RNA–Protein interactions for RNA: ENST00000532449.5

CHEK1-213, Transcript of checkpoint kinase 1, humanhuman

TSL 2 BASIC

Gene CHEK1, Length 4,051 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-213ENST00000532449 KIAA1524Q8TCG1 905 aa12.58□□□□□ -0.4
CHEK1-213ENST00000532449 STRN4Q9NRL3 753 aa12.58□□□□□ -0.4
CHEK1-213ENST00000532449 AMOTL2Q9Y2J4 779 aa12.58□□□□□ -0.4
CHEK1-213ENST00000532449 COBLO75128 1261 aa12.58□□□□□ -0.4
CHEK1-213ENST00000532449 DDIT3P35638 169 aa12.58□□□□□ -0.4
CHEK1-213ENST00000532449 IQSEC3Q9UPP2 1182 aaPredicted RBP12.58□□□□□ -0.4
CHEK1-213ENST00000532449 PTPDC1A2A3K4 754 aa12.57□□□□□ -0.4
CHEK1-213ENST00000532449 PROSER3Q2NL68 480 aa12.57□□□□□ -0.4
CHEK1-213ENST00000532449 C11orf57Q6ZUT1 292 aaPredicted RBP12.57□□□□□ -0.4
CHEK1-213ENST00000532449 MRVI1Q9Y6F6 885 aa12.57□□□□□ -0.4
CHEK1-213ENST00000532449 TAF6LQ9Y6J9 622 aa12.57□□□□□ -0.4
CHEK1-213ENST00000532449 PLEKHO1Q53GL0 409 aaPredicted RBP12.57□□□□□ -0.4
CHEK1-213ENST00000532449 CAGE1Q8TC20 777 aa12.57□□□□□ -0.4
CHEK1-213ENST00000532449 NPHP3Q7Z494 1330 aa12.57□□□□□ -0.4
CHEK1-213ENST00000532449 GPTP24298 496 aa12.57□□□□□ -0.4
CHEK1-213ENST00000532449 TTC39AQ5SRH9 613 aa12.57□□□□□ -0.4
CHEK1-213ENST00000532449 ZNF710Q8N1W2 664 aa12.57□□□□□ -0.4
CHEK1-213ENST00000532449 XAGE3Q8WTP9 111 aa12.57□□□□□ -0.4
CHEK1-213ENST00000532449 DBNDD2Q9BQY9 259 aa12.57□□□□□ -0.4
CHEK1-213ENST00000532449 CARD6Q9BX69 1037 aa12.57□□□□□ -0.4
CHEK1-213ENST00000532449 MYO5CQ9NQX4 1742 aa12.57□□□□□ -0.4
CHEK1-213ENST00000532449 SEC31AO94979 1220 aaKnown RBP12.57□□□□□ -0.4
CHEK1-213ENST00000532449 SLU7O95391 586 aaKnown RBP12.57□□□□□ -0.4
CHEK1-213ENST00000532449 ENOX2Q16206 610 aaKnown RBP12.57□□□□□ -0.4
CHEK1-213ENST00000532449 EAF2Q96CJ1 260 aaPredicted RBP12.57□□□□□ -0.4
CHEK1-213ENST00000532449 MYL10Q9BUA6 226 aa12.57□□□□□ -0.4
CHEK1-213ENST00000532449 MAST1Q9Y2H9 1570 aa12.56□□□□□ -0.4
CHEK1-213ENST00000532449 KLF18A0A0U1RQI7 1052 aa12.56□□□□□ -0.4
CHEK1-213ENST00000532449 SMTNL1A8MU46 457 aa12.56□□□□□ -0.4
CHEK1-213ENST00000532449 IFIT1P09914 478 aaKnown RBP12.56□□□□□ -0.4
CHEK1-213ENST00000532449 TFCP2Q12800 502 aa12.56□□□□□ -0.4
CHEK1-213ENST00000532449 CHRNA2Q15822 529 aa12.56□□□□□ -0.4
CHEK1-213ENST00000532449 KIF4BQ2VIQ3 1234 aa12.56□□□□□ -0.4
CHEK1-213ENST00000532449 IL17REQ8NFR9 667 aa12.56□□□□□ -0.4
CHEK1-213ENST00000532449 CCDC12Q8WUD4 166 aaPredicted RBP12.56□□□□□ -0.4
CHEK1-213ENST00000532449 CENPHQ9H3R5 247 aa12.56□□□□□ -0.4
CHEK1-213ENST00000532449 GPHNQ9NQX3 736 aaPredicted RBP12.56□□□□□ -0.4
CHEK1-213ENST00000532449 HYPKQ9NX55 129 aa12.56□□□□□ -0.4
CHEK1-213ENST00000532449 CCDC144BQ3MJ40 725 aa12.56□□□□□ -0.4
CHEK1-213ENST00000532449 ZNF589Q86UQ0 364 aaPredicted RBP12.56□□□□□ -0.4
CHEK1-213ENST00000532449 ZNF594Q96JF6 807 aaPredicted RBP12.56□□□□□ -0.4
CHEK1-213ENST00000532449 KCNF1Q9H3M0 494 aa12.56□□□□□ -0.4
CHEK1-213ENST00000532449 RAI14Q9P0K7 980 aa12.56□□□□□ -0.4
CHEK1-213ENST00000532449 ADGBQ8N7X0 1667 aa12.56□□□□□ -0.4
CHEK1-213ENST00000532449 AP5Z1O43299 807 aa12.56□□□□□ -0.4
CHEK1-213ENST00000532449 RHOXF2BP0C7M4 288 aa12.56□□□□□ -0.4
CHEK1-213ENST00000532449 AFMP43652 599 aa12.56□□□□□ -0.4
CHEK1-213ENST00000532449 UBASH3AP57075 661 aa12.56□□□□□ -0.4
CHEK1-213ENST00000532449 DMTNQ08495 405 aa12.56□□□□□ -0.4
CHEK1-213ENST00000532449 RHOXF2Q9BQY4 288 aa12.56□□□□□ -0.4
CHEK1-213ENST00000532449 CLSTN1O94985 981 aa12.55□□□□□ -0.4
CHEK1-213ENST00000532449 USP28Q96RU2 1077 aa12.55□□□□□ -0.4
CHEK1-213ENST00000532449 YTHDC2Q9H6S0 1430 aaKnown RBP12.55□□□□□ -0.4
CHEK1-213ENST00000532449 HIP1O00291 1037 aa12.55□□□□□ -0.4
CHEK1-213ENST00000532449 CYP2E1P05181 493 aaPredicted RBP12.55□□□□□ -0.4
CHEK1-213ENST00000532449 ZNF827Q17R98 1081 aa12.55□□□□□ -0.4
CHEK1-213ENST00000532449 LMBR1LQ6UX01 489 aa12.55□□□□□ -0.4
CHEK1-213ENST00000532449 TRMT44Q8IYL2 757 aaKnown RBP12.55□□□□□ -0.4
CHEK1-213ENST00000532449 STAMQ92783 540 aa12.55□□□□□ -0.4
CHEK1-213ENST00000532449 EEF2KMTQ96G04 330 aa12.55□□□□□ -0.4
CHEK1-213ENST00000532449 DESI2Q9BSY9 194 aa12.55□□□□□ -0.4
CHEK1-213ENST00000532449 DBF4Q9UBU7 674 aaPredicted RBP12.55□□□□□ -0.4
CHEK1-213ENST00000532449 ERCC3P19447 782 aa12.55□□□□□ -0.4
CHEK1-213ENST00000532449 MATR3P43243 847 aaKnown RBP eCLIP12.55□□□□□ -0.48e-7■■■■□ 25.4
CHEK1-213ENST00000532449 DNAJC21Q5F1R6 531 aaKnown RBP12.55□□□□□ -0.4
CHEK1-213ENST00000532449 SAFBQ15424 915 aaKnown RBP eCLIP12.54□□□□□ -0.4
CHEK1-213ENST00000532449 VPS53Q5VIR6 699 aa12.54□□□□□ -0.4
CHEK1-213ENST00000532449 TIGD1Q96MW7 591 aa12.54□□□□□ -0.4
CHEK1-213ENST00000532449 OGFRQ9NZT2 677 aa12.54□□□□□ -0.4
CHEK1-213ENST00000532449 KDM5AP29375 1690 aaKnown RBP12.54□□□□□ -0.4
CHEK1-213ENST00000532449 CNNM3Q8NE01 707 aa12.54□□□□□ -0.4
CHEK1-213ENST00000532449 SUCLG2Q96I99 432 aa12.54□□□□□ -0.4
CHEK1-213ENST00000532449 LSG1Q9H089 658 aaKnown RBP12.54□□□□□ -0.4
CHEK1-213ENST00000532449 hCG_1642624A0A1W2PR95 340 aa12.54□□□□□ -0.4
CHEK1-213ENST00000532449 TPM1P09493 284 aa12.54□□□□□ -0.4
CHEK1-213ENST00000532449 NCBP1Q09161 790 aaKnown RBP12.54□□□□□ -0.4
CHEK1-213ENST00000532449 IPO4Q8TEX9 1081 aaKnown RBP12.54□□□□□ -0.4
CHEK1-213ENST00000532449 XPO4Q9C0E2 1151 aaKnown RBP12.54□□□□□ -0.4
CHEK1-213ENST00000532449 PLEKHA4Q9H4M7 779 aa12.54□□□□□ -0.4
CHEK1-213ENST00000532449 ZCCHC17Q9NP64 241 aaKnown RBP12.54□□□□□ -0.4
CHEK1-213ENST00000532449 PIK3R4Q99570 1358 aa12.54□□□□□ -0.4
CHEK1-213ENST00000532449 GRM8O00222 908 aa12.53□□□□□ -0.4
CHEK1-213ENST00000532449 TSR1Q2NL82 804 aaKnown RBP12.53□□□□□ -0.4
CHEK1-213ENST00000532449 LEKR1Q6ZMV7 388 aa12.53□□□□□ -0.4
CHEK1-213ENST00000532449 ZKSCAN3Q9BRR0 538 aa12.53□□□□□ -0.4
CHEK1-213ENST00000532449 GTPBP4Q9BZE4 634 aaKnown RBP12.53□□□□□ -0.4
CHEK1-213ENST00000532449 ABCC1P33527 1531 aa12.53□□□□□ -0.4
CHEK1-213ENST00000532449 SF3A3Q12874 501 aaKnown RBP eCLIP12.53□□□□□ -0.4
CHEK1-213ENST00000532449 CUL4AQ13619 759 aa12.53□□□□□ -0.4
CHEK1-213ENST00000532449 COL9A3Q14050 684 aaPredicted RBP12.53□□□□□ -0.4
CHEK1-213ENST00000532449 DRC1Q96MC2 740 aa12.53□□□□□ -0.4
CHEK1-213ENST00000532449 CNNM1Q9NRU3 951 aa12.53□□□□□ -0.4
CHEK1-213ENST00000532449 PAXBP1Q9Y5B6 917 aa12.53□□□□□ -0.4
CHEK1-213ENST00000532449 NPATQ14207 1427 aa12.53□□□□□ -0.4
CHEK1-213ENST00000532449 PPFIBP1Q86W92 1011 aa12.53□□□□□ -0.4
CHEK1-213ENST00000532449 HELBQ8NG08 1087 aaPredicted RBP12.53□□□□□ -0.4
CHEK1-213ENST00000532449 CABLES1Q8TDN4 633 aa12.53□□□□□ -0.4
CHEK1-213ENST00000532449 MINDY4BA8MYZ0 360 aa12.52□□□□□ -0.4
CHEK1-213ENST00000532449 CMTR1Q8N1G2 835 aaKnown RBP12.52□□□□□ -0.4
CHEK1-213ENST00000532449 GPATCH11Q8N954 259 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms