RNA–Protein interactions for RNA: ENST00000550385.1

CHPT1-206, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 754 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-206ENST00000550385 NISCHQ9Y2I1 1504 aa24.58■■□□□ 1.53
CHPT1-206ENST00000550385 AEBP2Q6ZN18 517 aaPredicted RBP24.27■■□□□ 1.48
CHPT1-206ENST00000550385 CHIC1Q5VXU3 224 aa23.55■■□□□ 1.36
CHPT1-206ENST00000550385 CCDC180Q9P1Z9 1646 aa21.58■■□□□ 1.05
CHPT1-206ENST00000550385 SENP3Q9H4L4 574 aaPredicted RBP20.75■□□□□ 0.91
CHPT1-206ENST00000550385 ABCC9O60706 1549 aa20.66■□□□□ 0.9
CHPT1-206ENST00000550385 PHF23Q9BUL5 403 aaPredicted RBP20.62■□□□□ 0.89
CHPT1-206ENST00000550385 ZCCHC6Q5VYS8 1495 aaKnown RBP20.56■□□□□ 0.88
CHPT1-206ENST00000550385 DCAF8L2P0C7V8 631 aa20.45■□□□□ 0.86
CHPT1-206ENST00000550385 DCAF1Q9Y4B6 1507 aa20.38■□□□□ 0.85
CHPT1-206ENST00000550385 MYO15BQ96JP2 1530 aa20.29■□□□□ 0.84
CHPT1-206ENST00000550385 NACADO15069 1562 aa20.24■□□□□ 0.83
CHPT1-206ENST00000550385 RB1CC1Q8TDY2 1594 aa20.12■□□□□ 0.81
CHPT1-206ENST00000550385 SHROOM4Q9ULL8 1493 aa19.73■□□□□ 0.75
CHPT1-206ENST00000550385 SCRIBQ14160 1630 aa19.72■□□□□ 0.75
CHPT1-206ENST00000550385 UNC13AQ9UPW8 1703 aa19.55■□□□□ 0.72
CHPT1-206ENST00000550385 PABPN1Q86U42 306 aaKnown RBP eCLIP19.44■□□□□ 0.7
CHPT1-206ENST00000550385 BICRAQ9NZM4 1560 aa19.42■□□□□ 0.7
CHPT1-206ENST00000550385 FOXD1Q16676 465 aa19.2■□□□□ 0.66
CHPT1-206ENST00000550385 CECR2Q9BXF3 1484 aa19.07■□□□□ 0.64
CHPT1-206ENST00000550385 PLPPR3Q6T4P5 718 aa19.06■□□□□ 0.64
CHPT1-206ENST00000550385 BAZ1AQ9NRL2 1556 aaPredicted RBP19.03■□□□□ 0.64
CHPT1-206ENST00000550385 SMARCA4P51532 1647 aa18.93■□□□□ 0.62
CHPT1-206ENST00000550385 RSF1Q96T23 1441 aaPredicted RBP18.93■□□□□ 0.62
CHPT1-206ENST00000550385 MROH2BQ7Z745 1585 aa18.93■□□□□ 0.62
CHPT1-206ENST00000550385 SUPT5HO00267 1087 aaKnown RBP18.91■□□□□ 0.62
CHPT1-206ENST00000550385 EIF4G1Q04637 1599 aaKnown RBP18.9■□□□□ 0.62
CHPT1-206ENST00000550385 SMARCA2P51531 1590 aa18.76■□□□□ 0.59
CHPT1-206ENST00000550385 PEG3Q9GZU2 1588 aa18.75■□□□□ 0.59
CHPT1-206ENST00000550385 ATAD2BQ9ULI0 1458 aa18.74■□□□□ 0.59
CHPT1-206ENST00000550385 WIZO95785 1651 aa18.73■□□□□ 0.59
CHPT1-206ENST00000550385 CC2D2AQ9P2K1 1620 aa18.69■□□□□ 0.58
CHPT1-206ENST00000550385 NCAPD3P42695 1498 aa18.68■□□□□ 0.58
CHPT1-206ENST00000550385 BAZ1BQ9UIG0 1483 aaKnown RBP18.62■□□□□ 0.57
CHPT1-206ENST00000550385 TOP2AP11388 1531 aaKnown RBP18.59■□□□□ 0.57
CHPT1-206ENST00000550385 HMGXB3Q12766 1538 aa18.59■□□□□ 0.57
CHPT1-206ENST00000550385 DNAJC5BQ9UF47 199 aa18.5■□□□□ 0.55
CHPT1-206ENST00000550385 CCDC88BA6NC98 1476 aa18.39■□□□□ 0.54
CHPT1-206ENST00000550385 PPP6R1Q9UPN7 881 aa18.25■□□□□ 0.51
CHPT1-206ENST00000550385 ADRA2BP18089 450 aa18.22■□□□□ 0.51
CHPT1-206ENST00000550385 CADPSQ9ULU8 1353 aa18.19■□□□□ 0.5
CHPT1-206ENST00000550385 CFTRP13569 1480 aa18.15■□□□□ 0.5
CHPT1-206ENST00000550385 LAMC3Q9Y6N6 1575 aa18.08■□□□□ 0.48
CHPT1-206ENST00000550385 PIAS4Q8N2W9 510 aaPredicted RBP18.07■□□□□ 0.48
CHPT1-206ENST00000550385 PDS5BQ9NTI5 1447 aa18.01■□□□□ 0.47
CHPT1-206ENST00000550385 NESP48681 1621 aa18■□□□□ 0.47
CHPT1-206ENST00000550385 PRDM2Q13029 1718 aa17.96■□□□□ 0.47
CHPT1-206ENST00000550385 FANCD2Q9BXW9 1451 aa17.94■□□□□ 0.46
CHPT1-206ENST00000550385 MSH5O43196 834 aa17.91■□□□□ 0.46
CHPT1-206ENST00000550385 TRIM41Q8WV44 630 aa17.88■□□□□ 0.45
CHPT1-206ENST00000550385 CEP164Q9UPV0 1460 aa17.87■□□□□ 0.45
CHPT1-206ENST00000550385 WRNQ14191 1432 aaPredicted RBP eCLIP17.86■□□□□ 0.451e-7■■■■■ 66.8
CHPT1-206ENST00000550385 ABCC8Q09428 1581 aa17.82■□□□□ 0.44
CHPT1-206ENST00000550385 ERCC6Q03468 1493 aa17.82■□□□□ 0.44
CHPT1-206ENST00000550385 KIF21AQ7Z4S6 1674 aa17.76■□□□□ 0.43
CHPT1-206ENST00000550385 MRC2Q9UBG0 1479 aa17.72■□□□□ 0.43
CHPT1-206ENST00000550385 TOP2BQ02880 1626 aa17.72■□□□□ 0.43
CHPT1-206ENST00000550385 CUX1P39880 1505 aa17.72■□□□□ 0.43
CHPT1-206ENST00000550385 DNMBPQ6XZF7 1577 aa17.7■□□□□ 0.42
CHPT1-206ENST00000550385 SYNJ1O43426 1573 aa17.7■□□□□ 0.42
CHPT1-206ENST00000550385 TOPBP1Q92547 1522 aa17.69■□□□□ 0.42
CHPT1-206ENST00000550385 BIVM-ERCC5R4GMW8 1640 aa17.69■□□□□ 0.42
CHPT1-206ENST00000550385 URB2Q14146 1524 aaKnown RBP17.68■□□□□ 0.42
CHPT1-206ENST00000550385 WDR62O43379 1518 aa17.62■□□□□ 0.41
CHPT1-206ENST00000550385 FGD5Q6ZNL6 1462 aa17.6■□□□□ 0.41
CHPT1-206ENST00000550385 THOC2Q8NI27 1593 aaKnown RBP17.58■□□□□ 0.41
CHPT1-206ENST00000550385 SOGA1O94964 1423 aa17.57■□□□□ 0.4
CHPT1-206ENST00000550385 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
CHPT1-206ENST00000550385 EEA1Q15075 1411 aa17.51■□□□□ 0.39
CHPT1-206ENST00000550385 IFT140Q96RY7 1462 aa17.49■□□□□ 0.39
CHPT1-206ENST00000550385 RAD54L2Q9Y4B4 1467 aa17.49■□□□□ 0.39
CHPT1-206ENST00000550385 KIF27Q86VH2 1401 aa17.47■□□□□ 0.39
CHPT1-206ENST00000550385 ABCA10Q8WWZ4 1543 aa17.47■□□□□ 0.39
CHPT1-206ENST00000550385 CUX2O14529 1486 aa17.47■□□□□ 0.39
CHPT1-206ENST00000550385 FAM9AQ8IZU1 332 aaPredicted RBP17.45■□□□□ 0.38
CHPT1-206ENST00000550385 CSRNP3Q8WYN3 585 aa17.44■□□□□ 0.38
CHPT1-206ENST00000550385 TARBP1Q13395 1621 aaKnown RBP17.42■□□□□ 0.38
CHPT1-206ENST00000550385 RUSC2Q8N2Y8 1516 aa17.39■□□□□ 0.37
CHPT1-206ENST00000550385 TDRD9Q8NDG6 1382 aaKnown RBP17.39■□□□□ 0.37
CHPT1-206ENST00000550385 WDR97A6NE52 1622 aa17.37■□□□□ 0.37
CHPT1-206ENST00000550385 GAPVD1Q14C86 1478 aa17.36■□□□□ 0.37
CHPT1-206ENST00000550385 IGF1RP08069 1367 aa17.34■□□□□ 0.37
CHPT1-206ENST00000550385 AQRO60306 1485 aaKnown RBP eCLIP17.31■□□□□ 0.361e-7■■■■■ 30.5
CHPT1-206ENST00000550385 ABCA5Q8WWZ7 1642 aa17.3■□□□□ 0.36
CHPT1-206ENST00000550385 ZNF608Q9ULD9 1512 aaPredicted RBP17.3■□□□□ 0.36
CHPT1-206ENST00000550385 ERICH3Q5RHP9 1530 aa17.29■□□□□ 0.36
CHPT1-206ENST00000550385 GRIN2BQ13224 1484 aa17.28■□□□□ 0.36
CHPT1-206ENST00000550385 CARMIL1Q5VZK9 1371 aa17.26■□□□□ 0.35
CHPT1-206ENST00000550385 PRXQ9BXM0 1461 aa17.23■□□□□ 0.35
CHPT1-206ENST00000550385 EIF4G3O43432 1585 aaKnown RBP17.23■□□□□ 0.35
CHPT1-206ENST00000550385 LOC105371045A0A1W2PR82 267 aa17.21■□□□□ 0.35
CHPT1-206ENST00000550385 CUL7Q14999 1698 aa17.2■□□□□ 0.34
CHPT1-206ENST00000550385 KIF21BO75037 1637 aa17.2■□□□□ 0.34
CHPT1-206ENST00000550385 RAPGEF2Q9Y4G8 1499 aa17.19■□□□□ 0.34
CHPT1-206ENST00000550385 FHAD1B1AJZ9 1412 aa17.19■□□□□ 0.34
CHPT1-206ENST00000550385 PBRM1Q86U86 1689 aa17.19■□□□□ 0.34
CHPT1-206ENST00000550385 GOLGA3Q08378 1498 aa17.18■□□□□ 0.34
CHPT1-206ENST00000550385 MAGI1Q96QZ7 1491 aaPredicted RBP17.18■□□□□ 0.34
CHPT1-206ENST00000550385 UBTFP17480 764 aaKnown RBP17.17■□□□□ 0.34
CHPT1-206ENST00000550385 EHMT2Q96KQ7 1210 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms