RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 FCHSD1Q86WN1 690 aa11.57□□□□□ -0.56
CHKA-205ENST00000530730 RRAGCQ9HB90 399 aa11.57□□□□□ -0.56
CHKA-205ENST00000530730 ITGB2P05107 769 aa11.56□□□□□ -0.56
CHKA-205ENST00000530730 RASA1P20936 1047 aa11.56□□□□□ -0.56
CHKA-205ENST00000530730 CLIP1P30622 1438 aa11.56□□□□□ -0.56
CHKA-205ENST00000530730 SH3PXD2AQ5TCZ1 1133 aa11.56□□□□□ -0.56
CHKA-205ENST00000530730 C9orf84Q5VXU9 1444 aa11.56□□□□□ -0.56
CHKA-205ENST00000530730 RHPN1Q8TCX5 695 aa11.56□□□□□ -0.56
CHKA-205ENST00000530730 ZNF594Q96JF6 807 aaPredicted RBP11.56□□□□□ -0.56
CHKA-205ENST00000530730 PPP1R12CQ9BZL4 782 aa11.56□□□□□ -0.56
CHKA-205ENST00000530730 STRN4Q9NRL3 753 aa11.56□□□□□ -0.56
CHKA-205ENST00000530730 KIF14Q15058 1648 aa11.56□□□□□ -0.56
CHKA-205ENST00000530730 GNB5O14775 395 aa11.55□□□□□ -0.56
CHKA-205ENST00000530730 SEC13P55735 322 aa11.55□□□□□ -0.56
CHKA-205ENST00000530730 LRRC69Q6ZNQ3 347 aa11.55□□□□□ -0.56
CHKA-205ENST00000530730 TSEN2Q8NCE0 465 aaKnown RBP11.55□□□□□ -0.56
CHKA-205ENST00000530730 CALR3Q96L12 384 aaKnown RBP11.55□□□□□ -0.56
CHKA-205ENST00000530730 NEUROD4Q9HD90 331 aa11.55□□□□□ -0.56
CHKA-205ENST00000530730 ARHGAP5Q13017 1502 aa11.55□□□□□ -0.56
CHKA-205ENST00000530730 C21orf2O43822 256 aa11.54□□□□□ -0.56
CHKA-205ENST00000530730 MDFIQ99750 246 aa11.54□□□□□ -0.56
CHKA-205ENST00000530730 ANKIB1Q9P2G1 1089 aa11.54□□□□□ -0.56
CHKA-205ENST00000530730 PRR12Q9ULL5 1215 aa11.54□□□□□ -0.56
CHKA-205ENST00000530730 ZNF518AQ6AHZ1 1483 aa11.54□□□□□ -0.56
CHKA-205ENST00000530730 CASKIN1Q8WXD9 1431 aa11.53□□□□□ -0.56
CHKA-205ENST00000530730 SFI1A8K8P3 1242 aa11.53□□□□□ -0.56
CHKA-205ENST00000530730 SUZ12Q15022 739 aaKnown RBP11.53□□□□□ -0.56
CHKA-205ENST00000530730 KANK4Q5T7N3 995 aaPredicted RBP11.53□□□□□ -0.56
CHKA-205ENST00000530730 CHSY3Q70JA7 882 aa11.53□□□□□ -0.56
CHKA-205ENST00000530730 PHACTR1Q9C0D0 580 aa11.53□□□□□ -0.56
CHKA-205ENST00000530730 ARHGEF12Q9NZN5 1544 aa11.53□□□□□ -0.56
CHKA-205ENST00000530730 MYO5CQ9NQX4 1742 aa11.52□□□□□ -0.56
CHKA-205ENST00000530730 MSTNO14793 375 aa11.52□□□□□ -0.57
CHKA-205ENST00000530730 COL8A1P27658 744 aa11.52□□□□□ -0.57
CHKA-205ENST00000530730 KCNQ4P56696 695 aa11.52□□□□□ -0.57
CHKA-205ENST00000530730 TRAPPC8Q9Y2L5 1435 aa11.52□□□□□ -0.57
CHKA-205ENST00000530730 FAM196BA6NMK8 535 aa11.51□□□□□ -0.57
CHKA-205ENST00000530730 PPP1R12BO60237 982 aaPredicted RBP11.51□□□□□ -0.57
CHKA-205ENST00000530730 SIN3BO75182 1162 aa11.51□□□□□ -0.57
CHKA-205ENST00000530730 PTK7Q13308 1070 aa11.51□□□□□ -0.57
CHKA-205ENST00000530730 LARP1Q6PKG0 1096 aaKnown RBP11.51□□□□□ -0.57
CHKA-205ENST00000530730 SPOCK3Q9BQ16 436 aa11.51□□□□□ -0.57
CHKA-205ENST00000530730 C2orf49Q9BVC5 232 aaPredicted RBP11.51□□□□□ -0.57
CHKA-205ENST00000530730 ATAD2Q6PL18 1390 aa11.51□□□□□ -0.57
CHKA-205ENST00000530730 KDM5CP41229 1560 aa11.5□□□□□ -0.57
CHKA-205ENST00000530730 PCBP4P57723 403 aaKnown RBP11.5□□□□□ -0.57
CHKA-205ENST00000530730 HIF1AQ16665 826 aa11.5□□□□□ -0.57
CHKA-205ENST00000530730 NOP53Q9NZM5 478 aaKnown RBP11.5□□□□□ -0.57
CHKA-205ENST00000530730 MLH3Q9UHC1 1453 aa11.5□□□□□ -0.57
CHKA-205ENST00000530730 ELOA3CA0A087WX78 387 aaPredicted RBP11.49□□□□□ -0.57
CHKA-205ENST00000530730 KRBA1A5PL33 1030 aa11.49□□□□□ -0.57
CHKA-205ENST00000530730 ELOA3DA6NLF2 546 aaPredicted RBP11.49□□□□□ -0.57
CHKA-205ENST00000530730 ADARB2-AS1A8MUL3 147 aa11.49□□□□□ -0.57
CHKA-205ENST00000530730 PROCP04070 461 aa11.49□□□□□ -0.57
CHKA-205ENST00000530730 ELOA3BQ3SY89 546 aa11.49□□□□□ -0.57
CHKA-205ENST00000530730 ELOA3Q8NG57 546 aa11.49□□□□□ -0.57
CHKA-205ENST00000530730 ZNF777Q9ULD5 760 aaPredicted RBP11.49□□□□□ -0.57
CHKA-205ENST00000530730 HCN4Q9Y3Q4 1203 aa11.49□□□□□ -0.57
CHKA-205ENST00000530730 CCDC18Q5T9S5 1454 aa11.49□□□□□ -0.57
CHKA-205ENST00000530730 LRRIQ1Q96JM4 1722 aa11.49□□□□□ -0.57
CHKA-205ENST00000530730 FER1L4A9Z1Z3 1794 aa11.49□□□□□ -0.57
CHKA-205ENST00000530730 CRTC2Q53ET0 693 aaPredicted RBP11.48□□□□□ -0.57
CHKA-205ENST00000530730 SYT9Q86SS6 491 aa11.48□□□□□ -0.57
CHKA-205ENST00000530730 TNFRSF25Q93038 417 aa11.48□□□□□ -0.57
CHKA-205ENST00000530730 LOC100996750A0A140TA64 210 aa11.47□□□□□ -0.57
CHKA-205ENST00000530730 HNRNPMP52272 730 aaKnown RBP eCLIP11.47□□□□□ -0.576e-7■■■■□ 23.7
CHKA-205ENST00000530730 TYRO3Q06418 890 aa11.47□□□□□ -0.57
CHKA-205ENST00000530730 SFSWAPQ12872 951 aaKnown RBP11.47□□□□□ -0.57
CHKA-205ENST00000530730 ALDH16A1Q8IZ83 802 aa11.47□□□□□ -0.57
CHKA-205ENST00000530730 SCG3Q8WXD2 468 aaKnown RBP11.47□□□□□ -0.57
CHKA-205ENST00000530730 SUSD3Q96L08 255 aa11.47□□□□□ -0.57
CHKA-205ENST00000530730 KRTAP4-6Q9BYQ5 205 aa11.47□□□□□ -0.57
CHKA-205ENST00000530730 SUV39H2Q9H5I1 410 aa11.47□□□□□ -0.57
CHKA-205ENST00000530730 BRD7Q9NPI1 651 aa11.47□□□□□ -0.57
CHKA-205ENST00000530730 CDC42BPBQ9Y5S2 1711 aa11.46□□□□□ -0.57
CHKA-205ENST00000530730 DIP2CQ9Y2E4 1556 aa11.46□□□□□ -0.57
CHKA-205ENST00000530730 DPYDQ12882 1025 aa11.46□□□□□ -0.57
CHKA-205ENST00000530730 VRTNQ9H8Y1 702 aa11.46□□□□□ -0.57
CHKA-205ENST00000530730 USP17L15C9J2P7 530 aa11.45□□□□□ -0.58
CHKA-205ENST00000530730 USP17L10C9JJH3 530 aa11.45□□□□□ -0.58
CHKA-205ENST00000530730 USP17L13C9JLJ4 530 aa11.45□□□□□ -0.58
CHKA-205ENST00000530730 USP17L12C9JPN9 530 aa11.45□□□□□ -0.58
CHKA-205ENST00000530730 USP17L11C9JVI0 530 aa11.45□□□□□ -0.58
CHKA-205ENST00000530730 USP17L21D6R901 530 aa11.45□□□□□ -0.58
CHKA-205ENST00000530730 USP17L18D6R9N7 530 aa11.45□□□□□ -0.58
CHKA-205ENST00000530730 USP17L22D6RA61 530 aa11.45□□□□□ -0.58
CHKA-205ENST00000530730 USP17L17D6RBQ6 530 aa11.45□□□□□ -0.58
CHKA-205ENST00000530730 USP17L19D6RCP7 530 aa11.45□□□□□ -0.58
CHKA-205ENST00000530730 USP17L20D6RJB6 530 aa11.45□□□□□ -0.58
CHKA-205ENST00000530730 IGFBP4P22692 258 aa11.45□□□□□ -0.58
CHKA-205ENST00000530730 USP17L24Q0WX57 530 aa11.45□□□□□ -0.58
CHKA-205ENST00000530730 NEUROD1Q13562 356 aa11.45□□□□□ -0.58
CHKA-205ENST00000530730 GRIN2CQ14957 1233 aa11.45□□□□□ -0.58
CHKA-205ENST00000530730 IER5Q5VY09 327 aa11.45□□□□□ -0.58
CHKA-205ENST00000530730 ANKMY2Q8IV38 441 aa11.45□□□□□ -0.58
CHKA-205ENST00000530730 HSH2DQ96JZ2 352 aa11.45□□□□□ -0.58
CHKA-205ENST00000530730 CEP63Q96MT8 703 aa11.45□□□□□ -0.58
CHKA-205ENST00000530730 REREQ9P2R6 1566 aa11.45□□□□□ -0.58
CHKA-205ENST00000530730 ABCC1P33527 1531 aa11.45□□□□□ -0.58
CHKA-205ENST00000530730 GPATCH8Q9UKJ3 1502 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms