RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 ZNF408Q9H9D4 720 aa21.66■■□□□ 1.06
CHMP4A-203ENST00000527154 CNOT7Q9UIV1 285 aaKnown RBP21.66■■□□□ 1.06
CHMP4A-203ENST00000527154 SHTN1A0MZ66 631 aa21.65■■□□□ 1.06
CHMP4A-203ENST00000527154 ZBTB3Q9H5J0 574 aa21.65■■□□□ 1.06
CHMP4A-203ENST00000527154 RAD17O75943 681 aa21.64■■□□□ 1.05
CHMP4A-203ENST00000527154 SOX10P56693 466 aa21.64■■□□□ 1.05
CHMP4A-203ENST00000527154 NGEFQ8N5V2 710 aa21.64■■□□□ 1.05
CHMP4A-203ENST00000527154 PNISRQ8TF01 805 aaKnown RBP21.64■■□□□ 1.05
CHMP4A-203ENST00000527154 CCDC102AQ96A19 550 aa21.64■■□□□ 1.05
CHMP4A-203ENST00000527154 RNF186Q9NXI6 227 aa21.64■■□□□ 1.05
CHMP4A-203ENST00000527154 MIS18AQ9NYP9 233 aa21.64■■□□□ 1.05
CHMP4A-203ENST00000527154 NUDCQ9Y266 331 aa21.64■■□□□ 1.05
CHMP4A-203ENST00000527154 DLK2Q6UY11 383 aa21.63■■□□□ 1.05
CHMP4A-203ENST00000527154 DPP8Q6V1X1 898 aaPredicted RBP21.63■■□□□ 1.05
CHMP4A-203ENST00000527154 USP48Q86UV5 1035 aa21.63■■□□□ 1.05
CHMP4A-203ENST00000527154 MPNDQ8N594 471 aa21.63■■□□□ 1.05
CHMP4A-203ENST00000527154 CFAP53Q96M91 514 aa21.63■■□□□ 1.05
CHMP4A-203ENST00000527154 BCL2L13Q9BXK5 485 aa21.63■■□□□ 1.05
CHMP4A-203ENST00000527154 TMX4Q9H1E5 349 aaPredicted RBP21.63■■□□□ 1.05
CHMP4A-203ENST00000527154 ANKRD36CQ5JPF3 1778 aa21.63■■□□□ 1.05
CHMP4A-203ENST00000527154 MICALL2Q8IY33 904 aa21.62■■□□□ 1.05
CHMP4A-203ENST00000527154 GBA2Q9HCG7 927 aaPredicted RBP21.62■■□□□ 1.05
CHMP4A-203ENST00000527154 RRP7AQ9Y3A4 280 aaKnown RBP21.62■■□□□ 1.05
CHMP4A-203ENST00000527154 LRRC37AA6NMS7 1700 aa21.62■■□□□ 1.05
CHMP4A-203ENST00000527154 H7C1D1 291 aa21.61■■□□□ 1.05
CHMP4A-203ENST00000527154 U2AF1L5P0DN76 240 aaPredicted RBP21.61■■□□□ 1.05
CHMP4A-203ENST00000527154 U2AF1Q01081 240 aaKnown RBP eCLIP21.61■■□□□ 1.05
CHMP4A-203ENST00000527154 KIF23Q02241 960 aaPredicted RBP21.61■■□□□ 1.05
CHMP4A-203ENST00000527154 UTP14AQ9BVJ6 771 aaKnown RBP21.61■■□□□ 1.05
CHMP4A-203ENST00000527154 SLC10A3P09131 477 aa21.6■■□□□ 1.05
CHMP4A-203ENST00000527154 MYL6BP14649 208 aa21.6■■□□□ 1.05
CHMP4A-203ENST00000527154 PDIA6Q15084 440 aa21.6■■□□□ 1.05
CHMP4A-203ENST00000527154 CTU1Q7Z7A3 348 aaKnown RBP21.6■■□□□ 1.05
CHMP4A-203ENST00000527154 CSRNP1Q96S65 589 aa21.6■■□□□ 1.05
CHMP4A-203ENST00000527154 LAMB2P55268 1798 aa21.6■■□□□ 1.05
CHMP4A-203ENST00000527154 EGFRP00533 1210 aa21.59■■□□□ 1.05
CHMP4A-203ENST00000527154 KRT26Q7Z3Y9 468 aa21.59■■□□□ 1.05
CHMP4A-203ENST00000527154 TRPA1O75762 1119 aa21.58■■□□□ 1.05
CHMP4A-203ENST00000527154 GRAPQ13588 217 aa21.58■■□□□ 1.05
CHMP4A-203ENST00000527154 SAMD7Q7Z3H4 446 aa21.58■■□□□ 1.05
CHMP4A-203ENST00000527154 TMC4Q7Z404 712 aa21.58■■□□□ 1.05
CHMP4A-203ENST00000527154 GRAPLQ8TC17 118 aaPredicted RBP21.58■■□□□ 1.05
CHMP4A-203ENST00000527154 ZBTB12Q9Y330 459 aaPredicted RBP21.58■■□□□ 1.05
CHMP4A-203ENST00000527154 REM2Q8IYK8 340 aaPredicted RBP21.57■■□□□ 1.04
CHMP4A-203ENST00000527154 C2orf69Q8N8R5 385 aa21.57■■□□□ 1.04
CHMP4A-203ENST00000527154 PSMD14O00487 310 aa21.56■■□□□ 1.04
CHMP4A-203ENST00000527154 RPS12P25398 132 aaKnown RBP21.56■■□□□ 1.04
CHMP4A-203ENST00000527154 PPP2R1AP30153 589 aa21.55■■□□□ 1.04
CHMP4A-203ENST00000527154 ZNF157P51786 506 aaPredicted RBP21.55■■□□□ 1.04
CHMP4A-203ENST00000527154 HPS5Q9UPZ3 1129 aa21.55■■□□□ 1.04
CHMP4A-203ENST00000527154 AKAP11Q9UKA4 1901 aa21.55■■□□□ 1.04
CHMP4A-203ENST00000527154 ZNF609O15014 1411 aa21.55■■□□□ 1.04
CHMP4A-203ENST00000527154 POLR2AP24928 1970 aaKnown RBP21.54■■□□□ 1.04
CHMP4A-203ENST00000527154 RTL9Q8NET4 1388 aa21.54■■□□□ 1.04
CHMP4A-203ENST00000527154 ADM5C9JUS6 153 aa21.54■■□□□ 1.04
CHMP4A-203ENST00000527154 NLRP10Q86W26 655 aa21.54■■□□□ 1.04
CHMP4A-203ENST00000527154 DLG5Q8TDM6 1919 aa21.53■■□□□ 1.04
CHMP4A-203ENST00000527154 PKN2Q16513 984 aaKnown RBP21.53■■□□□ 1.04
CHMP4A-203ENST00000527154 TBC1D10BQ4KMP7 808 aaPredicted RBP21.53■■□□□ 1.04
CHMP4A-203ENST00000527154 DDX46Q7L014 1031 aaKnown RBP21.53■■□□□ 1.04
CHMP4A-203ENST00000527154 PLEKHF1Q96S99 279 aa21.53■■□□□ 1.04
CHMP4A-203ENST00000527154 HCLS1P14317 486 aaPredicted RBP21.52■■□□□ 1.04
CHMP4A-203ENST00000527154 RASAL3Q86YV0 1011 aa21.52■■□□□ 1.04
CHMP4A-203ENST00000527154 DCPSQ96C86 337 aaKnown RBP21.52■■□□□ 1.04
CHMP4A-203ENST00000527154 PCGF6Q9BYE7 350 aa21.52■■□□□ 1.04
CHMP4A-203ENST00000527154 PROSER3Q2NL68 480 aa21.51■■□□□ 1.03
CHMP4A-203ENST00000527154 HSP90AB3PQ58FF7 597 aa21.51■■□□□ 1.03
CHMP4A-203ENST00000527154 NOM1Q5C9Z4 860 aaKnown RBP21.51■■□□□ 1.03
CHMP4A-203ENST00000527154 MKI67P46013 3256 aaKnown RBP21.51■■□□□ 1.03
CHMP4A-203ENST00000527154 WASHC4Q2M389 1173 aa21.5■■□□□ 1.03
CHMP4A-203ENST00000527154 THUMPD2Q9BTF0 503 aaKnown RBP21.5■■□□□ 1.03
CHMP4A-203ENST00000527154 SH3TC1Q8TE82 1336 aa21.5■■□□□ 1.03
CHMP4A-203ENST00000527154 VIL1P09327 827 aaKnown RBP21.49■■□□□ 1.03
CHMP4A-203ENST00000527154 FKBP1BP68106 108 aa21.49■■□□□ 1.03
CHMP4A-203ENST00000527154 POLLQ9UGP5 575 aa21.49■■□□□ 1.03
CHMP4A-203ENST00000527154 TAF1P21675 1872 aa21.48■■□□□ 1.03
CHMP4A-203ENST00000527154 TCIRG1Q13488 830 aa21.48■■□□□ 1.03
CHMP4A-203ENST00000527154 KIF4BQ2VIQ3 1234 aa21.48■■□□□ 1.03
CHMP4A-203ENST00000527154 DBNDD1Q9H9R9 158 aa21.48■■□□□ 1.03
CHMP4A-203ENST00000527154 KCNQ5Q9NR82 932 aa21.48■■□□□ 1.03
CHMP4A-203ENST00000527154 GGA3Q9NZ52 723 aa21.48■■□□□ 1.03
CHMP4A-203ENST00000527154 COL4A1P02462 1669 aa21.47■■□□□ 1.03
CHMP4A-203ENST00000527154 HTTP42858 3142 aa21.47■■□□□ 1.03
CHMP4A-203ENST00000527154 DDX60Q8IY21 1712 aaKnown RBP21.47■■□□□ 1.03
CHMP4A-203ENST00000527154 PAPPA2Q9BXP8 1791 aa21.47■■□□□ 1.03
CHMP4A-203ENST00000527154 ZNF280AP59817 542 aaPredicted RBP21.47■■□□□ 1.03
CHMP4A-203ENST00000527154 CNGB1Q14028 1251 aaPredicted RBP21.47■■□□□ 1.03
CHMP4A-203ENST00000527154 SF3B3Q15393 1217 aaKnown RBP21.47■■□□□ 1.03
CHMP4A-203ENST00000527154 NFE2L2Q16236 605 aa21.47■■□□□ 1.03
CHMP4A-203ENST00000527154 CDCA5Q96FF9 252 aa21.47■■□□□ 1.03
CHMP4A-203ENST00000527154 ECE2O60344 883 aa21.46■■□□□ 1.03
CHMP4A-203ENST00000527154 SULF1Q8IWU6 871 aa21.46■■□□□ 1.03
CHMP4A-203ENST00000527154 TRMT112Q9UI30 125 aaKnown RBP21.46■■□□□ 1.03
CHMP4A-203ENST00000527154 SCN9AQ15858 1988 aa21.46■■□□□ 1.03
CHMP4A-203ENST00000527154 ZNF296Q8WUU4 475 aaPredicted RBP21.45■■□□□ 1.02
CHMP4A-203ENST00000527154 CELF1Q92879 486 aaKnown RBP21.45■■□□□ 1.02
CHMP4A-203ENST00000527154 GCC1Q96CN9 775 aa21.45■■□□□ 1.02
CHMP4A-203ENST00000527154 CFHR5Q9BXR6 569 aa21.45■■□□□ 1.02
CHMP4A-203ENST00000527154 BABAM1Q9NWV8 329 aa21.45■■□□□ 1.02
CHMP4A-203ENST00000527154 ASTN2O75129 1339 aaPredicted RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms