RNA–Protein interactions for RNA: ENST00000550253.1

TGFBR1-208, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 2 BASIC

Gene TGFBR1, Length 1,538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-208ENST00000550253 COL17A1Q9UMD9 1497 aaPredicted RBP9.03□□□□□ -0.96
TGFBR1-208ENST00000550253 GLI2P10070 1586 aa9.02□□□□□ -0.97
TGFBR1-208ENST00000550253 TNFRSF21O75509 655 aa9.02□□□□□ -0.97
TGFBR1-208ENST00000550253 EPS8L3Q8TE67 593 aaKnown RBP9.02□□□□□ -0.97
TGFBR1-208ENST00000550253 ITPKCQ96DU7 683 aa9.02□□□□□ -0.97
TGFBR1-208ENST00000550253 FOXD3Q9UJU5 478 aaPredicted RBP9.02□□□□□ -0.97
TGFBR1-208ENST00000550253 ASXL2Q76L83 1435 aa9.01□□□□□ -0.97
TGFBR1-208ENST00000550253 MAP3K4Q9Y6R4 1608 aa9.01□□□□□ -0.97
TGFBR1-208ENST00000550253 IRS1P35568 1242 aa9.01□□□□□ -0.97
TGFBR1-208ENST00000550253 MEI1Q5TIA1 1274 aa9.01□□□□□ -0.97
TGFBR1-208ENST00000550253 KLRG1Q96E93 195 aa9.01□□□□□ -0.97
TGFBR1-208ENST00000550253 GRIP2Q9C0E4 1043 aa9.01□□□□□ -0.97
TGFBR1-208ENST00000550253 GGT7Q9UJ14 662 aa9.01□□□□□ -0.97
TGFBR1-208ENST00000550253 TTBK1Q5TCY1 1321 aaPredicted RBP9.01□□□□□ -0.97
TGFBR1-208ENST00000550253 PTPRGP23470 1445 aa9.01□□□□□ -0.97
TGFBR1-208ENST00000550253 KIF27Q86VH2 1401 aa9.01□□□□□ -0.97
TGFBR1-208ENST00000550253 ADGRL1O94910 1474 aa9□□□□□ -0.97
TGFBR1-208ENST00000550253 ALDH1A1P00352 501 aa9□□□□□ -0.97
TGFBR1-208ENST00000550253 TAF1CQ15572 869 aaPredicted RBP9□□□□□ -0.97
TGFBR1-208ENST00000550253 HIF1AQ16665 826 aa9□□□□□ -0.97
TGFBR1-208ENST00000550253 MCF2L2Q86YR7 1114 aa9□□□□□ -0.97
TGFBR1-208ENST00000550253 RHPN1Q8TCX5 695 aa9□□□□□ -0.97
TGFBR1-208ENST00000550253 DISP1Q96F81 1524 aa9□□□□□ -0.97
TGFBR1-208ENST00000550253 IQGAP2Q13576 1575 aa9□□□□□ -0.97
TGFBR1-208ENST00000550253 TLDC2A0PJX2 215 aa9□□□□□ -0.97
TGFBR1-208ENST00000550253 NCLP19338 710 aaKnown RBP9□□□□□ -0.97
TGFBR1-208ENST00000550253 GJA8P48165 433 aa9□□□□□ -0.97
TGFBR1-208ENST00000550253 ST13P50502 369 aaKnown RBP9□□□□□ -0.97
TGFBR1-208ENST00000550253 RELBQ01201 579 aa9□□□□□ -0.97
TGFBR1-208ENST00000550253 IER5Q5VY09 327 aa9□□□□□ -0.97
TGFBR1-208ENST00000550253 SUSD3Q96L08 255 aa9□□□□□ -0.97
TGFBR1-208ENST00000550253 ZNF395Q9H8N7 513 aaPredicted RBP9□□□□□ -0.97
TGFBR1-208ENST00000550253 ZFYVE28Q9HCC9 887 aa9□□□□□ -0.97
TGFBR1-208ENST00000550253 FAM8A1Q9UBU6 413 aa9□□□□□ -0.97
TGFBR1-208ENST00000550253 FGRP09769 529 aa8.99□□□□□ -0.97
TGFBR1-208ENST00000550253 GTF2E1P29083 439 aaPredicted RBP8.99□□□□□ -0.97
TGFBR1-208ENST00000550253 C4orf17Q53FE4 359 aa8.99□□□□□ -0.97
TGFBR1-208ENST00000550253 VPS37DQ86XT2 251 aa8.99□□□□□ -0.97
TGFBR1-208ENST00000550253 ZNF280CQ8ND82 737 aa8.99□□□□□ -0.97
TGFBR1-208ENST00000550253 PMFBP1Q8TBY8 1022 aa8.99□□□□□ -0.97
TGFBR1-208ENST00000550253 HIRIP3Q9BW71 556 aaPredicted RBP8.99□□□□□ -0.97
TGFBR1-208ENST00000550253 PIF1Q9H611 641 aa8.99□□□□□ -0.97
TGFBR1-208ENST00000550253 TMA7Q9Y2S6 64 aaKnown RBP8.99□□□□□ -0.97
TGFBR1-208ENST00000550253 ZCCHC11Q5TAX3 1644 aaKnown RBP8.99□□□□□ -0.97
TGFBR1-208ENST00000550253 ANKRD62A6NC57 917 aa8.98□□□□□ -0.97
TGFBR1-208ENST00000550253 ZIC2O95409 532 aaPredicted RBP8.98□□□□□ -0.97
TGFBR1-208ENST00000550253 GPC1P35052 558 aa8.98□□□□□ -0.97
TGFBR1-208ENST00000550253 PLA2G4AP47712 749 aa8.98□□□□□ -0.97
TGFBR1-208ENST00000550253 IDH3AP50213 366 aa8.98□□□□□ -0.97
TGFBR1-208ENST00000550253 SOGA3Q5TF21 947 aa8.98□□□□□ -0.97
TGFBR1-208ENST00000550253 PDE12Q6L8Q7 609 aaKnown RBP8.98□□□□□ -0.97
TGFBR1-208ENST00000550253 ZNF662Q6ZS27 426 aa8.98□□□□□ -0.97
TGFBR1-208ENST00000550253 ERMP1Q7Z2K6 904 aa8.98□□□□□ -0.97
TGFBR1-208ENST00000550253 SNX29Q8TEQ0 813 aa8.98□□□□□ -0.97
TGFBR1-208ENST00000550253 ZFAND3Q9H8U3 227 aa8.98□□□□□ -0.97
TGFBR1-208ENST00000550253 ZDHHC3Q9NYG2 299 aa8.98□□□□□ -0.97
TGFBR1-208ENST00000550253 WASF2Q9Y6W5 498 aa8.98□□□□□ -0.97
TGFBR1-208ENST00000550253 CARMIL1Q5VZK9 1371 aa8.98□□□□□ -0.97
TGFBR1-208ENST00000550253 TNIKQ9UKE5 1360 aa8.98□□□□□ -0.97
TGFBR1-208ENST00000550253 UHRF1BP1LA0JNW5 1464 aa8.98□□□□□ -0.97
TGFBR1-208ENST00000550253 ATF4P18848 351 aaPredicted RBP8.97□□□□□ -0.97
TGFBR1-208ENST00000550253 INPP5BP32019 993 aa8.97□□□□□ -0.97
TGFBR1-208ENST00000550253 TRIP4Q15650 581 aaPredicted RBP8.97□□□□□ -0.97
TGFBR1-208ENST00000550253 GNASQ5JWF2 1037 aa8.97□□□□□ -0.97
TGFBR1-208ENST00000550253 USP20Q9Y2K6 914 aa8.97□□□□□ -0.97
TGFBR1-208ENST00000550253 V9GY48 417 aaPredicted RBP8.97□□□□□ -0.97
TGFBR1-208ENST00000550253 EPRSP07814 1512 aaKnown RBP8.97□□□□□ -0.97
TGFBR1-208ENST00000550253 HECW2Q9P2P5 1572 aa8.97□□□□□ -0.97
TGFBR1-208ENST00000550253 USP17L7P0C7H9 530 aa8.96□□□□□ -0.97
TGFBR1-208ENST00000550253 PAK2Q13177 524 aa8.96□□□□□ -0.97
TGFBR1-208ENST00000550253 ZNF438Q7Z4V0 828 aa8.96□□□□□ -0.97
TGFBR1-208ENST00000550253 SRCIN1Q9C0H9 1055 aa8.96□□□□□ -0.97
TGFBR1-208ENST00000550253 FNDC3AQ9Y2H6 1198 aaKnown RBP8.96□□□□□ -0.97
TGFBR1-208ENST00000550253 GPC6Q9Y625 555 aaPredicted RBP8.96□□□□□ -0.97
TGFBR1-208ENST00000550253 KCNMB2Q9Y691 235 aa8.96□□□□□ -0.97
TGFBR1-208ENST00000550253 PLB1Q6P1J6 1458 aa8.96□□□□□ -0.97
TGFBR1-208ENST00000550253 KDM5BQ9UGL1 1544 aa8.96□□□□□ -0.97
TGFBR1-208ENST00000550253 SLC19A1P41440 591 aa8.95□□□□□ -0.98
TGFBR1-208ENST00000550253 RNF144AP50876 292 aaPredicted RBP8.95□□□□□ -0.98
TGFBR1-208ENST00000550253 NBPF1Q3BBV0 1214 aa8.95□□□□□ -0.98
TGFBR1-208ENST00000550253 AIDAQ96BJ3 306 aa8.95□□□□□ -0.98
TGFBR1-208ENST00000550253 HSH2DQ96JZ2 352 aa8.95□□□□□ -0.98
TGFBR1-208ENST00000550253 UACAQ9BZF9 1416 aa8.95□□□□□ -0.98
TGFBR1-208ENST00000550253 NPHS2Q9NP85 383 aa8.95□□□□□ -0.98
TGFBR1-208ENST00000550253 HCSTQ9UBK5 93 aa8.95□□□□□ -0.98
TGFBR1-208ENST00000550253 RTCBQ9Y3I0 505 aaKnown RBP8.95□□□□□ -0.98
TGFBR1-208ENST00000550253 TBX22Q9Y458 520 aa8.95□□□□□ -0.98
TGFBR1-208ENST00000550253 KIAA0556O60303 1618 aa8.95□□□□□ -0.98
TGFBR1-208ENST00000550253 CARMIL2Q6F5E8 1435 aa8.95□□□□□ -0.98
TGFBR1-208ENST00000550253 POTECB2RU33 542 aa8.95□□□□□ -0.98
TGFBR1-208ENST00000550253 TIMP2P16035 220 aa8.95□□□□□ -0.98
TGFBR1-208ENST00000550253 ARSDP51689 593 aa8.95□□□□□ -0.98
TGFBR1-208ENST00000550253 WDR4P57081 412 aaKnown RBP8.95□□□□□ -0.98
TGFBR1-208ENST00000550253 SLC27A3Q5K4L6 730 aa8.95□□□□□ -0.98
TGFBR1-208ENST00000550253 NXPE4Q6UWF7 544 aa8.95□□□□□ -0.98
TGFBR1-208ENST00000550253 ZSWIM4Q9H7M6 989 aa8.95□□□□□ -0.98
TGFBR1-208ENST00000550253 ELP3Q9H9T3 547 aa8.95□□□□□ -0.98
TGFBR1-208ENST00000550253 COPRSQ9NQ92 184 aa8.95□□□□□ -0.98
TGFBR1-208ENST00000550253 TMEM63CQ9P1W3 806 aa8.95□□□□□ -0.98
TGFBR1-208ENST00000550253 PHACTR2O75167 634 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms