RNA–Protein interactions for RNA: ENST00000550385.1

CHPT1-206, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 754 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-206ENST00000550385 FOXO4P98177 505 aa13.2□□□□□ -0.3
CHPT1-206ENST00000550385 SLC10A5Q5PT55 438 aa13.2□□□□□ -0.3
CHPT1-206ENST00000550385 ZBTB47Q9UFB7 747 aaPredicted RBP13.2□□□□□ -0.3
CHPT1-206ENST00000550385 KDM2BQ8NHM5 1336 aa13.19□□□□□ -0.3
CHPT1-206ENST00000550385 SCN7AQ01118 1682 aa13.19□□□□□ -0.3
CHPT1-206ENST00000550385 CSF1RP07333 972 aa13.19□□□□□ -0.3
CHPT1-206ENST00000550385 LMBR1LQ6UX01 489 aa13.19□□□□□ -0.3
CHPT1-206ENST00000550385 PNMA6EA0A0J9YXQ4 647 aa13.18□□□□□ -0.3
CHPT1-206ENST00000550385 RAB11FIP3O75154 756 aa13.18□□□□□ -0.3
CHPT1-206ENST00000550385 SERPINB2P05120 415 aa13.18□□□□□ -0.3
CHPT1-206ENST00000550385 CCDC57Q2TAC2 916 aa13.18□□□□□ -0.3
CHPT1-206ENST00000550385 EPHA10Q5JZY3 1008 aa13.18□□□□□ -0.3
CHPT1-206ENST00000550385 SMC5Q8IY18 1101 aa13.18□□□□□ -0.3
CHPT1-206ENST00000550385 NLRP3Q96P20 1036 aa13.18□□□□□ -0.3
CHPT1-206ENST00000550385 PARP3Q9Y6F1 533 aa13.18□□□□□ -0.3
CHPT1-206ENST00000550385 C4AP0C0L4 1744 aa13.17□□□□□ -0.3
CHPT1-206ENST00000550385 CTSWP56202 376 aa13.17□□□□□ -0.3
CHPT1-206ENST00000550385 ST5P78524 1137 aa13.17□□□□□ -0.3
CHPT1-206ENST00000550385 ERFEQ4G0M1 354 aa13.17□□□□□ -0.3
CHPT1-206ENST00000550385 CCDC152Q4G0S7 254 aa13.17□□□□□ -0.3
CHPT1-206ENST00000550385 CNBD1Q8NA66 436 aa13.17□□□□□ -0.3
CHPT1-206ENST00000550385 TTLL11Q8NHH1 800 aa13.17□□□□□ -0.3
CHPT1-206ENST00000550385 NOP58Q9Y2X3 529 aaKnown RBP13.17□□□□□ -0.3
CHPT1-206ENST00000550385 CHMP3Q9Y3E7 222 aa13.17□□□□□ -0.3
CHPT1-206ENST00000550385 POLRMTO00411 1230 aaKnown RBP13.16□□□□□ -0.3
CHPT1-206ENST00000550385 SURF6O75683 361 aaKnown RBP13.16□□□□□ -0.3
CHPT1-206ENST00000550385 HCLS1P14317 486 aaPredicted RBP13.16□□□□□ -0.3
CHPT1-206ENST00000550385 G3BP1Q13283 466 aaKnown RBP eCLIP13.16□□□□□ -0.3
CHPT1-206ENST00000550385 IFIT5Q13325 482 aaKnown RBP13.16□□□□□ -0.3
CHPT1-206ENST00000550385 SF3B3Q15393 1217 aaKnown RBP13.16□□□□□ -0.3
CHPT1-206ENST00000550385 NUTM1Q86Y26 1132 aa13.16□□□□□ -0.3
CHPT1-206ENST00000550385 ERC1Q8IUD2 1116 aa13.16□□□□□ -0.3
CHPT1-206ENST00000550385 SYNE4Q8N205 404 aa13.16□□□□□ -0.3
CHPT1-206ENST00000550385 COPRSQ9NQ92 184 aa13.16□□□□□ -0.3
CHPT1-206ENST00000550385 FBXO3Q9UK99 471 aa13.16□□□□□ -0.3
CHPT1-206ENST00000550385 QSER1Q2KHR3 1735 aa13.16□□□□□ -0.3
CHPT1-206ENST00000550385 ANKRD18BA2A2Z9 1011 aa13.15□□□□□ -0.3
CHPT1-206ENST00000550385 TAF7LQ5H9L4 462 aa13.15□□□□□ -0.3
CHPT1-206ENST00000550385 ANKRD45Q5TZF3 282 aa13.15□□□□□ -0.3
CHPT1-206ENST00000550385 CLEC11AQ9Y240 323 aa13.15□□□□□ -0.3
CHPT1-206ENST00000550385 MMP10P09238 476 aa13.14□□□□□ -0.31
CHPT1-206ENST00000550385 OS9Q13438 667 aaPredicted RBP13.14□□□□□ -0.31
CHPT1-206ENST00000550385 PRR5LQ6MZQ0 368 aa13.14□□□□□ -0.31
CHPT1-206ENST00000550385 POTEHQ6S545 545 aa13.14□□□□□ -0.31
CHPT1-206ENST00000550385 ILDR2Q71H61 639 aa13.14□□□□□ -0.31
CHPT1-206ENST00000550385 RTL9Q8NET4 1388 aa13.13□□□□□ -0.31
CHPT1-206ENST00000550385 ITGA6P23229 1130 aa13.13□□□□□ -0.31
CHPT1-206ENST00000550385 RFX5P48382 616 aaPredicted RBP13.13□□□□□ -0.31
CHPT1-206ENST00000550385 NUCB1Q02818 461 aa13.13□□□□□ -0.31
CHPT1-206ENST00000550385 PTPN12Q05209 780 aaKnown RBP13.13□□□□□ -0.31
CHPT1-206ENST00000550385 DDR1Q08345 913 aa13.13□□□□□ -0.31
CHPT1-206ENST00000550385 KIF1BPQ96EK5 621 aa13.13□□□□□ -0.31
CHPT1-206ENST00000550385 CDC5LQ99459 802 aaKnown RBP13.13□□□□□ -0.31
CHPT1-206ENST00000550385 LRRCC1Q9C099 1032 aa13.13□□□□□ -0.31
CHPT1-206ENST00000550385 EXOC6BQ9Y2D4 811 aa13.13□□□□□ -0.31
CHPT1-206ENST00000550385 CIAO1O76071 339 aa13.12□□□□□ -0.31
CHPT1-206ENST00000550385 CHD1LQ86WJ1 897 aa13.12□□□□□ -0.31
CHPT1-206ENST00000550385 BRIP1Q9BX63 1249 aa13.12□□□□□ -0.31
CHPT1-206ENST00000550385 GREM2Q9H772 168 aa13.12□□□□□ -0.31
CHPT1-206ENST00000550385 PDZRN3Q9UPQ7 1066 aa13.12□□□□□ -0.31
CHPT1-206ENST00000550385 RIC1Q4ADV7 1423 aa13.12□□□□□ -0.31
CHPT1-206ENST00000550385 TUBGCP6Q96RT7 1819 aa13.11□□□□□ -0.31
CHPT1-206ENST00000550385 COL24A1Q17RW2 1714 aa13.11□□□□□ -0.31
CHPT1-206ENST00000550385 EYA2O00167 538 aa13.11□□□□□ -0.31
CHPT1-206ENST00000550385 PDE6BP35913 854 aa13.11□□□□□ -0.31
CHPT1-206ENST00000550385 IGHMBP2P38935 993 aaKnown RBP13.11□□□□□ -0.31
CHPT1-206ENST00000550385 IL15P40933 162 aaPredicted RBP13.11□□□□□ -0.31
CHPT1-206ENST00000550385 FAM161AQ3B820 660 aa13.11□□□□□ -0.31
CHPT1-206ENST00000550385 MSL1Q68DK7 614 aa13.11□□□□□ -0.31
CHPT1-206ENST00000550385 LDHAL6AQ6ZMR3 332 aa13.11□□□□□ -0.31
CHPT1-206ENST00000550385 DDX46Q7L014 1031 aaKnown RBP13.11□□□□□ -0.31
CHPT1-206ENST00000550385 PELP1Q8IZL8 1130 aaKnown RBP13.11□□□□□ -0.31
CHPT1-206ENST00000550385 RHPN1Q8TCX5 695 aa13.11□□□□□ -0.31
CHPT1-206ENST00000550385 MTFR1LQ9H019 292 aa13.11□□□□□ -0.31
CHPT1-206ENST00000550385 PA2G4Q9UQ80 394 aaKnown RBP13.11□□□□□ -0.31
CHPT1-206ENST00000550385 KLRG2A4D1S0 409 aaPredicted RBP13.1□□□□□ -0.31
CHPT1-206ENST00000550385 POLD1P28340 1107 aa13.1□□□□□ -0.31
CHPT1-206ENST00000550385 R3HDM1Q15032 1099 aaKnown RBP13.1□□□□□ -0.31
CHPT1-206ENST00000550385 CLASRPQ8N2M8 674 aaKnown RBP13.1□□□□□ -0.31
CHPT1-206ENST00000550385 CCDC85AQ96PX6 553 aaPredicted RBP13.1□□□□□ -0.31
CHPT1-206ENST00000550385 MPHOSPH8Q99549 860 aa13.1□□□□□ -0.31
CHPT1-206ENST00000550385 ABCC12Q96J65 1359 aa13.09□□□□□ -0.31
CHPT1-206ENST00000550385 APBB1O00213 710 aa13.09□□□□□ -0.31
CHPT1-206ENST00000550385 ANKRD18AQ8IVF6 992 aa13.09□□□□□ -0.31
CHPT1-206ENST00000550385 RPGRQ92834 1020 aaKnown RBP13.09□□□□□ -0.31
CHPT1-206ENST00000550385 RBM17Q96I25 401 aaKnown RBP13.09□□□□□ -0.31
CHPT1-206ENST00000550385 SIL1Q9H173 461 aa13.09□□□□□ -0.31
CHPT1-206ENST00000550385 CNNM1Q9NRU3 951 aa13.09□□□□□ -0.31
CHPT1-206ENST00000550385 CEP126Q9P2H0 1117 aa13.09□□□□□ -0.31
CHPT1-206ENST00000550385 MYH3P11055 1940 aa13.09□□□□□ -0.31
CHPT1-206ENST00000550385 FXR2P51116 673 aaKnown RBP eCLIP13.08□□□□□ -0.32
CHPT1-206ENST00000550385 RPS8P62241 208 aaKnown RBP13.08□□□□□ -0.32
CHPT1-206ENST00000550385 CRY2Q49AN0 593 aa13.08□□□□□ -0.32
CHPT1-206ENST00000550385 CCDC24Q8N4L8 307 aa13.08□□□□□ -0.32
CHPT1-206ENST00000550385 KLHDC4Q8TBB5 520 aa13.08□□□□□ -0.32
CHPT1-206ENST00000550385 ZNF594Q96JF6 807 aaPredicted RBP13.08□□□□□ -0.32
CHPT1-206ENST00000550385 LNPKQ9C0E8 428 aa13.08□□□□□ -0.32
CHPT1-206ENST00000550385 MROH5Q6ZUA9 1318 aa13.08□□□□□ -0.32
CHPT1-206ENST00000550385 ALDH1B1P30837 517 aa13.07□□□□□ -0.32
CHPT1-206ENST00000550385 HOXA10P31260 410 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms