RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 ZCRB1Q8TBF4 217 aaKnown RBP17.69■□□□□ 0.42
DDX55-209ENST00000542286 ZNF335Q9H4Z2 1342 aaPredicted RBP17.69■□□□□ 0.42
DDX55-209ENST00000542286 LRRC2Q9BYS8 371 aa17.69■□□□□ 0.42
DDX55-209ENST00000542286 CYP46A1Q9Y6A2 500 aa17.69■□□□□ 0.42
DDX55-209ENST00000542286 VPS37CA5D8V6 355 aaPredicted RBP17.68■□□□□ 0.42
DDX55-209ENST00000542286 MAP7D2Q96T17 732 aa17.68■□□□□ 0.42
DDX55-209ENST00000542286 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.68■□□□□ 0.424e-6■□□□□ 9.3
DDX55-209ENST00000542286 CRYBG1Q9Y4K1 1723 aa17.68■□□□□ 0.42
DDX55-209ENST00000542286 A0A0G2JLW4 131 aa17.68■□□□□ 0.42
DDX55-209ENST00000542286 STX6O43752 255 aa17.68■□□□□ 0.42
DDX55-209ENST00000542286 MAP4K1Q92918 833 aa17.68■□□□□ 0.42
DDX55-209ENST00000542286 ZSWIM6Q9HCJ5 1215 aa17.68■□□□□ 0.42
DDX55-209ENST00000542286 WDR33Q9C0J8 1336 aaKnown RBP17.68■□□□□ 0.42
DDX55-209ENST00000542286 LRRC24Q50LG9 513 aa17.68■□□□□ 0.42
DDX55-209ENST00000542286 CASP7P55210 303 aa17.67■□□□□ 0.42
DDX55-209ENST00000542286 PUS3Q9BZE2 481 aaKnown RBP17.67■□□□□ 0.42
DDX55-209ENST00000542286 ZSCAN22P10073 491 aaPredicted RBP17.67■□□□□ 0.42
DDX55-209ENST00000542286 COPRSQ9NQ92 184 aa17.67■□□□□ 0.42
DDX55-209ENST00000542286 HDAC5Q9UQL6 1122 aa17.67■□□□□ 0.42
DDX55-209ENST00000542286 ZKSCAN1P17029 563 aaPredicted RBP17.66■□□□□ 0.42
DDX55-209ENST00000542286 DNM1Q05193 864 aaKnown RBP17.66■□□□□ 0.42
DDX55-209ENST00000542286 SYNE4Q8N205 404 aa17.66■□□□□ 0.42
DDX55-209ENST00000542286 PLBD2Q8NHP8 589 aa17.66■□□□□ 0.42
DDX55-209ENST00000542286 AFDNP55196 1824 aaKnown RBP17.66■□□□□ 0.42
DDX55-209ENST00000542286 FOXO4P98177 505 aa17.66■□□□□ 0.42
DDX55-209ENST00000542286 WDR17Q8IZU2 1322 aa17.65■□□□□ 0.42
DDX55-209ENST00000542286 LRSAM1Q6UWE0 723 aa17.65■□□□□ 0.42
DDX55-209ENST00000542286 VPS53Q5VIR6 699 aa17.64■□□□□ 0.41
DDX55-209ENST00000542286 GOLIM4O00461 696 aa17.64■□□□□ 0.41
DDX55-209ENST00000542286 TAF5LO75529 589 aa17.64■□□□□ 0.41
DDX55-209ENST00000542286 FOSBP53539 338 aa17.64■□□□□ 0.41
DDX55-209ENST00000542286 SLAIN2Q9P270 581 aa17.64■□□□□ 0.41
DDX55-209ENST00000542286 NOL7Q9UMY1 257 aaKnown RBP17.64■□□□□ 0.41
DDX55-209ENST00000542286 F13A1P00488 732 aa17.63■□□□□ 0.41
DDX55-209ENST00000542286 RABL6Q3YEC7 729 aaPredicted RBP17.63■□□□□ 0.41
DDX55-209ENST00000542286 HS1BP3Q53T59 392 aa17.63■□□□□ 0.41
DDX55-209ENST00000542286 MTMR6Q9Y217 621 aa17.63■□□□□ 0.41
DDX55-209ENST00000542286 UQCRHLA0A096LP55 91 aa17.63■□□□□ 0.41
DDX55-209ENST00000542286 UQCRHP07919 91 aa17.63■□□□□ 0.41
DDX55-209ENST00000542286 EVA1CP58658 441 aa17.63■□□□□ 0.41
DDX55-209ENST00000542286 ATG9AQ7Z3C6 839 aa17.63■□□□□ 0.41
DDX55-209ENST00000542286 SNRKQ9NRH2 765 aa17.63■□□□□ 0.41
DDX55-209ENST00000542286 ASAP1Q9ULH1 1129 aa17.63■□□□□ 0.41
DDX55-209ENST00000542286 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.63■□□□□ 0.41
DDX55-209ENST00000542286 ZNF609O15014 1411 aa17.63■□□□□ 0.41
DDX55-209ENST00000542286 ARFGEF2Q9Y6D5 1785 aa17.63■□□□□ 0.41
DDX55-209ENST00000542286 MED23Q9ULK4 1368 aa17.63■□□□□ 0.41
DDX55-209ENST00000542286 HSP90AB3PQ58FF7 597 aa17.62■□□□□ 0.41
DDX55-209ENST00000542286 GLI3P10071 1580 aa17.62■□□□□ 0.41
DDX55-209ENST00000542286 ZNF500O60304 480 aaPredicted RBP17.62■□□□□ 0.41
DDX55-209ENST00000542286 TOB2Q14106 344 aaPredicted RBP17.62■□□□□ 0.41
DDX55-209ENST00000542286 BLOC1S2Q6QNY1 142 aa17.62■□□□□ 0.41
DDX55-209ENST00000542286 CDC37L1Q7L3B6 337 aa17.62■□□□□ 0.41
DDX55-209ENST00000542286 PCDH11XQ9BZA7 1347 aa17.62■□□□□ 0.41
DDX55-209ENST00000542286 PCDH11YQ9BZA8 1340 aa17.62■□□□□ 0.41
DDX55-209ENST00000542286 EPB41L2O43491 1005 aaKnown RBP17.62■□□□□ 0.41
DDX55-209ENST00000542286 ARID3AQ99856 593 aa17.62■□□□□ 0.41
DDX55-209ENST00000542286 JAK2O60674 1132 aa17.61■□□□□ 0.41
DDX55-209ENST00000542286 MBD3O95983 291 aa17.61■□□□□ 0.41
DDX55-209ENST00000542286 IL2RBP14784 551 aa17.61■□□□□ 0.41
DDX55-209ENST00000542286 ATP5JP18859 108 aa17.61■□□□□ 0.41
DDX55-209ENST00000542286 FAM89AQ96GI7 184 aa17.61■□□□□ 0.41
DDX55-209ENST00000542286 CWC25Q9NXE8 425 aaPredicted RBP17.61■□□□□ 0.41
DDX55-209ENST00000542286 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.61■□□□□ 0.41
DDX55-209ENST00000542286 H7C1W4 665 aa17.61■□□□□ 0.41
DDX55-209ENST00000542286 KCNB2Q92953 911 aa17.61■□□□□ 0.41
DDX55-209ENST00000542286 MRC1P22897 1456 aa17.6■□□□□ 0.41
DDX55-209ENST00000542286 CHST3Q7LGC8 479 aa17.6■□□□□ 0.41
DDX55-209ENST00000542286 DDX11Q96FC9 970 aa17.6■□□□□ 0.41
DDX55-209ENST00000542286 CPDO75976 1380 aa17.6■□□□□ 0.41
DDX55-209ENST00000542286 GPTP24298 496 aa17.6■□□□□ 0.41
DDX55-209ENST00000542286 DNAJC10Q8IXB1 793 aa17.6■□□□□ 0.41
DDX55-209ENST00000542286 A0A0G2JS52 829 aa17.59■□□□□ 0.41
DDX55-209ENST00000542286 CYP21A2P08686 494 aa17.59■□□□□ 0.41
DDX55-209ENST00000542286 RPS6KB1P23443 525 aa17.59■□□□□ 0.41
DDX55-209ENST00000542286 LARP1BQ659C4 914 aaKnown RBP17.59■□□□□ 0.41
DDX55-209ENST00000542286 COL5A2P05997 1499 aaPredicted RBP17.59■□□□□ 0.41
DDX55-209ENST00000542286 PI16Q6UXB8 463 aa17.59■□□□□ 0.41
DDX55-209ENST00000542286 STOX1Q6ZVD7 989 aa17.59■□□□□ 0.41
DDX55-209ENST00000542286 TM6SF1Q9BZW5 370 aa17.59■□□□□ 0.41
DDX55-209ENST00000542286 TFIP11Q9UBB9 837 aaKnown RBP17.59■□□□□ 0.41
DDX55-209ENST00000542286 XIRP1Q702N8 1843 aaKnown RBP17.59■□□□□ 0.41
DDX55-209ENST00000542286 ADORA1P30542 326 aa17.58■□□□□ 0.41
DDX55-209ENST00000542286 GIMAP6Q6P9H5 292 aa17.58■□□□□ 0.41
DDX55-209ENST00000542286 DCCP43146 1447 aa17.58■□□□□ 0.41
DDX55-209ENST00000542286 PKD1L3Q7Z443 1732 aa17.58■□□□□ 0.4
DDX55-209ENST00000542286 HIP1O00291 1037 aa17.58■□□□□ 0.4
DDX55-209ENST00000542286 PDLIM2Q96JY6 352 aa17.58■□□□□ 0.4
DDX55-209ENST00000542286 SYTL4Q96C24 671 aaPredicted RBP17.57■□□□□ 0.4
DDX55-209ENST00000542286 HAUS7Q99871 368 aa17.57■□□□□ 0.4
DDX55-209ENST00000542286 SMAP1Q8IYB5 467 aaPredicted RBP17.57■□□□□ 0.4
DDX55-209ENST00000542286 TSPY26PQ9H489 355 aa17.57■□□□□ 0.4
DDX55-209ENST00000542286 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.57■□□□□ 0.4
DDX55-209ENST00000542286 FKBP4Q02790 459 aaKnown RBP eCLIP17.57■□□□□ 0.4
DDX55-209ENST00000542286 TTLL5Q6EMB2 1281 aa17.57■□□□□ 0.4
DDX55-209ENST00000542286 MTERF4Q7Z6M4 381 aaKnown RBP17.57■□□□□ 0.4
DDX55-209ENST00000542286 A0A1B0GUL7 405 aa17.56■□□□□ 0.4
DDX55-209ENST00000542286 DYNC1I1O14576 645 aa17.56■□□□□ 0.4
DDX55-209ENST00000542286 HCLS1P14317 486 aaPredicted RBP17.56■□□□□ 0.4
DDX55-209ENST00000542286 Q6ZUG5 572 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms