RNA–Protein interactions for RNA: ENST00000549613.1

CALCOCO1-214, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 884 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-214ENST00000549613 RBM19Q9Y4C8 960 aaKnown RBP16.82■□□□□ 0.28
CALCOCO1-214ENST00000549613 SALL3Q9BXA9 1300 aa16.81■□□□□ 0.28
CALCOCO1-214ENST00000549613 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.81■□□□□ 0.28
CALCOCO1-214ENST00000549613 ANKRD18BA2A2Z9 1011 aa16.81■□□□□ 0.28
CALCOCO1-214ENST00000549613 FAM177BA6PVY3 158 aa16.81■□□□□ 0.28
CALCOCO1-214ENST00000549613 EYA2O00167 538 aa16.81■□□□□ 0.28
CALCOCO1-214ENST00000549613 PHF14O94880 888 aa16.81■□□□□ 0.28
CALCOCO1-214ENST00000549613 IFIT2P09913 472 aaKnown RBP16.81■□□□□ 0.28
CALCOCO1-214ENST00000549613 TBC1D9BQ66K14 1250 aa16.81■□□□□ 0.28
CALCOCO1-214ENST00000549613 SYNE4Q8N205 404 aa16.81■□□□□ 0.28
CALCOCO1-214ENST00000549613 FLAD1Q8NFF5 587 aa16.81■□□□□ 0.28
CALCOCO1-214ENST00000549613 KLHDC4Q8TBB5 520 aa16.81■□□□□ 0.28
CALCOCO1-214ENST00000549613 SCN7AQ01118 1682 aa16.81■□□□□ 0.28
CALCOCO1-214ENST00000549613 GTF2E1P29083 439 aaPredicted RBP16.8■□□□□ 0.28
CALCOCO1-214ENST00000549613 SLC10A5Q5PT55 438 aa16.8■□□□□ 0.28
CALCOCO1-214ENST00000549613 TPTE2Q6XPS3 522 aa16.8■□□□□ 0.28
CALCOCO1-214ENST00000549613 BICDL1Q6ZP65 573 aa16.8■□□□□ 0.28
CALCOCO1-214ENST00000549613 TTC41PQ6P2S7 1318 aa16.79■□□□□ 0.28
CALCOCO1-214ENST00000549613 CCDC152Q4G0S7 254 aa16.79■□□□□ 0.28
CALCOCO1-214ENST00000549613 SMIM5Q71RC9 77 aa16.79■□□□□ 0.28
CALCOCO1-214ENST00000549613 AACSQ86V21 672 aa16.79■□□□□ 0.28
CALCOCO1-214ENST00000549613 NUTM1Q86Y26 1132 aa16.79■□□□□ 0.28
CALCOCO1-214ENST00000549613 GPR108Q9NPR9 543 aa16.79■□□□□ 0.28
CALCOCO1-214ENST00000549613 ERC2O15083 957 aa16.78■□□□□ 0.28
CALCOCO1-214ENST00000549613 ITGA6P23229 1130 aa16.78■□□□□ 0.28
CALCOCO1-214ENST00000549613 NBPF5PQ86XG9 351 aaPredicted RBP16.78■□□□□ 0.28
CALCOCO1-214ENST00000549613 MYH3P11055 1940 aa16.77■□□□□ 0.28
CALCOCO1-214ENST00000549613 HCLS1P14317 486 aaPredicted RBP16.77■□□□□ 0.28
CALCOCO1-214ENST00000549613 TFCP2Q12800 502 aa16.77■□□□□ 0.28
CALCOCO1-214ENST00000549613 ATG9AQ7Z3C6 839 aa16.77■□□□□ 0.28
CALCOCO1-214ENST00000549613 AMIGO3Q86WK7 504 aa16.77■□□□□ 0.28
CALCOCO1-214ENST00000549613 GREM2Q9H772 168 aa16.77■□□□□ 0.28
CALCOCO1-214ENST00000549613 ECHDC1Q9NTX5 307 aa16.77■□□□□ 0.28
CALCOCO1-214ENST00000549613 TFCP2L1Q9NZI6 479 aa16.77■□□□□ 0.28
CALCOCO1-214ENST00000549613 CEP126Q9P2H0 1117 aa16.77■□□□□ 0.28
CALCOCO1-214ENST00000549613 UBR3Q6ZT12 1888 aa16.77■□□□□ 0.27
CALCOCO1-214ENST00000549613 RGPD3A6NKT7 1758 aaPredicted RBP16.77■□□□□ 0.27
CALCOCO1-214ENST00000549613 RGPD4Q7Z3J3 1758 aa16.77■□□□□ 0.27
CALCOCO1-214ENST00000549613 RTL9Q8NET4 1388 aa16.77■□□□□ 0.27
CALCOCO1-214ENST00000549613 CDC45O75419 566 aa16.76■□□□□ 0.27
CALCOCO1-214ENST00000549613 GLRX3O76003 335 aaKnown RBP16.76■□□□□ 0.27
CALCOCO1-214ENST00000549613 GSPT1P15170 499 aaKnown RBP16.76■□□□□ 0.27
CALCOCO1-214ENST00000549613 ERFEQ4G0M1 354 aa16.76■□□□□ 0.27
CALCOCO1-214ENST00000549613 CASC1Q6TDU7 716 aa16.76■□□□□ 0.27
CALCOCO1-214ENST00000549613 AKT1S1Q96B36 256 aa16.76■□□□□ 0.27
CALCOCO1-214ENST00000549613 EAF2Q96CJ1 260 aaPredicted RBP16.76■□□□□ 0.27
CALCOCO1-214ENST00000549613 ZNF594Q96JF6 807 aaPredicted RBP16.76■□□□□ 0.27
CALCOCO1-214ENST00000549613 CCDC85AQ96PX6 553 aaPredicted RBP16.76■□□□□ 0.27
CALCOCO1-214ENST00000549613 UPF2Q9HAU5 1272 aaKnown RBP16.76■□□□□ 0.27
CALCOCO1-214ENST00000549613 AKAP2Q9Y2D5 859 aa16.76■□□□□ 0.27
CALCOCO1-214ENST00000549613 SDSP20132 328 aa16.75■□□□□ 0.27
CALCOCO1-214ENST00000549613 BAG6P46379 1132 aa16.75■□□□□ 0.27
CALCOCO1-214ENST00000549613 R3HDM1Q15032 1099 aaKnown RBP16.75■□□□□ 0.27
CALCOCO1-214ENST00000549613 SF3B3Q15393 1217 aaKnown RBP16.75■□□□□ 0.27
CALCOCO1-214ENST00000549613 TNNI3KQ59H18 835 aa16.75■□□□□ 0.27
CALCOCO1-214ENST00000549613 LDHAL6AQ6ZMR3 332 aa16.75■□□□□ 0.27
CALCOCO1-214ENST00000549613 FPGT-TNNI3KV9GXZ4 949 aa16.75■□□□□ 0.27
CALCOCO1-214ENST00000549613 TNS1Q9HBL0 1735 aaKnown RBP16.75■□□□□ 0.27
CALCOCO1-214ENST00000549613 CARMIL3Q8ND23 1372 aa16.75■□□□□ 0.27
CALCOCO1-214ENST00000549613 NPHP1O15259 732 aa16.74■□□□□ 0.27
CALCOCO1-214ENST00000549613 GYS1P13807 737 aa16.74■□□□□ 0.27
CALCOCO1-214ENST00000549613 NFIXQ14938 502 aa16.74■□□□□ 0.27
CALCOCO1-214ENST00000549613 NLRP3Q96P20 1036 aa16.74■□□□□ 0.27
CALCOCO1-214ENST00000549613 CCDC8Q9H0W5 538 aaPredicted RBP16.74■□□□□ 0.27
CALCOCO1-214ENST00000549613 C4AP0C0L4 1744 aa16.73■□□□□ 0.27
CALCOCO1-214ENST00000549613 IGHMBP2P38935 993 aaKnown RBP16.73■□□□□ 0.27
CALCOCO1-214ENST00000549613 LRRC24Q50LG9 513 aa16.73■□□□□ 0.27
CALCOCO1-214ENST00000549613 NLGN1Q8N2Q7 840 aa16.73■□□□□ 0.27
CALCOCO1-214ENST00000549613 CAMKK2Q96RR4 588 aa16.73■□□□□ 0.27
CALCOCO1-214ENST00000549613 CDC5LQ99459 802 aaKnown RBP16.73■□□□□ 0.27
CALCOCO1-214ENST00000549613 PUS3Q9BZE2 481 aaKnown RBP16.73■□□□□ 0.27
CALCOCO1-214ENST00000549613 CNNM1Q9NRU3 951 aa16.73■□□□□ 0.27
CALCOCO1-214ENST00000549613 RIPOR2Q9Y4F9 1068 aa16.73■□□□□ 0.27
CALCOCO1-214ENST00000549613 LAMB2P55268 1798 aa16.72■□□□□ 0.27
CALCOCO1-214ENST00000549613 TRIM6-TRIM34B2RNG4 842 aa16.72■□□□□ 0.27
CALCOCO1-214ENST00000549613 TM4SF1P30408 202 aa16.72■□□□□ 0.27
CALCOCO1-214ENST00000549613 ZNF827Q17R98 1081 aa16.72■□□□□ 0.27
CALCOCO1-214ENST00000549613 PI4K2BQ8TCG2 481 aa16.72■□□□□ 0.27
CALCOCO1-214ENST00000549613 MPHOSPH8Q99549 860 aa16.72■□□□□ 0.27
CALCOCO1-214ENST00000549613 COL24A1Q17RW2 1714 aa16.72■□□□□ 0.27
CALCOCO1-214ENST00000549613 MROH5Q6ZUA9 1318 aa16.71■□□□□ 0.27
CALCOCO1-214ENST00000549613 DDX60Q8IY21 1712 aaKnown RBP16.71■□□□□ 0.27
CALCOCO1-214ENST00000549613 DCAF8L1A6NGE4 600 aa16.71■□□□□ 0.27
CALCOCO1-214ENST00000549613 METTL24Q5JXM2 366 aa16.71■□□□□ 0.27
CALCOCO1-214ENST00000549613 CNTROBQ8N137 903 aa16.71■□□□□ 0.27
CALCOCO1-214ENST00000549613 NEUROD6Q96NK8 337 aa16.71■□□□□ 0.27
CALCOCO1-214ENST00000549613 STK32BQ9NY57 414 aa16.71■□□□□ 0.27
CALCOCO1-214ENST00000549613 MSH5O43196 834 aa16.7■□□□□ 0.26
CALCOCO1-214ENST00000549613 EN1Q05925 392 aaPredicted RBP16.7■□□□□ 0.26
CALCOCO1-214ENST00000549613 EZH2Q15910 746 aaKnown RBP16.7■□□□□ 0.26
CALCOCO1-214ENST00000549613 TSHZ3Q63HK5 1081 aa16.7■□□□□ 0.26
CALCOCO1-214ENST00000549613 TBC1D9Q6ZT07 1266 aa16.7■□□□□ 0.26
CALCOCO1-214ENST00000549613 COL23A1Q86Y22 540 aaPredicted RBP16.7■□□□□ 0.26
CALCOCO1-214ENST00000549613 CNBD1Q8NA66 436 aa16.7■□□□□ 0.26
CALCOCO1-214ENST00000549613 RILPL2Q969X0 211 aa16.7■□□□□ 0.26
CALCOCO1-214ENST00000549613 SERPINB2P05120 415 aa16.69■□□□□ 0.26
CALCOCO1-214ENST00000549613 ATP5JP18859 108 aa16.69■□□□□ 0.26
CALCOCO1-214ENST00000549613 ANP32AP39687 249 aaKnown RBP16.69■□□□□ 0.26
CALCOCO1-214ENST00000549613 ST5P78524 1137 aa16.69■□□□□ 0.26
CALCOCO1-214ENST00000549613 ANKRD18AQ8IVF6 992 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms