RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 GTPBP4Q9BZE4 634 aaKnown RBP14.39□□□□□ -0.11
CPSF7-218ENST00000537641 UTYO14607 1347 aa14.39□□□□□ -0.11
CPSF7-218ENST00000537641 RFX7Q2KHR2 1363 aa14.39□□□□□ -0.11
CPSF7-218ENST00000537641 PKD1L3Q7Z443 1732 aa14.38□□□□□ -0.11
CPSF7-218ENST00000537641 TNS3Q68CZ2 1445 aa14.38□□□□□ -0.11
CPSF7-218ENST00000537641 RPS6KB1P23443 525 aa14.38□□□□□ -0.11
CPSF7-218ENST00000537641 CDC25BP30305 580 aa14.38□□□□□ -0.11
CPSF7-218ENST00000537641 ZC3H6P61129 1189 aaKnown RBP14.38□□□□□ -0.11
CPSF7-218ENST00000537641 TSGA10IPQ3SY00 556 aa14.38□□□□□ -0.11
CPSF7-218ENST00000537641 PPP4R3BQ5MIZ7 849 aa14.38□□□□□ -0.11
CPSF7-218ENST00000537641 AACSQ86V21 672 aa14.38□□□□□ -0.11
CPSF7-218ENST00000537641 NECAB1Q8N987 351 aa14.38□□□□□ -0.11
CPSF7-218ENST00000537641 XIRP1Q702N8 1843 aaKnown RBP14.38□□□□□ -0.11
CPSF7-218ENST00000537641 C5P01031 1676 aa14.38□□□□□ -0.11
CPSF7-218ENST00000537641 GOLGA6L4A6NEF3 574 aa14.38□□□□□ -0.11
CPSF7-218ENST00000537641 SMTNL1A8MU46 457 aa14.38□□□□□ -0.11
CPSF7-218ENST00000537641 PTGS1P23219 599 aa14.38□□□□□ -0.11
CPSF7-218ENST00000537641 ZNF75DP51815 510 aa14.38□□□□□ -0.11
CPSF7-218ENST00000537641 KSR2Q6VAB6 950 aa14.38□□□□□ -0.11
CPSF7-218ENST00000537641 CADPS2Q86UW7 1296 aa14.38□□□□□ -0.11
CPSF7-218ENST00000537641 RAPGEF4Q8WZA2 1011 aa14.38□□□□□ -0.11
CPSF7-218ENST00000537641 TSC1Q92574 1164 aa14.38□□□□□ -0.11
CPSF7-218ENST00000537641 JARID2Q92833 1246 aaPredicted RBP14.38□□□□□ -0.11
CPSF7-218ENST00000537641 SPATA32Q96LK8 384 aa14.38□□□□□ -0.11
CPSF7-218ENST00000537641 ARID3AQ99856 593 aa14.38□□□□□ -0.11
CPSF7-218ENST00000537641 CBX8Q9HC52 389 aa14.38□□□□□ -0.11
CPSF7-218ENST00000537641 C9orf78Q9NZ63 289 aaPredicted RBP14.38□□□□□ -0.11
CPSF7-218ENST00000537641 ZSCAN20P17040 1043 aaPredicted RBP14.37□□□□□ -0.11
CPSF7-218ENST00000537641 ANO6Q4KMQ2 910 aa14.37□□□□□ -0.11
CPSF7-218ENST00000537641 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.37□□□□□ -0.113e-9■■□□□ 13.7
CPSF7-218ENST00000537641 KRT32Q14532 448 aa14.36□□□□□ -0.11
CPSF7-218ENST00000537641 LEO1Q8WVC0 666 aaPredicted RBP14.36□□□□□ -0.11
CPSF7-218ENST00000537641 DACT1Q9NYF0 836 aa14.36□□□□□ -0.11
CPSF7-218ENST00000537641 TATP17735 454 aaPredicted RBP14.35□□□□□ -0.11
CPSF7-218ENST00000537641 G3BP1Q13283 466 aaKnown RBP eCLIP14.35□□□□□ -0.11
CPSF7-218ENST00000537641 CCDC186Q7Z3E2 898 aa14.35□□□□□ -0.11
CPSF7-218ENST00000537641 LUZP1Q86V48 1076 aa14.35□□□□□ -0.11
CPSF7-218ENST00000537641 FAM227BQ96M60 508 aa14.35□□□□□ -0.11
CPSF7-218ENST00000537641 NLRP2Q9NX02 1062 aa14.35□□□□□ -0.11
CPSF7-218ENST00000537641 MAP3K2Q9Y2U5 619 aa14.35□□□□□ -0.11
CPSF7-218ENST00000537641 KDM6AO15550 1401 aaPredicted RBP14.35□□□□□ -0.11
CPSF7-218ENST00000537641 MEGF6O75095 1541 aa14.35□□□□□ -0.11
CPSF7-218ENST00000537641 ANXA1P04083 346 aa14.35□□□□□ -0.11
CPSF7-218ENST00000537641 TOB2Q14106 344 aaPredicted RBP14.35□□□□□ -0.11
CPSF7-218ENST00000537641 FERMT3Q86UX7 667 aa14.35□□□□□ -0.11
CPSF7-218ENST00000537641 LINS1Q8NG48 757 aa14.35□□□□□ -0.11
CPSF7-218ENST00000537641 FEZ1Q99689 392 aa14.35□□□□□ -0.11
CPSF7-218ENST00000537641 FSD1Q9BTV5 496 aa14.35□□□□□ -0.11
CPSF7-218ENST00000537641 PA2G4Q9UQ80 394 aaKnown RBP14.35□□□□□ -0.11
CPSF7-218ENST00000537641 PARP4Q9UKK3 1724 aaKnown RBP14.35□□□□□ -0.11
CPSF7-218ENST00000537641 A0A0D9SFI3 127 aa14.34□□□□□ -0.11
CPSF7-218ENST00000537641 SASH1O94885 1247 aa14.34□□□□□ -0.11
CPSF7-218ENST00000537641 RESTQ13127 1097 aa14.34□□□□□ -0.11
CPSF7-218ENST00000537641 LARP1Q6PKG0 1096 aaKnown RBP14.34□□□□□ -0.11
CPSF7-218ENST00000537641 ZSCAN16Q9H4T2 348 aaPredicted RBP14.34□□□□□ -0.11
CPSF7-218ENST00000537641 PRDM10Q9NQV6 1147 aa14.34□□□□□ -0.11
CPSF7-218ENST00000537641 PAXBP1Q9Y5B6 917 aa14.34□□□□□ -0.11
CPSF7-218ENST00000537641 GRM8O00222 908 aa14.33□□□□□ -0.12
CPSF7-218ENST00000537641 NEMFO60524 1076 aa14.33□□□□□ -0.12
CPSF7-218ENST00000537641 DDX58O95786 925 aaKnown RBP14.33□□□□□ -0.12
CPSF7-218ENST00000537641 PHKG2P15735 406 aa14.33□□□□□ -0.12
CPSF7-218ENST00000537641 CAMK4Q16566 473 aa14.33□□□□□ -0.12
CPSF7-218ENST00000537641 ATP2B3Q16720 1220 aa14.33□□□□□ -0.12
CPSF7-218ENST00000537641 USPL1Q5W0Q7 1092 aa14.33□□□□□ -0.12
CPSF7-218ENST00000537641 ZSCAN25Q6NSZ9 544 aa14.33□□□□□ -0.12
CPSF7-218ENST00000537641 SARM1Q6SZW1 724 aa14.33□□□□□ -0.12
CPSF7-218ENST00000537641 DRC7Q8IY82 874 aa14.33□□□□□ -0.12
CPSF7-218ENST00000537641 EAF2Q96CJ1 260 aaPredicted RBP14.33□□□□□ -0.12
CPSF7-218ENST00000537641 SUCLG2Q96I99 432 aa14.33□□□□□ -0.12
CPSF7-218ENST00000537641 TRIM5Q9C035 493 aa14.33□□□□□ -0.12
CPSF7-218ENST00000537641 SLC52A2Q9HAB3 445 aa14.33□□□□□ -0.12
CPSF7-218ENST00000537641 DDX21Q9NR30 783 aaKnown RBP eCLIP14.33□□□□□ -0.12
CPSF7-218ENST00000537641 CPDO75976 1380 aa14.33□□□□□ -0.12
CPSF7-218ENST00000537641 CTAGE5O15320 804 aa14.32□□□□□ -0.12
CPSF7-218ENST00000537641 CBX1P83916 185 aa14.32□□□□□ -0.12
CPSF7-218ENST00000537641 PROSER3Q2NL68 480 aa14.32□□□□□ -0.12
CPSF7-218ENST00000537641 SPATA31A3Q5VYP0 1347 aa14.32□□□□□ -0.12
CPSF7-218ENST00000537641 CKAP2LQ8IYA6 745 aa14.32□□□□□ -0.12
CPSF7-218ENST00000537641 BICD2Q8TD16 824 aa14.32□□□□□ -0.12
CPSF7-218ENST00000537641 DDX17Q92841 729 aaKnown RBP14.32□□□□□ -0.12
CPSF7-218ENST00000537641 GTF3C6Q969F1 213 aa14.32□□□□□ -0.12
CPSF7-218ENST00000537641 KIF20AO95235 890 aa14.32□□□□□ -0.12
CPSF7-218ENST00000537641 ZNF165P49910 485 aa14.32□□□□□ -0.12
CPSF7-218ENST00000537641 NCBP1Q09161 790 aaKnown RBP14.32□□□□□ -0.12
CPSF7-218ENST00000537641 FAM173BQ6P4H8 233 aa14.32□□□□□ -0.12
CPSF7-218ENST00000537641 ZNF790Q6PG37 636 aa14.32□□□□□ -0.12
CPSF7-218ENST00000537641 IFNL2Q8IZJ0 200 aa14.32□□□□□ -0.12
CPSF7-218ENST00000537641 DDX54Q8TDD1 881 aaKnown RBP14.32□□□□□ -0.12
CPSF7-218ENST00000537641 CFAP45Q9UL16 551 aa14.32□□□□□ -0.12
CPSF7-218ENST00000537641 LAMB4A4D0S4 1761 aa14.31□□□□□ -0.12
CPSF7-218ENST00000537641 PRAMEF22A3QJZ6 481 aa14.31□□□□□ -0.12
CPSF7-218ENST00000537641 FAM177BA6PVY3 158 aa14.31□□□□□ -0.12
CPSF7-218ENST00000537641 TNNT1P13805 278 aa14.31□□□□□ -0.12
CPSF7-218ENST00000537641 PGBD1Q96JS3 809 aa14.31□□□□□ -0.12
CPSF7-218ENST00000537641 CGNQ9P2M7 1197 aaKnown RBP14.31□□□□□ -0.12
CPSF7-218ENST00000537641 CLIP2Q9UDT6 1046 aa14.31□□□□□ -0.12
CPSF7-218ENST00000537641 CHMP3Q9Y3E7 222 aa14.31□□□□□ -0.12
CPSF7-218ENST00000537641 LAMA4Q16363 1823 aa14.3□□□□□ -0.12
CPSF7-218ENST00000537641 CSB-PGBD3P0DP91 1061 aa14.3□□□□□ -0.12
CPSF7-218ENST00000537641 MRFAP1L1Q96HT8 127 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms