RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 MRC1P22897 1456 aa8.32□□□□□ -1.08
SNHG1-212ENST00000539975 SOS1Q07889 1333 aaPredicted RBP8.32□□□□□ -1.08
SNHG1-212ENST00000539975 SHANK3Q9BYB0 1731 aa8.32□□□□□ -1.08
SNHG1-212ENST00000539975 KCNQ3O43525 872 aa8.32□□□□□ -1.08
SNHG1-212ENST00000539975 GIGYF1O75420 1035 aaPredicted RBP8.32□□□□□ -1.08
SNHG1-212ENST00000539975 RPS6KA4O75676 772 aa8.32□□□□□ -1.08
SNHG1-212ENST00000539975 HOXB7P09629 217 aa8.32□□□□□ -1.08
SNHG1-212ENST00000539975 CYP19A1P11511 503 aaPredicted RBP8.32□□□□□ -1.08
SNHG1-212ENST00000539975 ITPK1Q13572 414 aa8.32□□□□□ -1.08
SNHG1-212ENST00000539975 SULF1Q8IWU6 871 aa8.32□□□□□ -1.08
SNHG1-212ENST00000539975 LINC00116Q8NCU8 138 aa8.32□□□□□ -1.08
SNHG1-212ENST00000539975 SLC16A10Q8TF71 515 aa8.32□□□□□ -1.08
SNHG1-212ENST00000539975 STK31Q9BXU1 1019 aa8.32□□□□□ -1.08
SNHG1-212ENST00000539975 CNTNAP4Q9C0A0 1308 aa8.31□□□□□ -1.08
SNHG1-212ENST00000539975 ELL2O00472 640 aaPredicted RBP8.31□□□□□ -1.08
SNHG1-212ENST00000539975 POLD1P28340 1107 aa8.31□□□□□ -1.08
SNHG1-212ENST00000539975 IFFO2Q5TF58 517 aa8.31□□□□□ -1.08
SNHG1-212ENST00000539975 HDGFL1Q5TGJ6 251 aa8.31□□□□□ -1.08
SNHG1-212ENST00000539975 CCDC30Q5VVM6 783 aa8.31□□□□□ -1.08
SNHG1-212ENST00000539975 DUSP27Q5VZP5 1158 aa8.31□□□□□ -1.08
SNHG1-212ENST00000539975 PHOX2BQ99453 314 aa8.31□□□□□ -1.08
SNHG1-212ENST00000539975 BTAF1O14981 1849 aa8.31□□□□□ -1.08
SNHG1-212ENST00000539975 KAT6BQ8WYB5 2073 aa8.3□□□□□ -1.08
SNHG1-212ENST00000539975 TNS1Q9HBL0 1735 aaKnown RBP8.3□□□□□ -1.08
SNHG1-212ENST00000539975 ZNF853P0CG23 659 aa8.3□□□□□ -1.08
SNHG1-212ENST00000539975 IL6STP40189 918 aaPredicted RBP8.3□□□□□ -1.08
SNHG1-212ENST00000539975 ZNF827Q17R98 1081 aa8.3□□□□□ -1.08
SNHG1-212ENST00000539975 TWISTNBQ3B726 338 aaPredicted RBP8.3□□□□□ -1.08
SNHG1-212ENST00000539975 KIF6Q6ZMV9 814 aa8.3□□□□□ -1.08
SNHG1-212ENST00000539975 TSR2Q969E8 191 aaKnown RBP8.3□□□□□ -1.08
SNHG1-212ENST00000539975 SLC4A9Q96Q91 983 aa8.3□□□□□ -1.08
SNHG1-212ENST00000539975 SPON1Q9HCB6 807 aa8.3□□□□□ -1.08
SNHG1-212ENST00000539975 PLA2G2EQ9NZK7 142 aa8.3□□□□□ -1.08
SNHG1-212ENST00000539975 DBF4Q9UBU7 674 aaPredicted RBP8.3□□□□□ -1.08
SNHG1-212ENST00000539975 PPP1R1BQ9UD71 204 aaPredicted RBP8.3□□□□□ -1.08
SNHG1-212ENST00000539975 ZNF652Q9Y2D9 606 aa8.3□□□□□ -1.08
SNHG1-212ENST00000539975 USP16Q9Y5T5 823 aa8.3□□□□□ -1.08
SNHG1-212ENST00000539975 ERBB4Q15303 1308 aa8.29□□□□□ -1.08
SNHG1-212ENST00000539975 TOGARAM1Q9Y4F4 1720 aa8.29□□□□□ -1.08
SNHG1-212ENST00000539975 SBF2Q86WG5 1849 aa8.29□□□□□ -1.08
SNHG1-212ENST00000539975 NPHP1O15259 732 aa8.29□□□□□ -1.08
SNHG1-212ENST00000539975 ITGBL1O95965 494 aaPredicted RBP8.29□□□□□ -1.08
SNHG1-212ENST00000539975 A1BGP04217 495 aa8.29□□□□□ -1.08
SNHG1-212ENST00000539975 MYL6BP14649 208 aa8.29□□□□□ -1.08
SNHG1-212ENST00000539975 KMT5BQ4FZB7 885 aa8.29□□□□□ -1.08
SNHG1-212ENST00000539975 INTS5Q6P9B9 1019 aaKnown RBP8.29□□□□□ -1.08
SNHG1-212ENST00000539975 NLGN1Q8N2Q7 840 aa8.29□□□□□ -1.08
SNHG1-212ENST00000539975 MTFR1LQ9H019 292 aa8.29□□□□□ -1.08
SNHG1-212ENST00000539975 HYPKQ9NX55 129 aa8.29□□□□□ -1.08
SNHG1-212ENST00000539975 SCN11AQ9UI33 1791 aa8.29□□□□□ -1.08
SNHG1-212ENST00000539975 FANCIQ9NVI1 1328 aa8.29□□□□□ -1.08
SNHG1-212ENST00000539975 RGPD3A6NKT7 1758 aaPredicted RBP8.28□□□□□ -1.08
SNHG1-212ENST00000539975 RGPD4Q7Z3J3 1758 aa8.28□□□□□ -1.08
SNHG1-212ENST00000539975 DDX58O95786 925 aaKnown RBP8.28□□□□□ -1.08
SNHG1-212ENST00000539975 CLCN1P35523 988 aa8.28□□□□□ -1.08
SNHG1-212ENST00000539975 EXOSC9Q06265 439 aaKnown RBP8.28□□□□□ -1.08
SNHG1-212ENST00000539975 DZIP3Q86Y13 1208 aaKnown RBP8.28□□□□□ -1.08
SNHG1-212ENST00000539975 COL23A1Q86Y22 540 aaPredicted RBP8.28□□□□□ -1.08
SNHG1-212ENST00000539975 YTHDC1Q96MU7 727 aaKnown RBP8.28□□□□□ -1.08
SNHG1-212ENST00000539975 ZBTB1Q9Y2K1 713 aa8.28□□□□□ -1.08
SNHG1-212ENST00000539975 PNPLA7Q6ZV29 1317 aa8.28□□□□□ -1.08
SNHG1-212ENST00000539975 ADAMTS7Q9UKP4 1686 aa8.27□□□□□ -1.08
SNHG1-212ENST00000539975 ITGB4P16144 1822 aa8.27□□□□□ -1.09
SNHG1-212ENST00000539975 PRAMEF22A3QJZ6 481 aa8.27□□□□□ -1.09
SNHG1-212ENST00000539975 ZBTB7AO95365 584 aa8.27□□□□□ -1.09
SNHG1-212ENST00000539975 APLP1P51693 650 aa8.27□□□□□ -1.09
SNHG1-212ENST00000539975 SLFN5Q08AF3 891 aa8.27□□□□□ -1.09
SNHG1-212ENST00000539975 C8orf58Q8NAV2 365 aa8.27□□□□□ -1.09
SNHG1-212ENST00000539975 ZNF428Q96B54 188 aa8.27□□□□□ -1.09
SNHG1-212ENST00000539975 DDX21Q9NR30 783 aaKnown RBP eCLIP8.27□□□□□ -1.091e-323■■■□□ 15.6
SNHG1-212ENST00000539975 KCPQ6ZWJ8 1503 aa8.27□□□□□ -1.09
SNHG1-212ENST00000539975 ZBED9Q6R2W3 1325 aa8.27□□□□□ -1.09
SNHG1-212ENST00000539975 COL15A1P39059 1388 aa8.26□□□□□ -1.09
SNHG1-212ENST00000539975 SLC10A3P09131 477 aa8.26□□□□□ -1.09
SNHG1-212ENST00000539975 CT47B1P0C2W7 299 aaPredicted RBP8.26□□□□□ -1.09
SNHG1-212ENST00000539975 GTF2E1P29083 439 aaPredicted RBP8.26□□□□□ -1.09
SNHG1-212ENST00000539975 EIF5P55010 431 aaKnown RBP8.26□□□□□ -1.09
SNHG1-212ENST00000539975 AIMP1Q12904 312 aaKnown RBP8.26□□□□□ -1.09
SNHG1-212ENST00000539975 AMHR2Q16671 573 aa8.26□□□□□ -1.09
SNHG1-212ENST00000539975 KRT24Q2M2I5 525 aa8.26□□□□□ -1.09
SNHG1-212ENST00000539975 GPCPD1Q9NPB8 672 aa8.26□□□□□ -1.09
SNHG1-212ENST00000539975 CHPF2Q9P2E5 772 aa8.26□□□□□ -1.09
SNHG1-212ENST00000539975 NARFQ9UHQ1 456 aa8.26□□□□□ -1.09
SNHG1-212ENST00000539975 TBC1D2BQ9UPU7 963 aa8.26□□□□□ -1.09
SNHG1-212ENST00000539975 PARP3Q9Y6F1 533 aa8.26□□□□□ -1.09
SNHG1-212ENST00000539975 ZNF521Q96K83 1311 aa8.26□□□□□ -1.09
SNHG1-212ENST00000539975 DDX11L8A8MPP1 907 aa8.25□□□□□ -1.09
SNHG1-212ENST00000539975 ACTN4O43707 911 aaKnown RBP8.25□□□□□ -1.09
SNHG1-212ENST00000539975 CFHP08603 1231 aa8.25□□□□□ -1.09
SNHG1-212ENST00000539975 PIP4K2AP48426 406 aaPredicted RBP8.25□□□□□ -1.09
SNHG1-212ENST00000539975 KCNC4Q03721 635 aa8.25□□□□□ -1.09
SNHG1-212ENST00000539975 HSP90AB3PQ58FF7 597 aa8.25□□□□□ -1.09
SNHG1-212ENST00000539975 USPL1Q5W0Q7 1092 aa8.25□□□□□ -1.09
SNHG1-212ENST00000539975 MSL1Q68DK7 614 aa8.25□□□□□ -1.09
SNHG1-212ENST00000539975 CLEC4GQ6UXB4 293 aa8.25□□□□□ -1.09
SNHG1-212ENST00000539975 COPS6Q7L5N1 327 aa8.25□□□□□ -1.09
SNHG1-212ENST00000539975 RIC3Q7Z5B4 369 aa8.25□□□□□ -1.09
SNHG1-212ENST00000539975 SETDB2Q96T68 719 aa8.25□□□□□ -1.09
SNHG1-212ENST00000539975 USP42Q9H9J4 1324 aaKnown RBP8.25□□□□□ -1.09
SNHG1-212ENST00000539975 EP400Q96L91 3159 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms