBP8.64□□□□□ -1.03
RAD51B-215ENST00000553334 CALD1Q05682 793 aaKnown RBP8.64□□□□□ -1.03
RAD51B-215ENST00000553334 TNIP1Q15025 636 aa8.64□□□□□ -1.03
RAD51B-215ENST00000553334 WASHC4Q2M389 1173 aa8.64□□□□□ -1.03
RAD51B-215ENST00000553334 CST9Q5W186 159 aa8.64□□□□□ -1.03
RAD51B-215ENST00000553334 CIAPIN1Q6FI81 312 aa8.64□□□□□ -1.03
RAD51B-215ENST00000553334 TSPYL6Q8N831 410 aa8.64□□□□□ -1.03
RAD51B-215ENST00000553334 JARID2Q92833 1246 aaPredicted RBP8.64□□□□□ -1.03
RAD51B-215ENST00000553334 POLLQ9UGP5 575 aa8.64□□□□□ -1.03
RAD51B-215ENST00000553334 NSFL1CQ9UNZ2 370 aaKnown RBP8.64□□□□□ -1.03
RAD51B-215ENST00000553334 TRAF5O00463 557 aa8.63□□□□□ -1.03
RAD51B-215ENST00000553334 RIMBP2O15034 1052 aa8.63□□□□□ -1.03
RAD51B-215ENST00000553334 FOXN1O15353 648 aa8.63□□□□□ -1.03
RAD51B-215ENST00000553334 GPSM2P81274 684 aa8.63□□□□□ -1.03
RAD51B-215ENST00000553334 GOLGA2Q08379 1002 aa8.63□□□□□ -1.03
RAD51B-215ENST00000553334 ZBTB38Q8NAP3 1195 aaPredicted RBP8.63□□□□□ -1.03
RAD51B-215ENST00000553334 MYD88Q99836 296 aa8.63□□□□□ -1.03
RAD51B-215ENST00000553334 SEC31BQ9NQW1 1179 aa8.63□□□□□ -1.03
RAD51B-215ENST00000553334 KCNQ5Q9NR82 932 aa8.63□□□□□ -1.03
RAD51B-215ENST00000553334 WBP1LQ9NX94 342 aa8.63□□□□□ -1.03
RAD51B-215ENST00000553334 PGAP2Q9UHJ9 254 aa8.63□□□□□ -1.03
RAD51B-215ENST00000553334 CNOT7Q9UIV1 285 aaKnown RBP8.63□□□□□ -1.03
RAD51B-215ENST00000553334 ABT1Q9ULW3 272 aaKnown RBP8.63□□□□□ -1.03
RAD51B-215ENST00000553334 DUOX1Q9NRD9 1551 aa8.63□□□□□ -1.03
RAD51B-215ENST00000553334 SPEF2Q9C093 1822 aa8.63□□□□□ -1.03
RAD51B-215ENST00000553334 WDR33Q9C0J8 1336 aaKnown RBP8.62□□□□□ -1.03
RAD51B-215ENST00000553334 PSME4Q14997 1843 aa8.62□□□□□ -1.03
RAD51B-215ENST00000553334 SHTN1A0MZ66 631 aa8.62□□□□□ -1.03
RAD51B-215ENST00000553334 C6orf229H3BNL8 230 aa8.62□□□□□ -1.03
RAD51B-215ENST00000553334 PCCAP05165 728 aaPredicted RBP8.62□□□□□ -1.03
RAD51B-215ENST00000553334 CCDC30Q5VVM6 783 aa8.62□□□□□ -1.03
RAD51B-215ENST00000553334 CCDC191Q8NCU4 936 aa8.62□□□□□ -1.03
RAD51B-215ENST00000553334 TBC1D16Q8TBP0 767 aa8.62□□□□□ -1.03
RAD51B-215ENST00000553334 TSR2Q969E8 191 aaKnown RBP8.62□□□□□ -1.03
RAD51B-215ENST00000553334 METTL22Q9BUU2 404 aaPredicted RBP8.62□□□□□ -1.03
RAD51B-215ENST00000553334 BCL2L13Q9BXK5 485 aa8.62□□□□□ -1.03
RAD51B-215ENST00000553334 DBNDD1Q9H9R9 158 aa8.62□□□□□ -1.03
RAD51B-215ENST00000553334 ZBTB12Q9Y330 459 aaPredicted RBP8.62□□□□□ -1.03
RAD51B-215ENST00000553334 CENPFP49454 3210 aa8.61□□□□□ -1.03
RAD51B-215ENST00000553334 PI4KAP2A4QPH2 592 aa8.61□□□□□ -1.03
RAD51B-215ENST00000553334 PSMD14O00487 310 aa8.61□□□□□ -1.03
RAD51B-215ENST00000553334 PDE8AO60658 829 aa8.61□□□□□ -1.03
RAD51B-215ENST00000553334 CAPN15O75808 1086 aa8.61□□□□□ -1.03
RAD51B-215ENST00000553334 HSP90B1P14625 803 aaKnown RBP8.61□□□□□ -1.03
RAD51B-215ENST00000553334 DOK7Q18PE1 504 aa8.61□□□□□ -1.03
RAD51B-215ENST00000553334 WWC1Q8IX03 1113 aa8.61□□□□□ -1.03
RAD51B-215ENST00000553334 PI4KAP1Q8N8J0 262 aa8.61□□□□□ -1.03
RAD51B-215ENST00000553334 TRPM4Q8TD43 1214 aa8.61□□□□□ -1.03
RAD51B-215ENST00000553334 ZC3H15Q8WU90 426 aaKnown RBP8.61□□□□□ -1.03
RAD51B-215ENST00000553334 DPF2Q92785 391 aa8.61□□□□□ -1.03
RAD51B-215ENST00000553334 GPR101Q96P66 508 aaPredicted RBP8.61□□□□□ -1.03
RAD51B-215ENST00000553334 CCDC85AQ96PX6 553 aaPredicted RBP8.61□□□□□ -1.03
RAD51B-215ENST00000553334 CHMP4AQ9BY43 222 aa8.61□□□□□ -1.03
RAD51B-215ENST00000553334 GLIS2Q9BZE0 524 aaPredicted RBP8.61□□□□□ -1.03
RAD51B-215ENST00000553334 ZC3H12CQ9C0D7 883 aaKnown RBP8.61□□□□□ -1.03
RAD51B-215ENST00000553334 PRDM10Q9NQV6 1147 aa8.61□□□□□ -1.03
RAD51B-215ENST00000553334 CWC25Q9NXE8 425 aaPredicted RBP8.61□□□□□ -1.03
RAD51B-215ENST00000553334 PODXL2Q9NZ53 605 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms