RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 DDX46Q7L014 1031 aaKnown RBP15.13■□□□□ 0.01
DDX55-206ENST00000539934 KCTD17Q8N5Z5 321 aa15.13■□□□□ 0.01
DDX55-206ENST00000539934 RAPGEF4Q8WZA2 1011 aa15.13■□□□□ 0.01
DDX55-206ENST00000539934 PDE4AP27815 886 aa15.12■□□□□ 0.01
DDX55-206ENST00000539934 CBX1P83916 185 aa15.12■□□□□ 0.01
DDX55-206ENST00000539934 PANK2Q9BZ23 570 aa15.12■□□□□ 0.01
DDX55-206ENST00000539934 CCDC189A1A4V9 331 aa15.12■□□□□ 0.01
DDX55-206ENST00000539934 UVSSAQ2YD98 709 aa15.12■□□□□ 0.01
DDX55-206ENST00000539934 C8orf58Q8NAV2 365 aa15.12■□□□□ 0.01
DDX55-206ENST00000539934 PPP1R12AO14974 1030 aaPredicted RBP15.11■□□□□ 0.01
DDX55-206ENST00000539934 ZSCAN30Q86W11 494 aa15.11■□□□□ 0.01
DDX55-206ENST00000539934 NMRK2Q9NPI5 230 aa15.11■□□□□ 0.01
DDX55-206ENST00000539934 CHL1O00533 1208 aa15.11■□□□□ 0.01
DDX55-206ENST00000539934 GNAT3A8MTJ3 354 aa15.1■□□□□ 0.01
DDX55-206ENST00000539934 CYP27B1O15528 508 aa15.1■□□□□ 0.01
DDX55-206ENST00000539934 GUCY2CP25092 1073 aa15.1■□□□□ 0.01
DDX55-206ENST00000539934 COL13A1Q5TAT6 717 aaPredicted RBP15.1■□□□□ 0.01
DDX55-206ENST00000539934 ICE2Q659A1 982 aa15.1■□□□□ 0.01
DDX55-206ENST00000539934 ITPRIPQ8IWB1 547 aa15.1■□□□□ 0.01
DDX55-206ENST00000539934 DNAJC5GQ8N7S2 189 aa15.1■□□□□ 0.01
DDX55-206ENST00000539934 CTAGE5O15320 804 aa15.09■□□□□ 0.01
DDX55-206ENST00000539934 HTATSF1O43719 755 aaKnown RBP15.09■□□□□ 0.01
DDX55-206ENST00000539934 MRPL50Q8N5N7 158 aaKnown RBP15.09■□□□□ 0.01
DDX55-206ENST00000539934 DDX19BQ9UMR2 479 aa15.09■□□□□ 0.01
DDX55-206ENST00000539934 BCS1LQ9Y276 419 aa15.09■□□□□ 0.01
DDX55-206ENST00000539934 TAF1LQ8IZX4 1826 aa15.09■□□□□ 0.01
DDX55-206ENST00000539934 A0A0G2JLW4 131 aa15.09■□□□□ 0.01
DDX55-206ENST00000539934 TATP17735 454 aaPredicted RBP15.09■□□□□ 0.01
DDX55-206ENST00000539934 C11orf91Q3C1V1 193 aa15.09■□□□□ 0.01
DDX55-206ENST00000539934 SWT1Q5T5J6 900 aaKnown RBP15.09■□□□□ 0.01
DDX55-206ENST00000539934 NME8Q8N427 588 aa15.09■□□□□ 0.01
DDX55-206ENST00000539934 LINC00116Q8NCU8 138 aa15.09■□□□□ 0.01
DDX55-206ENST00000539934 PIGBQ92521 554 aa15.09■□□□□ 0.01
DDX55-206ENST00000539934 R3HCC1Q9Y3T6 440 aaKnown RBP15.09■□□□□ 0.01
DDX55-206ENST00000539934 GOLGA6CA6NDK9 693 aa15.08■□□□□ 0
DDX55-206ENST00000539934 GOLGA6BA6NDN3 693 aa15.08■□□□□ 0
DDX55-206ENST00000539934 IGHDP01880 384 aa15.08■□□□□ 0
DDX55-206ENST00000539934 GOLGA6DP0CG33 693 aa15.08■□□□□ 0
DDX55-206ENST00000539934 TNNT3P45378 269 aaPredicted RBP15.08■□□□□ 0
DDX55-206ENST00000539934 C1QTNF12Q5T7M4 302 aa15.08■□□□□ 0
DDX55-206ENST00000539934 SKAP1Q86WV1 359 aa15.08■□□□□ 0
DDX55-206ENST00000539934 JMYQ8N9B5 988 aa15.08■□□□□ 0
DDX55-206ENST00000539934 GOLGA6AQ9NYA3 693 aa15.08■□□□□ 0
DDX55-206ENST00000539934 C4BP0C0L5 1744 aa15.08■□□□□ 0
DDX55-206ENST00000539934 TOGARAM1Q9Y4F4 1720 aa15.08■□□□□ 0
DDX55-206ENST00000539934 TMEM57Q8N5G2 664 aa15.08■□□□□ 0
DDX55-206ENST00000539934 FLAD1Q8NFF5 587 aa15.08■□□□□ 0
DDX55-206ENST00000539934 TSPYL4Q9UJ04 414 aa15.08■□□□□ 0
DDX55-206ENST00000539934 GNPATO15228 680 aa15.07■□□□□ 0
DDX55-206ENST00000539934 APLP1P51693 650 aa15.07■□□□□ 0
DDX55-206ENST00000539934 SASS6Q6UVJ0 657 aa15.07■□□□□ 0
DDX55-206ENST00000539934 MMP10P09238 476 aa15.07■□□□□ 0
DDX55-206ENST00000539934 FOXD4L5Q5VV16 416 aaPredicted RBP15.07■□□□□ 0
DDX55-206ENST00000539934 ARHGAP27Q6ZUM4 889 aa15.07■□□□□ 0
DDX55-206ENST00000539934 FOXD4L4Q8WXT5 416 aaPredicted RBP15.07■□□□□ 0
DDX55-206ENST00000539934 MIS18AQ9NYP9 233 aa15.07■□□□□ 0
DDX55-206ENST00000539934 RPS6KL1Q9Y6S9 549 aa15.07■□□□□ 0
DDX55-206ENST00000539934 CSPP1Q1MSJ5 1256 aa15.06■□□□□ 0
DDX55-206ENST00000539934 KRT24Q2M2I5 525 aa15.06■□□□□ 0
DDX55-206ENST00000539934 ARHGAP45Q92619 1136 aa15.06■□□□□ 0
DDX55-206ENST00000539934 ANAPC4Q9UJX5 808 aa15.06■□□□□ 0
DDX55-206ENST00000539934 PCDHB15Q9Y5E8 787 aa15.06■□□□□ 0
DDX55-206ENST00000539934 PCDH11XQ9BZA7 1347 aa15.06■□□□□ 0
DDX55-206ENST00000539934 PCDH11YQ9BZA8 1340 aa15.06■□□□□ 0
DDX55-206ENST00000539934 TOMM70O94826 608 aa15.05■□□□□ 0
DDX55-206ENST00000539934 LIG1P18858 919 aa15.05■□□□□ 0
DDX55-206ENST00000539934 LRCH2Q5VUJ6 765 aa15.05■□□□□ 0
DDX55-206ENST00000539934 ASAP1Q9ULH1 1129 aa15.05■□□□□ 0
DDX55-206ENST00000539934 ITPK1Q13572 414 aa15.05■□□□□ -0
DDX55-206ENST00000539934 ZRSR2Q15696 482 aaKnown RBP15.05■□□□□ -0
DDX55-206ENST00000539934 SMC3Q9UQE7 1217 aa15.05■□□□□ -0
DDX55-206ENST00000539934 UBR3Q6ZT12 1888 aa15.04■□□□□ -0
DDX55-206ENST00000539934 N4BP2Q86UW6 1770 aaPredicted RBP15.04■□□□□ -0
DDX55-206ENST00000539934 LOC102724428A0A0B4J2F2 783 aa15.04■□□□□ -0
DDX55-206ENST00000539934 DHX16O60231 1041 aaKnown RBP15.04■□□□□ -0
DDX55-206ENST00000539934 SIK1P57059 783 aa15.04■□□□□ -0
DDX55-206ENST00000539934 ITGB4P16144 1822 aa15.04■□□□□ -0
DDX55-206ENST00000539934 RWDD1Q9H446 243 aaPredicted RBP15.04■□□□□ -0
DDX55-206ENST00000539934 IPO7O95373 1038 aaKnown RBP15.03■□□□□ -0
DDX55-206ENST00000539934 ATP6V1AP38606 617 aa15.03■□□□□ -0
DDX55-206ENST00000539934 ATP2B3Q16720 1220 aa15.03■□□□□ -0
DDX55-206ENST00000539934 CCDC97Q96F63 343 aaPredicted RBP15.03■□□□□ -0
DDX55-206ENST00000539934 PLEKHO1Q53GL0 409 aaPredicted RBP15.02■□□□□ -0
DDX55-206ENST00000539934 IL17REQ8NFR9 667 aa15.02■□□□□ -0
DDX55-206ENST00000539934 API5Q9BZZ5 524 aaKnown RBP15.02■□□□□ -0
DDX55-206ENST00000539934 MSNP26038 577 aaKnown RBP15.02□□□□□ -0.01
DDX55-206ENST00000539934 CREBRFQ8IUR6 639 aa15.02□□□□□ -0.01
DDX55-206ENST00000539934 PXDNLA1KZ92 1463 aa15.01□□□□□ -0.01
DDX55-206ENST00000539934 PAXBP1Q9Y5B6 917 aa15.01□□□□□ -0.01
DDX55-206ENST00000539934 VIRMAQ69YN4 1812 aaKnown RBP15.01□□□□□ -0.01
DDX55-206ENST00000539934 NCAPD2Q15021 1401 aa15.01□□□□□ -0.01
DDX55-206ENST00000539934 NEFHP12036 1026 aa15.01□□□□□ -0.01
DDX55-206ENST00000539934 DPEP1P16444 411 aa15.01□□□□□ -0.01
DDX55-206ENST00000539934 SSFA2P28290 1259 aa15.01□□□□□ -0.01
DDX55-206ENST00000539934 TAF7Q15545 349 aaPredicted RBP15.01□□□□□ -0.01
DDX55-206ENST00000539934 AMOTQ4VCS5 1084 aa15.01□□□□□ -0.01
DDX55-206ENST00000539934 HS1BP3Q53T59 392 aa15.01□□□□□ -0.01
DDX55-206ENST00000539934 ZNF530Q6P9A1 599 aaPredicted RBP15.01□□□□□ -0.01
DDX55-206ENST00000539934 SMARCC1Q92922 1105 aaPredicted RBP15.01□□□□□ -0.01
DDX55-206ENST00000539934 KDM4CQ9H3R0 1056 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms