RNA–Protein interactions for RNA: ENST00000527442.5

PKP3-205, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-205ENST00000527442 NLRP3Q96P20 1036 aa27.15■■□□□ 1.94
PKP3-205ENST00000527442 ADARB2Q9NS39 739 aaKnown RBP27.15■■□□□ 1.94
PKP3-205ENST00000527442 TRIM35Q9UPQ4 493 aa27.15■■□□□ 1.94
PKP3-205ENST00000527442 CXCL9Q07325 125 aa27.14■■□□□ 1.94
PKP3-205ENST00000527442 WWC1Q8IX03 1113 aa27.14■■□□□ 1.94
PKP3-205ENST00000527442 SALL2Q9Y467 1007 aaPredicted RBP27.14■■□□□ 1.94
PKP3-205ENST00000527442 AOC2O75106 756 aa27.13■■□□□ 1.93
PKP3-205ENST00000527442 PDIA6Q15084 440 aa27.13■■□□□ 1.93
PKP3-205ENST00000527442 FAM161AQ3B820 660 aa27.13■■□□□ 1.93
PKP3-205ENST00000527442 BEGAINQ9BUH8 593 aa27.13■■□□□ 1.93
PKP3-205ENST00000527442 ZNRF3Q9ULT6 936 aa27.13■■□□□ 1.93
PKP3-205ENST00000527442 GMPSP49915 693 aaPredicted RBP27.12■■□□□ 1.93
PKP3-205ENST00000527442 SLC10A5Q5PT55 438 aa27.12■■□□□ 1.93
PKP3-205ENST00000527442 UTP14AQ9BVJ6 771 aaKnown RBP27.12■■□□□ 1.93
PKP3-205ENST00000527442 VPS33BQ9H267 617 aa27.12■■□□□ 1.93
PKP3-205ENST00000527442 TSKSQ9UJT2 592 aa27.12■■□□□ 1.93
PKP3-205ENST00000527442 DUOX1Q9NRD9 1551 aa27.11■■□□□ 1.93
PKP3-205ENST00000527442 ANXA1P04083 346 aa27.11■■□□□ 1.93
PKP3-205ENST00000527442 PROSER3Q2NL68 480 aa27.11■■□□□ 1.93
PKP3-205ENST00000527442 RTFDC1Q9BY42 306 aaPredicted RBP27.11■■□□□ 1.93
PKP3-205ENST00000527442 TMX4Q9H1E5 349 aaPredicted RBP27.11■■□□□ 1.93
PKP3-205ENST00000527442 LRRC37AA6NMS7 1700 aa27.1■■□□□ 1.93
PKP3-205ENST00000527442 SUPT20HQ8NEM7 779 aa27.1■■□□□ 1.93
PKP3-205ENST00000527442 GLIS2Q9BZE0 524 aaPredicted RBP27.1■■□□□ 1.93
PKP3-205ENST00000527442 EIF2S2P20042 333 aaKnown RBP27.09■■□□□ 1.93
PKP3-205ENST00000527442 SAPCD2Q86UD0 394 aa27.09■■□□□ 1.93
PKP3-205ENST00000527442 WDR63Q8IWG1 891 aa27.09■■□□□ 1.93
PKP3-205ENST00000527442 TSPYL4Q9UJ04 414 aa27.09■■□□□ 1.93
PKP3-205ENST00000527442 CELF2O95319 508 aaKnown RBP27.08■■□□□ 1.93
PKP3-205ENST00000527442 DPP8Q6V1X1 898 aaPredicted RBP27.08■■□□□ 1.93
PKP3-205ENST00000527442 DDX60Q8IY21 1712 aaKnown RBP27.07■■□□□ 1.92
PKP3-205ENST00000527442 MAP2K2P36507 400 aa27.07■■□□□ 1.92
PKP3-205ENST00000527442 CASP8AP2Q9UKL3 1982 aa27.06■■□□□ 1.92
PKP3-205ENST00000527442 CCDC85CA6NKD9 419 aa27.06■■□□□ 1.92
PKP3-205ENST00000527442 HCLS1P14317 486 aaPredicted RBP27.06■■□□□ 1.92
PKP3-205ENST00000527442 KIAA2012Q0VF49 1180 aa27.06■■□□□ 1.92
PKP3-205ENST00000527442 CIAPIN1Q6FI81 312 aa27.06■■□□□ 1.92
PKP3-205ENST00000527442 SP8Q8IXZ3 490 aa27.06■■□□□ 1.92
PKP3-205ENST00000527442 MPNDQ8N594 471 aa27.06■■□□□ 1.92
PKP3-205ENST00000527442 PGAP2Q9UHJ9 254 aa27.06■■□□□ 1.92
PKP3-205ENST00000527442 IL16Q14005 1332 aa27.06■■□□□ 1.92
PKP3-205ENST00000527442 CDHR2Q9BYE9 1310 aa27.06■■□□□ 1.92
PKP3-205ENST00000527442 RAD17O75943 681 aa27.05■■□□□ 1.92
PKP3-205ENST00000527442 HIRAP54198 1017 aaPredicted RBP27.05■■□□□ 1.92
PKP3-205ENST00000527442 GOLGA2Q08379 1002 aa27.05■■□□□ 1.92
PKP3-205ENST00000527442 NLRP10Q86W26 655 aa27.05■■□□□ 1.92
PKP3-205ENST00000527442 BBOX1O75936 387 aa27.04■■□□□ 1.92
PKP3-205ENST00000527442 CALD1Q05682 793 aaKnown RBP27.04■■□□□ 1.92
PKP3-205ENST00000527442 TRPM4Q8TD43 1214 aa27.04■■□□□ 1.92
PKP3-205ENST00000527442 SHTN1A0MZ66 631 aa27.03■■□□□ 1.92
PKP3-205ENST00000527442 BCL2L13Q9BXK5 485 aa27.03■■□□□ 1.92
PKP3-205ENST00000527442 ZNF408Q9H9D4 720 aa27.03■■□□□ 1.92
PKP3-205ENST00000527442 COPS6Q7L5N1 327 aa27.02■■□□□ 1.92
PKP3-205ENST00000527442 NECTIN2Q92692 538 aa27.02■■□□□ 1.92
PKP3-205ENST00000527442 HHIPL1Q96JK4 782 aa27.02■■□□□ 1.92
PKP3-205ENST00000527442 YDJCA8MPS7 323 aa27.01■■□□□ 1.91
PKP3-205ENST00000527442 AIMP1Q12904 312 aaKnown RBP27.01■■□□□ 1.91
PKP3-205ENST00000527442 GRAPQ13588 217 aa27.01■■□□□ 1.91
PKP3-205ENST00000527442 TNIP1Q15025 636 aa27.01■■□□□ 1.91
PKP3-205ENST00000527442 HSP90AB3PQ58FF7 597 aa27.01■■□□□ 1.91
PKP3-205ENST00000527442 DDX46Q7L014 1031 aaKnown RBP27.01■■□□□ 1.91
PKP3-205ENST00000527442 GRAPLQ8TC17 118 aaPredicted RBP27.01■■□□□ 1.91
PKP3-205ENST00000527442 XAGE3Q8WTP9 111 aa27.01■■□□□ 1.91
PKP3-205ENST00000527442 SLC34A2O95436 690 aa27■■□□□ 1.91
PKP3-205ENST00000527442 ZC3H15Q8WU90 426 aaKnown RBP27■■□□□ 1.91
PKP3-205ENST00000527442 TRMT112Q9UI30 125 aaKnown RBP27■■□□□ 1.91
PKP3-205ENST00000527442 COL4A1P02462 1669 aa27■■□□□ 1.91
PKP3-205ENST00000527442 SH3TC1Q8TE82 1336 aa26.99■■□□□ 1.91
PKP3-205ENST00000527442 E9PSI1 815 aa26.99■■□□□ 1.91
PKP3-205ENST00000527442 CA12O43570 354 aa26.99■■□□□ 1.91
PKP3-205ENST00000527442 BRPF1P55201 1214 aaPredicted RBP26.99■■□□□ 1.91
PKP3-205ENST00000527442 SLFN5Q08AF3 891 aa26.99■■□□□ 1.91
PKP3-205ENST00000527442 CNOT7Q9UIV1 285 aaKnown RBP26.99■■□□□ 1.91
PKP3-205ENST00000527442 RGS19P49795 217 aa26.98■■□□□ 1.91
PKP3-205ENST00000527442 MLLT1Q03111 559 aaPredicted RBP26.98■■□□□ 1.91
PKP3-205ENST00000527442 TCIRG1Q13488 830 aa26.98■■□□□ 1.91
PKP3-205ENST00000527442 CDC37L1Q7L3B6 337 aa26.98■■□□□ 1.91
PKP3-205ENST00000527442 ZNF428Q96B54 188 aa26.98■■□□□ 1.91
PKP3-205ENST00000527442 CDCA7LQ96GN5 454 aa26.98■■□□□ 1.91
PKP3-205ENST00000527442 POLR2AP24928 1970 aaKnown RBP26.98■■□□□ 1.91
PKP3-205ENST00000527442 TRMT2AQ8IZ69 625 aaKnown RBP26.97■■□□□ 1.91
PKP3-205ENST00000527442 MCOLN1Q9GZU1 580 aa26.97■■□□□ 1.91
PKP3-205ENST00000527442 BABAM1Q9NWV8 329 aa26.97■■□□□ 1.91
PKP3-205ENST00000527442 CENPBP07199 599 aaPredicted RBP26.96■■□□□ 1.91
PKP3-205ENST00000527442 DLK2Q6UY11 383 aa26.96■■□□□ 1.91
PKP3-205ENST00000527442 MICALL2Q8IY33 904 aa26.96■■□□□ 1.91
PKP3-205ENST00000527442 ZIC5Q96T25 663 aa26.96■■□□□ 1.91
PKP3-205ENST00000527442 SPINK5Q9NQ38 1064 aaPredicted RBP26.96■■□□□ 1.91
PKP3-205ENST00000527442 IFT57Q9NWB7 429 aa26.96■■□□□ 1.91
PKP3-205ENST00000527442 ZNF853P0CG23 659 aa26.95■■□□□ 1.9
PKP3-205ENST00000527442 ZBTB12Q9Y330 459 aaPredicted RBP26.95■■□□□ 1.9
PKP3-205ENST00000527442 H7C1D1 291 aa26.94■■□□□ 1.9
PKP3-205ENST00000527442 KRT24Q2M2I5 525 aa26.94■■□□□ 1.9
PKP3-205ENST00000527442 USP48Q86UV5 1035 aa26.94■■□□□ 1.9
PKP3-205ENST00000527442 GNAI1P63096 354 aa26.93■■□□□ 1.9
PKP3-205ENST00000527442 DUSP27Q5VZP5 1158 aa26.93■■□□□ 1.9
PKP3-205ENST00000527442 TMC4Q7Z404 712 aa26.93■■□□□ 1.9
PKP3-205ENST00000527442 CFAP44Q96MT7 982 aa26.93■■□□□ 1.9
PKP3-205ENST00000527442 MYH16Q9H6N6 1097 aa26.93■■□□□ 1.9
PKP3-205ENST00000527442 HUNKP57058 714 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms