RNA–Protein interactions for RNA: ENST00000538689.4

FDFT1-222, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2 BASIC

Gene FDFT1, Length 2,289 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-222ENST00000538689 MYD88Q99836 296 aa8.66□□□□□ -1.02
FDFT1-222ENST00000538689 ANP32EQ9BTT0 268 aa8.66□□□□□ -1.02
FDFT1-222ENST00000538689 TEX13AQ9BXU3 409 aaPredicted RBP8.66□□□□□ -1.02
FDFT1-222ENST00000538689 ASAP1Q9ULH1 1129 aa8.66□□□□□ -1.02
FDFT1-222ENST00000538689 DOT1LQ8TEK3 1739 aa8.66□□□□□ -1.02
FDFT1-222ENST00000538689 BCL9O00512 1426 aa8.65□□□□□ -1.02
FDFT1-222ENST00000538689 KCNQ2O43526 872 aa8.65□□□□□ -1.02
FDFT1-222ENST00000538689 RHPN1Q8TCX5 695 aa8.65□□□□□ -1.02
FDFT1-222ENST00000538689 STAP2Q9UGK3 403 aa8.65□□□□□ -1.02
FDFT1-222ENST00000538689 A1BGP04217 495 aa8.65□□□□□ -1.03
FDFT1-222ENST00000538689 SDSP20132 328 aa8.65□□□□□ -1.03
FDFT1-222ENST00000538689 MX1P20591 662 aa8.65□□□□□ -1.03
FDFT1-222ENST00000538689 CDK11BP21127 795 aaKnown RBP8.65□□□□□ -1.03
FDFT1-222ENST00000538689 KIF1BPQ96EK5 621 aa8.65□□□□□ -1.03
FDFT1-222ENST00000538689 ACSBG1Q96GR2 724 aa8.65□□□□□ -1.03
FDFT1-222ENST00000538689 ATG3Q9NT62 314 aa8.65□□□□□ -1.03
FDFT1-222ENST00000538689 ARFGEF2Q9Y6D5 1785 aa8.65□□□□□ -1.03
FDFT1-222ENST00000538689 COL15A1P39059 1388 aa8.64□□□□□ -1.03
FDFT1-222ENST00000538689 SUCLG2Q96I99 432 aa8.64□□□□□ -1.03
FDFT1-222ENST00000538689 BICC1Q9H694 974 aaKnown RBP8.64□□□□□ -1.03
FDFT1-222ENST00000538689 AOX1Q06278 1338 aa8.64□□□□□ -1.03
FDFT1-222ENST00000538689 TNS1Q9HBL0 1735 aaKnown RBP8.63□□□□□ -1.03
FDFT1-222ENST00000538689 TRIM37O94972 964 aa8.63□□□□□ -1.03
FDFT1-222ENST00000538689 BECN1Q14457 450 aa8.63□□□□□ -1.03
FDFT1-222ENST00000538689 GIGYF2Q6Y7W6 1299 aaKnown RBP8.63□□□□□ -1.03
FDFT1-222ENST00000538689 TTLL7Q6ZT98 887 aa8.63□□□□□ -1.03
FDFT1-222ENST00000538689 ERC1Q8IUD2 1116 aa8.63□□□□□ -1.03
FDFT1-222ENST00000538689 IL1RAPL2Q9NP60 686 aa8.63□□□□□ -1.03
FDFT1-222ENST00000538689 AFDNP55196 1824 aaKnown RBP8.63□□□□□ -1.03
FDFT1-222ENST00000538689 TUBGCP6Q96RT7 1819 aa8.63□□□□□ -1.03
FDFT1-222ENST00000538689 STARD3NLO95772 234 aa8.63□□□□□ -1.03
FDFT1-222ENST00000538689 SLC4A3P48751 1232 aa8.63□□□□□ -1.03
FDFT1-222ENST00000538689 CASC1Q6TDU7 716 aa8.63□□□□□ -1.03
FDFT1-222ENST00000538689 MS4A4AQ96JQ5 239 aa8.63□□□□□ -1.03
FDFT1-222ENST00000538689 NUP188Q5SRE5 1749 aa8.62□□□□□ -1.03
FDFT1-222ENST00000538689 ATP5J2-PTCD1G3V325 749 aa8.62□□□□□ -1.03
FDFT1-222ENST00000538689 HSP90B1P14625 803 aaKnown RBP8.62□□□□□ -1.03
FDFT1-222ENST00000538689 FECHP22830 423 aa8.62□□□□□ -1.03
FDFT1-222ENST00000538689 CASP7P55210 303 aa8.62□□□□□ -1.03
FDFT1-222ENST00000538689 RABL6Q3YEC7 729 aaPredicted RBP8.62□□□□□ -1.03
FDFT1-222ENST00000538689 DNAJC10Q8IXB1 793 aa8.62□□□□□ -1.03
FDFT1-222ENST00000538689 RBM42Q9BTD8 480 aaKnown RBP8.62□□□□□ -1.03
FDFT1-222ENST00000538689 BTAF1O14981 1849 aa8.62□□□□□ -1.03
FDFT1-222ENST00000538689 NHSQ6T4R5 1651 aa8.62□□□□□ -1.03
FDFT1-222ENST00000538689 A0A087WZG4 1122 aa8.61□□□□□ -1.03
FDFT1-222ENST00000538689 PRIM1P49642 420 aaKnown RBP8.61□□□□□ -1.03
FDFT1-222ENST00000538689 OS9Q13438 667 aaPredicted RBP8.61□□□□□ -1.03
FDFT1-222ENST00000538689 TSHZ3Q63HK5 1081 aa8.61□□□□□ -1.03
FDFT1-222ENST00000538689 UPF1Q92900 1129 aaKnown RBP eCLIP8.61□□□□□ -1.03
FDFT1-222ENST00000538689 H7C1W4 665 aa8.61□□□□□ -1.03
FDFT1-222ENST00000538689 EPHA10Q5JZY3 1008 aa8.61□□□□□ -1.03
FDFT1-222ENST00000538689 UBE3BQ7Z3V4 1068 aa8.61□□□□□ -1.03
FDFT1-222ENST00000538689 CLASRPQ8N2M8 674 aaKnown RBP8.61□□□□□ -1.03
FDFT1-222ENST00000538689 CCDC191Q8NCU4 936 aa8.61□□□□□ -1.03
FDFT1-222ENST00000538689 SYTL4Q96C24 671 aaPredicted RBP8.61□□□□□ -1.03
FDFT1-222ENST00000538689 SLC4A9Q96Q91 983 aa8.61□□□□□ -1.03
FDFT1-222ENST00000538689 EMILIN3Q9NT22 766 aa8.61□□□□□ -1.03
FDFT1-222ENST00000538689 CWC25Q9NXE8 425 aaPredicted RBP8.61□□□□□ -1.03
FDFT1-222ENST00000538689 PA2G4Q9UQ80 394 aaKnown RBP8.61□□□□□ -1.03
FDFT1-222ENST00000538689 USP42Q9H9J4 1324 aaKnown RBP8.61□□□□□ -1.03
FDFT1-222ENST00000538689 G3BP1Q13283 466 aaKnown RBP eCLIP8.6□□□□□ -1.038e-11■■■□□ 16.2
FDFT1-222ENST00000538689 PPP1R15BQ5SWA1 713 aa8.6□□□□□ -1.03
FDFT1-222ENST00000538689 FAM196AQ6ZSG2 479 aa8.6□□□□□ -1.03
FDFT1-222ENST00000538689 NUTM1Q86Y26 1132 aa8.6□□□□□ -1.03
FDFT1-222ENST00000538689 ZNF579Q8NAF0 562 aaKnown RBP8.6□□□□□ -1.03
FDFT1-222ENST00000538689 PI4K2BQ8TCG2 481 aa8.6□□□□□ -1.03
FDFT1-222ENST00000538689 ZBTB3Q9H5J0 574 aa8.6□□□□□ -1.03
FDFT1-222ENST00000538689 COPRSQ9NQ92 184 aa8.6□□□□□ -1.03
FDFT1-222ENST00000538689 TTC41PQ6P2S7 1318 aa8.6□□□□□ -1.03
FDFT1-222ENST00000538689 HMGB1P09429 215 aaKnown RBP8.6□□□□□ -1.03
FDFT1-222ENST00000538689 CYP19A1P11511 503 aaPredicted RBP8.6□□□□□ -1.03
FDFT1-222ENST00000538689 TRIM28Q13263 835 aaKnown RBP8.6□□□□□ -1.03
FDFT1-222ENST00000538689 DEFB132Q7Z7B7 95 aa8.6□□□□□ -1.03
FDFT1-222ENST00000538689 KIF2CQ99661 725 aa8.6□□□□□ -1.03
FDFT1-222ENST00000538689 USP26Q9BXU7 913 aa8.6□□□□□ -1.03
FDFT1-222ENST00000538689 TBC1D2Q9BYX2 928 aa8.6□□□□□ -1.03
FDFT1-222ENST00000538689 SASH1O94885 1247 aa8.59□□□□□ -1.03
FDFT1-222ENST00000538689 REC8O95072 547 aa8.59□□□□□ -1.03
FDFT1-222ENST00000538689 TCIRG1Q13488 830 aa8.59□□□□□ -1.03
FDFT1-222ENST00000538689 ISCA1Q9BUE6 129 aa8.59□□□□□ -1.03
FDFT1-222ENST00000538689 TRIM6-TRIM34B2RNG4 842 aa8.59□□□□□ -1.03
FDFT1-222ENST00000538689 ERC2O15083 957 aa8.59□□□□□ -1.03
FDFT1-222ENST00000538689 GNPATO15228 680 aa8.59□□□□□ -1.03
FDFT1-222ENST00000538689 RFX5P48382 616 aaPredicted RBP8.59□□□□□ -1.03
FDFT1-222ENST00000538689 KCNQ4P56696 695 aa8.59□□□□□ -1.03
FDFT1-222ENST00000538689 FOXO4P98177 505 aa8.59□□□□□ -1.03
FDFT1-222ENST00000538689 PTPN12Q05209 780 aaKnown RBP8.59□□□□□ -1.03
FDFT1-222ENST00000538689 SH3D19Q5HYK7 790 aa8.59□□□□□ -1.03
FDFT1-222ENST00000538689 KIF6Q6ZMV9 814 aa8.59□□□□□ -1.03
FDFT1-222ENST00000538689 JARID2Q92833 1246 aaPredicted RBP8.59□□□□□ -1.03
FDFT1-222ENST00000538689 REPIN1Q9BWE0 567 aaKnown RBP8.59□□□□□ -1.03
FDFT1-222ENST00000538689 GLRX3O76003 335 aaKnown RBP8.58□□□□□ -1.04
FDFT1-222ENST00000538689 IFIT2P09913 472 aaKnown RBP8.58□□□□□ -1.04
FDFT1-222ENST00000538689 CHMLP26374 656 aa8.58□□□□□ -1.04
FDFT1-222ENST00000538689 KLHDC4Q8TBB5 520 aa8.58□□□□□ -1.04
FDFT1-222ENST00000538689 SNX21Q969T3 373 aa8.58□□□□□ -1.04
FDFT1-222ENST00000538689 ZNF330Q9Y3S2 320 aaPredicted RBP8.58□□□□□ -1.04
FDFT1-222ENST00000538689 MAP3K15Q6ZN16 1313 aa8.58□□□□□ -1.04
FDFT1-222ENST00000538689 IL6STP40189 918 aaPredicted RBP8.57□□□□□ -1.04
FDFT1-222ENST00000538689 TJP1Q07157 1748 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms