RNA–Protein interactions for RNA: ENST00000527825.1

CHD7-205, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 434 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-205ENST00000527825 TRAPPC3LQ5T215 181 aa5.72□□□□□ -1.49
CHD7-205ENST00000527825 TRAF7Q6Q0C0 670 aa5.72□□□□□ -1.49
CHD7-205ENST00000527825 AMIGO3Q86WK7 504 aa5.72□□□□□ -1.49
CHD7-205ENST00000527825 SCUBE3Q8IX30 993 aa5.72□□□□□ -1.49
CHD7-205ENST00000527825 NBPF15Q8N660 670 aa5.72□□□□□ -1.49
CHD7-205ENST00000527825 RDH13Q8NBN7 331 aa5.72□□□□□ -1.49
CHD7-205ENST00000527825 SLC24A3Q9HC58 644 aa5.72□□□□□ -1.49
CHD7-205ENST00000527825 RTCBQ9Y3I0 505 aaKnown RBP5.72□□□□□ -1.49
CHD7-205ENST00000527825 AFDNP55196 1824 aaKnown RBP5.71□□□□□ -1.49
CHD7-205ENST00000527825 KTN1Q86UP2 1357 aaKnown RBP5.71□□□□□ -1.5
CHD7-205ENST00000527825 IQCA1LA6NCM1 817 aa5.71□□□□□ -1.5
CHD7-205ENST00000527825 RASSF10A6NK89 507 aa5.71□□□□□ -1.5
CHD7-205ENST00000527825 CLCN1P35523 988 aa5.71□□□□□ -1.5
CHD7-205ENST00000527825 EAPPQ56P03 285 aaPredicted RBP5.71□□□□□ -1.5
CHD7-205ENST00000527825 LDHDQ86WU2 507 aa5.71□□□□□ -1.5
CHD7-205ENST00000527825 SULF1Q8IWU6 871 aa5.71□□□□□ -1.5
CHD7-205ENST00000527825 ANKLE1Q8NAG6 615 aa5.71□□□□□ -1.5
CHD7-205ENST00000527825 GPCPD1Q9NPB8 672 aa5.71□□□□□ -1.5
CHD7-205ENST00000527825 KDM6AO15550 1401 aaPredicted RBP5.71□□□□□ -1.5
CHD7-205ENST00000527825 PASKQ96RG2 1323 aa5.71□□□□□ -1.5
CHD7-205ENST00000527825 LTBP1Q14766 1721 aa5.71□□□□□ -1.5
CHD7-205ENST00000527825 FER1L6Q2WGJ9 1857 aa5.71□□□□□ -1.5
CHD7-205ENST00000527825 AKAP11Q9UKA4 1901 aa5.7□□□□□ -1.5
CHD7-205ENST00000527825 POTECB2RU33 542 aa5.7□□□□□ -1.5
CHD7-205ENST00000527825 TRIM66O15016 1216 aa5.7□□□□□ -1.5
CHD7-205ENST00000527825 CA12O43570 354 aa5.7□□□□□ -1.5
CHD7-205ENST00000527825 CHRNA5P30532 468 aa5.7□□□□□ -1.5
CHD7-205ENST00000527825 ATP6V1AP38606 617 aa5.7□□□□□ -1.5
CHD7-205ENST00000527825 AMHR2Q16671 573 aa5.7□□□□□ -1.5
CHD7-205ENST00000527825 ERFEQ4G0M1 354 aa5.7□□□□□ -1.5
CHD7-205ENST00000527825 TRIM67Q6ZTA4 783 aa5.7□□□□□ -1.5
CHD7-205ENST00000527825 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.7□□□□□ -1.5
CHD7-205ENST00000527825 LINC00116Q8NCU8 138 aa5.7□□□□□ -1.5
CHD7-205ENST00000527825 CCER1Q8TC90 406 aaPredicted RBP5.7□□□□□ -1.5
CHD7-205ENST00000527825 RAPGEF4Q8WZA2 1011 aa5.7□□□□□ -1.5
CHD7-205ENST00000527825 SLC6A16Q9GZN6 736 aa5.7□□□□□ -1.5
CHD7-205ENST00000527825 COL5A3P25940 1745 aaPredicted RBP5.7□□□□□ -1.5
CHD7-205ENST00000527825 PCDH11XQ9BZA7 1347 aa5.7□□□□□ -1.5
CHD7-205ENST00000527825 PCDH11YQ9BZA8 1340 aa5.7□□□□□ -1.5
CHD7-205ENST00000527825 CENPJQ9HC77 1338 aaPredicted RBP5.7□□□□□ -1.5
CHD7-205ENST00000527825 MEGF6O75095 1541 aa5.69□□□□□ -1.5
CHD7-205ENST00000527825 LOC102724428A0A0B4J2F2 783 aa5.69□□□□□ -1.5
CHD7-205ENST00000527825 TATP17735 454 aaPredicted RBP5.69□□□□□ -1.5
CHD7-205ENST00000527825 SIK1P57059 783 aa5.69□□□□□ -1.5
CHD7-205ENST00000527825 FUT2Q10981 343 aa5.69□□□□□ -1.5
CHD7-205ENST00000527825 TTLL12Q14166 644 aaPredicted RBP5.69□□□□□ -1.5
CHD7-205ENST00000527825 HABP4Q5JVS0 413 aaKnown RBP5.69□□□□□ -1.5
CHD7-205ENST00000527825 PLA2G2CQ5R387 149 aa5.69□□□□□ -1.5
CHD7-205ENST00000527825 MORN1Q5T089 497 aa5.69□□□□□ -1.5
CHD7-205ENST00000527825 SPRYD7Q5W111 196 aa5.69□□□□□ -1.5
CHD7-205ENST00000527825 LIAT1Q6ZQX7 453 aa5.69□□□□□ -1.5
CHD7-205ENST00000527825 CAPNS2Q96L46 248 aa5.69□□□□□ -1.5
CHD7-205ENST00000527825 GPR101Q96P66 508 aaPredicted RBP5.69□□□□□ -1.5
CHD7-205ENST00000527825 SPSB2Q99619 263 aa5.69□□□□□ -1.5
CHD7-205ENST00000527825 REPIN1Q9BWE0 567 aaKnown RBP5.69□□□□□ -1.5
CHD7-205ENST00000527825 CGNL1Q0VF96 1302 aa5.69□□□□□ -1.5
CHD7-205ENST00000527825 EVC2Q86UK5 1308 aa5.69□□□□□ -1.5
CHD7-205ENST00000527825 DDNO94850 711 aaPredicted RBP5.68□□□□□ -1.5
CHD7-205ENST00000527825 GYS1P13807 737 aa5.68□□□□□ -1.5
CHD7-205ENST00000527825 GCGRP47871 477 aa5.68□□□□□ -1.5
CHD7-205ENST00000527825 NBPF1Q3BBV0 1214 aa5.68□□□□□ -1.5
CHD7-205ENST00000527825 CYP4F22Q6NT55 531 aa5.68□□□□□ -1.5
CHD7-205ENST00000527825 ZNF598Q86UK7 904 aaKnown RBP5.68□□□□□ -1.5
CHD7-205ENST00000527825 TTLL6Q8N841 843 aa5.68□□□□□ -1.5
CHD7-205ENST00000527825 IP6K1Q92551 441 aa5.68□□□□□ -1.5
CHD7-205ENST00000527825 FAM217BQ9NTX9 383 aaPredicted RBP5.68□□□□□ -1.5
CHD7-205ENST00000527825 ZNF831Q5JPB2 1677 aa5.68□□□□□ -1.5
CHD7-205ENST00000527825 SMG6Q86US8 1419 aaKnown RBP5.67□□□□□ -1.5
CHD7-205ENST00000527825 CD46P15529 392 aa5.67□□□□□ -1.5
CHD7-205ENST00000527825 AMPHP49418 695 aa5.67□□□□□ -1.5
CHD7-205ENST00000527825 ZNF697Q5TEC3 545 aa5.67□□□□□ -1.5
CHD7-205ENST00000527825 THAP11Q96EK4 314 aa5.67□□□□□ -1.5
CHD7-205ENST00000527825 TMOD3Q9NYL9 352 aa5.67□□□□□ -1.5
CHD7-205ENST00000527825 USP31Q70CQ4 1352 aa5.67□□□□□ -1.5
CHD7-205ENST00000527825 MYH14Q7Z406 1995 aaKnown RBP5.66□□□□□ -1.5
CHD7-205ENST00000527825 ADAMTSL1Q8N6G6 1762 aa5.66□□□□□ -1.5
CHD7-205ENST00000527825 PRKCSHP14314 528 aaPredicted RBP5.66□□□□□ -1.5
CHD7-205ENST00000527825 SSTR3P32745 418 aaPredicted RBP5.66□□□□□ -1.5
CHD7-205ENST00000527825 MAP2K2P36507 400 aa5.66□□□□□ -1.5
CHD7-205ENST00000527825 PDE4DQ08499 809 aa5.66□□□□□ -1.5
CHD7-205ENST00000527825 TPRNQ4KMQ1 711 aa5.66□□□□□ -1.5
CHD7-205ENST00000527825 GIGYF2Q6Y7W6 1299 aaKnown RBP5.66□□□□□ -1.5
CHD7-205ENST00000527825 NME9Q86XW9 330 aa5.66□□□□□ -1.5
CHD7-205ENST00000527825 PARP9Q8IXQ6 854 aa5.66□□□□□ -1.5
CHD7-205ENST00000527825 CNTROBQ8N137 903 aa5.66□□□□□ -1.5
CHD7-205ENST00000527825 SLC17A8Q8NDX2 589 aa5.66□□□□□ -1.5
CHD7-205ENST00000527825 PIGBQ92521 554 aa5.66□□□□□ -1.5
CHD7-205ENST00000527825 ANP32EQ9BTT0 268 aa5.66□□□□□ -1.5
CHD7-205ENST00000527825 BCL11AQ9H165 835 aa5.66□□□□□ -1.5
CHD7-205ENST00000527825 TAF1DQ9H5J8 278 aaPredicted RBP5.66□□□□□ -1.5
CHD7-205ENST00000527825 HACL1Q9UJ83 578 aa5.66□□□□□ -1.5
CHD7-205ENST00000527825 SLC27A5Q9Y2P5 690 aa5.66□□□□□ -1.5
CHD7-205ENST00000527825 CD163L1Q9NR16 1453 aa5.65□□□□□ -1.5
CHD7-205ENST00000527825 ARFGEF2Q9Y6D5 1785 aa5.65□□□□□ -1.5
CHD7-205ENST00000527825 NFKBIEO00221 500 aa5.65□□□□□ -1.5
CHD7-205ENST00000527825 AOC2O75106 756 aa5.65□□□□□ -1.5
CHD7-205ENST00000527825 FMNL1O95466 1100 aaPredicted RBP5.65□□□□□ -1.5
CHD7-205ENST00000527825 PRR20EP86478 221 aa5.65□□□□□ -1.5
CHD7-205ENST00000527825 PRR20CP86479 221 aa5.65□□□□□ -1.5
CHD7-205ENST00000527825 PRR20DP86480 221 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms