RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 LTBP4Q8N2S1 1624 aa9.91□□□□□ -0.82
CHPT1-208ENST00000552215 HSP90B1P14625 803 aaKnown RBP9.91□□□□□ -0.82
CHPT1-208ENST00000552215 CTSWP56202 376 aa9.91□□□□□ -0.82
CHPT1-208ENST00000552215 HAND2P61296 217 aa9.91□□□□□ -0.82
CHPT1-208ENST00000552215 COL23A1Q86Y22 540 aaPredicted RBP9.91□□□□□ -0.82
CHPT1-208ENST00000552215 EAF2Q96CJ1 260 aaPredicted RBP9.91□□□□□ -0.82
CHPT1-208ENST00000552215 WTIPA6NIX2 430 aaPredicted RBP9.9□□□□□ -0.82
CHPT1-208ENST00000552215 PDE1AP54750 535 aa9.9□□□□□ -0.82
CHPT1-208ENST00000552215 NUCB1Q02818 461 aa9.9□□□□□ -0.82
CHPT1-208ENST00000552215 MIGA1Q8NAN2 632 aa9.9□□□□□ -0.82
CHPT1-208ENST00000552215 NWD1Q149M9 1564 aa9.9□□□□□ -0.82
CHPT1-208ENST00000552215 UFL1O94874 794 aa9.9□□□□□ -0.82
CHPT1-208ENST00000552215 SDSP20132 328 aa9.9□□□□□ -0.82
CHPT1-208ENST00000552215 CELF1Q92879 486 aaKnown RBP9.9□□□□□ -0.82
CHPT1-208ENST00000552215 TCEANC2Q96MN5 208 aa9.9□□□□□ -0.82
CHPT1-208ENST00000552215 UPF3BQ9BZI7 483 aaKnown RBP9.9□□□□□ -0.82
CHPT1-208ENST00000552215 MON2Q7Z3U7 1717 aa9.9□□□□□ -0.82
CHPT1-208ENST00000552215 A0A0G2JLW4 131 aa9.9□□□□□ -0.83
CHPT1-208ENST00000552215 CAVIN4Q5BKX8 364 aa9.9□□□□□ -0.83
CHPT1-208ENST00000552215 ECHDC1Q9NTX5 307 aa9.9□□□□□ -0.83
CHPT1-208ENST00000552215 LRP6O75581 1613 aa9.9□□□□□ -0.83
CHPT1-208ENST00000552215 EYA2O00167 538 aa9.89□□□□□ -0.83
CHPT1-208ENST00000552215 BCAMP50895 628 aa9.89□□□□□ -0.83
CHPT1-208ENST00000552215 RPS8P62241 208 aaKnown RBP9.89□□□□□ -0.83
CHPT1-208ENST00000552215 ZNF827Q17R98 1081 aa9.89□□□□□ -0.83
CHPT1-208ENST00000552215 C2CD5Q86YS7 1000 aa9.89□□□□□ -0.83
CHPT1-208ENST00000552215 VSIG10Q8N0Z9 540 aa9.89□□□□□ -0.83
CHPT1-208ENST00000552215 NYXQ9GZU5 481 aa9.89□□□□□ -0.83
CHPT1-208ENST00000552215 EP400Q96L91 3159 aa9.89□□□□□ -0.83
CHPT1-208ENST00000552215 CDC45O75419 566 aa9.89□□□□□ -0.83
CHPT1-208ENST00000552215 HDAC1Q13547 482 aaPredicted RBP9.89□□□□□ -0.83
CHPT1-208ENST00000552215 CCDC129Q6ZRS4 1044 aa9.89□□□□□ -0.83
CHPT1-208ENST00000552215 RNF123Q5XPI4 1314 aa9.89□□□□□ -0.83
CHPT1-208ENST00000552215 MCCP23508 829 aa9.89□□□□□ -0.83
CHPT1-208ENST00000552215 PARP10Q53GL7 1025 aa9.89□□□□□ -0.83
CHPT1-208ENST00000552215 SLC51AQ86UW1 340 aa9.89□□□□□ -0.83
CHPT1-208ENST00000552215 RAB11FIP4Q86YS3 637 aa9.89□□□□□ -0.83
CHPT1-208ENST00000552215 RGS17Q9UGC6 210 aaPredicted RBP9.89□□□□□ -0.83
CHPT1-208ENST00000552215 NARFQ9UHQ1 456 aa9.89□□□□□ -0.83
CHPT1-208ENST00000552215 KIF1AQ12756 1690 aa9.88□□□□□ -0.83
CHPT1-208ENST00000552215 CHGBP05060 677 aa9.88□□□□□ -0.83
CHPT1-208ENST00000552215 SLC5A1P13866 664 aa9.88□□□□□ -0.83
CHPT1-208ENST00000552215 PLEKHM2Q8IWE5 1019 aa9.88□□□□□ -0.83
CHPT1-208ENST00000552215 ZSCAN29Q8IWY8 852 aaPredicted RBP9.88□□□□□ -0.83
CHPT1-208ENST00000552215 MINDY4BA8MYZ0 360 aa9.88□□□□□ -0.83
CHPT1-208ENST00000552215 H0YIN7 160 aa9.88□□□□□ -0.83
CHPT1-208ENST00000552215 CAMTA2O94983 1202 aa9.88□□□□□ -0.83
CHPT1-208ENST00000552215 TTLL11Q8NHH1 800 aa9.88□□□□□ -0.83
CHPT1-208ENST00000552215 C22orf23Q9BZE7 217 aa9.88□□□□□ -0.83
CHPT1-208ENST00000552215 LTN1O94822 1766 aa9.88□□□□□ -0.83
CHPT1-208ENST00000552215 ATP2B2Q01814 1243 aa9.88□□□□□ -0.83
CHPT1-208ENST00000552215 C3orf67Q6ZVT6 689 aa9.88□□□□□ -0.83
CHPT1-208ENST00000552215 UBN2Q6ZU65 1347 aa9.88□□□□□ -0.83
CHPT1-208ENST00000552215 PCCAP05165 728 aaPredicted RBP9.88□□□□□ -0.83
CHPT1-208ENST00000552215 NLGN1Q8N2Q7 840 aa9.88□□□□□ -0.83
CHPT1-208ENST00000552215 XAGE2Q96GT9 111 aa9.88□□□□□ -0.83
CHPT1-208ENST00000552215 ZC3H12CQ9C0D7 883 aaKnown RBP9.88□□□□□ -0.83
CHPT1-208ENST00000552215 ANO8Q9HCE9 1232 aaPredicted RBP9.88□□□□□ -0.83
CHPT1-208ENST00000552215 GNL3LQ9NVN8 582 aaKnown RBP9.88□□□□□ -0.83
CHPT1-208ENST00000552215 BCL9O00512 1426 aa9.87□□□□□ -0.83
CHPT1-208ENST00000552215 C21orf2O43822 256 aa9.87□□□□□ -0.83
CHPT1-208ENST00000552215 IL15P40933 162 aaPredicted RBP9.87□□□□□ -0.83
CHPT1-208ENST00000552215 PIBF1Q8WXW3 757 aa9.87□□□□□ -0.83
CHPT1-208ENST00000552215 RGPD5Q99666 1765 aa9.87□□□□□ -0.83
CHPT1-208ENST00000552215 RAB11FIP3O75154 756 aa9.87□□□□□ -0.83
CHPT1-208ENST00000552215 AKAP12Q02952 1782 aa9.87□□□□□ -0.83
CHPT1-208ENST00000552215 GLRX3O76003 335 aaKnown RBP9.87□□□□□ -0.83
CHPT1-208ENST00000552215 STK3Q13188 491 aa9.87□□□□□ -0.83
CHPT1-208ENST00000552215 NCBP3Q53F19 620 aaKnown RBP9.87□□□□□ -0.83
CHPT1-208ENST00000552215 TNNI3KQ59H18 835 aa9.87□□□□□ -0.83
CHPT1-208ENST00000552215 HSCBQ8IWL3 235 aa9.87□□□□□ -0.83
CHPT1-208ENST00000552215 SMC5Q8IY18 1101 aa9.87□□□□□ -0.83
CHPT1-208ENST00000552215 NOL10Q9BSC4 688 aaKnown RBP9.87□□□□□ -0.83
CHPT1-208ENST00000552215 AKAP2Q9Y2D5 859 aa9.87□□□□□ -0.83
CHPT1-208ENST00000552215 GJA3Q9Y6H8 435 aa9.87□□□□□ -0.83
CHPT1-208ENST00000552215 FPGT-TNNI3KV9GXZ4 949 aa9.87□□□□□ -0.83
CHPT1-208ENST00000552215 ECM2O94769 699 aaPredicted RBP9.86□□□□□ -0.83
CHPT1-208ENST00000552215 BECN1Q14457 450 aa9.86□□□□□ -0.83
CHPT1-208ENST00000552215 RGPD2P0DJD1 1756 aa9.86□□□□□ -0.83
CHPT1-208ENST00000552215 PTPN12Q05209 780 aaKnown RBP9.86□□□□□ -0.83
CHPT1-208ENST00000552215 CHRNDQ07001 517 aa9.86□□□□□ -0.83
CHPT1-208ENST00000552215 NCAPD2Q15021 1401 aa9.86□□□□□ -0.83
CHPT1-208ENST00000552215 TULP1O00294 542 aaPredicted RBP9.86□□□□□ -0.83
CHPT1-208ENST00000552215 SASH1O94885 1247 aa9.86□□□□□ -0.83
CHPT1-208ENST00000552215 DZIP1Q86YF9 867 aaKnown RBP9.86□□□□□ -0.83
CHPT1-208ENST00000552215 ZNF526Q8TF50 670 aaPredicted RBP9.86□□□□□ -0.83
CHPT1-208ENST00000552215 SEC62Q99442 399 aaKnown RBP9.86□□□□□ -0.83
CHPT1-208ENST00000552215 DBNDD1Q9H9R9 158 aa9.86□□□□□ -0.83
CHPT1-208ENST00000552215 SCAF8Q9UPN6 1271 aaKnown RBP9.86□□□□□ -0.83
CHPT1-208ENST00000552215 NCLP19338 710 aaKnown RBP9.86□□□□□ -0.83
CHPT1-208ENST00000552215 PHKA1P46020 1223 aa9.86□□□□□ -0.83
CHPT1-208ENST00000552215 SLC15A2Q16348 729 aa9.86□□□□□ -0.83
CHPT1-208ENST00000552215 SLC9C2Q5TAH2 1124 aa9.86□□□□□ -0.83
CHPT1-208ENST00000552215 PRPF40BQ6NWY9 871 aaKnown RBP9.86□□□□□ -0.83
CHPT1-208ENST00000552215 PROM2Q8N271 834 aa9.86□□□□□ -0.83
CHPT1-208ENST00000552215 LRRC2Q9BYS8 371 aa9.86□□□□□ -0.83
CHPT1-208ENST00000552215 ANTXR1Q9H6X2 564 aa9.86□□□□□ -0.83
CHPT1-208ENST00000552215 H7C1W4 665 aa9.85□□□□□ -0.83
CHPT1-208ENST00000552215 ZAP70P43403 619 aa9.85□□□□□ -0.83
CHPT1-208ENST00000552215 NEK4P51957 841 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms