RNA–Protein interactions for RNA: ENST00000526527.1

COPB1-205, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-205ENST00000526527 ZDHHC13Q8IUH4 622 aa6.17□□□□□ -1.42
COPB1-205ENST00000526527 USP17L3A6NCW0 530 aa6.16□□□□□ -1.42
COPB1-205ENST00000526527 USP17L4A6NCW7 530 aa6.16□□□□□ -1.42
COPB1-205ENST00000526527 MAP3K6O95382 1288 aa6.16□□□□□ -1.42
COPB1-205ENST00000526527 HIF1AQ16665 826 aa6.16□□□□□ -1.42
COPB1-205ENST00000526527 USP17L2Q6R6M4 530 aa6.16□□□□□ -1.42
COPB1-205ENST00000526527 Q6ZS46 218 aa6.16□□□□□ -1.42
COPB1-205ENST00000526527 USP17L1Q7RTZ2 530 aa6.16□□□□□ -1.42
COPB1-205ENST00000526527 DTX1Q86Y01 620 aa6.16□□□□□ -1.42
COPB1-205ENST00000526527 PLEKHM2Q8IWE5 1019 aa6.16□□□□□ -1.42
COPB1-205ENST00000526527 TRPM4Q8TD43 1214 aa6.16□□□□□ -1.42
COPB1-205ENST00000526527 UCN2Q96RP3 112 aa6.16□□□□□ -1.42
COPB1-205ENST00000526527 ADGRE2Q9UHX3 823 aa6.16□□□□□ -1.42
COPB1-205ENST00000526527 WNT11O96014 354 aa6.15□□□□□ -1.42
COPB1-205ENST00000526527 GRIK1P39086 918 aa6.15□□□□□ -1.42
COPB1-205ENST00000526527 ATP1A2P50993 1020 aa6.15□□□□□ -1.42
COPB1-205ENST00000526527 ALDH16A1Q8IZ83 802 aa6.15□□□□□ -1.42
COPB1-205ENST00000526527 RAD21O60216 631 aa6.14□□□□□ -1.43
COPB1-205ENST00000526527 HDGFL1Q5TGJ6 251 aa6.14□□□□□ -1.43
COPB1-205ENST00000526527 DHX32Q7L7V1 743 aaKnown RBP6.14□□□□□ -1.43
COPB1-205ENST00000526527 OGFOD1Q8N543 542 aa6.14□□□□□ -1.43
COPB1-205ENST00000526527 TSEN2Q8NCE0 465 aaKnown RBP6.14□□□□□ -1.43
COPB1-205ENST00000526527 UBL7Q96S82 380 aaPredicted RBP6.14□□□□□ -1.43
COPB1-205ENST00000526527 PRR19A6NJB7 356 aa6.13□□□□□ -1.43
COPB1-205ENST00000526527 C21orf2O43822 256 aa6.13□□□□□ -1.43
COPB1-205ENST00000526527 ATP9BO43861 1147 aa6.13□□□□□ -1.43
COPB1-205ENST00000526527 LARGE2Q8N3Y3 721 aa6.13□□□□□ -1.43
COPB1-205ENST00000526527 SMG9Q9H0W8 520 aaKnown RBP6.13□□□□□ -1.43
COPB1-205ENST00000526527 ZFATQ9P243 1243 aa6.13□□□□□ -1.43
COPB1-205ENST00000526527 MKRN1Q9UHC7 482 aaKnown RBP6.13□□□□□ -1.43
COPB1-205ENST00000526527 PALM3A6NDB9 673 aaPredicted RBP6.12□□□□□ -1.43
COPB1-205ENST00000526527 M0R2N6 131 aa6.12□□□□□ -1.43
COPB1-205ENST00000526527 PPP1R12BO60237 982 aaPredicted RBP6.12□□□□□ -1.43
COPB1-205ENST00000526527 DKK1O94907 266 aa6.12□□□□□ -1.43
COPB1-205ENST00000526527 GLB1P16278 677 aa6.12□□□□□ -1.43
COPB1-205ENST00000526527 UBTFP17480 764 aaKnown RBP6.12□□□□□ -1.43
COPB1-205ENST00000526527 GPLD1P80108 840 aa6.12□□□□□ -1.43
COPB1-205ENST00000526527 MLLT1Q03111 559 aaPredicted RBP6.12□□□□□ -1.43
COPB1-205ENST00000526527 NFIAQ12857 509 aa6.12□□□□□ -1.43
COPB1-205ENST00000526527 IER5Q5VY09 327 aa6.12□□□□□ -1.43
COPB1-205ENST00000526527 OGFOD2Q6N063 350 aa6.12□□□□□ -1.43
COPB1-205ENST00000526527 SIX5Q8N196 739 aa6.12□□□□□ -1.43
COPB1-205ENST00000526527 AGGF1Q8N302 714 aaeCLIP6.12□□□□□ -1.43
COPB1-205ENST00000526527 ZNF594Q96JF6 807 aaPredicted RBP6.12□□□□□ -1.43
COPB1-205ENST00000526527 DMGDHQ9UI17 866 aaKnown RBP6.12□□□□□ -1.43
COPB1-205ENST00000526527 DHX15O43143 795 aaKnown RBP6.11□□□□□ -1.43
COPB1-205ENST00000526527 TARSP26639 723 aaKnown RBP6.11□□□□□ -1.43
COPB1-205ENST00000526527 GRNP28799 593 aaKnown RBP6.11□□□□□ -1.43
COPB1-205ENST00000526527 ARMC10Q8N2F6 343 aa6.11□□□□□ -1.43
COPB1-205ENST00000526527 STAG2Q8N3U4 1231 aa6.11□□□□□ -1.43
COPB1-205ENST00000526527 SRA1Q9HD15 236 aaKnown RBP6.11□□□□□ -1.43
COPB1-205ENST00000526527 ATAD2Q6PL18 1390 aa6.1□□□□□ -1.43
COPB1-205ENST00000526527 RNF43Q68DV7 783 aa6.1□□□□□ -1.43
COPB1-205ENST00000526527 HFE2Q6ZVN8 426 aa6.1□□□□□ -1.43
COPB1-205ENST00000526527 ERICH6Q7L0X2 663 aa6.1□□□□□ -1.43
COPB1-205ENST00000526527 DCAF11Q8TEB1 546 aa6.1□□□□□ -1.43
COPB1-205ENST00000526527 IFT43Q96FT9 208 aa6.1□□□□□ -1.43
COPB1-205ENST00000526527 C2orf49Q9BVC5 232 aaPredicted RBP6.1□□□□□ -1.43
COPB1-205ENST00000526527 C8AP07357 584 aa6.09□□□□□ -1.43
COPB1-205ENST00000526527 EPB42P16452 691 aa6.09□□□□□ -1.43
COPB1-205ENST00000526527 FLIIQ13045 1269 aa6.09□□□□□ -1.43
COPB1-205ENST00000526527 SETDB1Q15047 1291 aa6.09□□□□□ -1.43
COPB1-205ENST00000526527 KRT25Q7Z3Z0 450 aa6.09□□□□□ -1.43
COPB1-205ENST00000526527 MAP4K3Q8IVH8 894 aa6.09□□□□□ -1.43
COPB1-205ENST00000526527 IL22RA1Q8N6P7 574 aa6.09□□□□□ -1.43
COPB1-205ENST00000526527 C11orf16Q9NQ32 467 aa6.09□□□□□ -1.43
COPB1-205ENST00000526527 BCS1LQ9Y276 419 aa6.09□□□□□ -1.43
COPB1-205ENST00000526527 TGFBR3LH3BV60 316 aa6.08□□□□□ -1.44
COPB1-205ENST00000526527 INPP5BP32019 993 aa6.08□□□□□ -1.44
COPB1-205ENST00000526527 LCE4AQ5TA78 99 aa6.08□□□□□ -1.44
COPB1-205ENST00000526527 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.08□□□□□ -1.44
COPB1-205ENST00000526527 TRIM42Q8IWZ5 723 aa6.08□□□□□ -1.44
COPB1-205ENST00000526527 POU5F2Q8N7G0 328 aa6.08□□□□□ -1.44
COPB1-205ENST00000526527 CHMP7Q8WUX9 453 aaPredicted RBP6.08□□□□□ -1.44
COPB1-205ENST00000526527 SCG3Q8WXD2 468 aaKnown RBP6.08□□□□□ -1.44
COPB1-205ENST00000526527 NGLY1Q96IV0 654 aa6.08□□□□□ -1.44
COPB1-205ENST00000526527 KRTAP4-11Q9BYQ6 195 aa6.08□□□□□ -1.44
COPB1-205ENST00000526527 C7orf69Q9H7B7 122 aa6.08□□□□□ -1.44
COPB1-205ENST00000526527 RBM19Q9Y4C8 960 aaKnown RBP6.08□□□□□ -1.44
COPB1-205ENST00000526527 SASH3O75995 380 aa6.07□□□□□ -1.44
COPB1-205ENST00000526527 RARAP10276 462 aa6.07□□□□□ -1.44
COPB1-205ENST00000526527 EIF2AK2P19525 551 aaKnown RBP6.07□□□□□ -1.44
COPB1-205ENST00000526527 RASA1P20936 1047 aa6.07□□□□□ -1.44
COPB1-205ENST00000526527 ARID4AP29374 1257 aaPredicted RBP6.07□□□□□ -1.44
COPB1-205ENST00000526527 NRLP54845 237 aa6.07□□□□□ -1.44
COPB1-205ENST00000526527 GAS2L2Q8NHY3 880 aa6.07□□□□□ -1.44
COPB1-205ENST00000526527 PLD4Q96BZ4 506 aa6.07□□□□□ -1.44
COPB1-205ENST00000526527 DBNDD2Q9BQY9 259 aa6.07□□□□□ -1.44
COPB1-205ENST00000526527 HMX2A2RU54 273 aa6.06□□□□□ -1.44
COPB1-205ENST00000526527 LGR5O75473 907 aa6.06□□□□□ -1.44
COPB1-205ENST00000526527 SEC13P55735 322 aa6.06□□□□□ -1.44
COPB1-205ENST00000526527 RTN1Q16799 776 aa6.06□□□□□ -1.44
COPB1-205ENST00000526527 GDF6Q6KF10 455 aaPredicted RBP6.06□□□□□ -1.44
COPB1-205ENST00000526527 CEP41Q9BYV8 373 aa6.06□□□□□ -1.44
COPB1-205ENST00000526527 TFIP11Q9UBB9 837 aaKnown RBP6.06□□□□□ -1.44
COPB1-205ENST00000526527 LOC102724428A0A0B4J2F2 783 aa6.05□□□□□ -1.44
COPB1-205ENST00000526527 J3QW42 95 aa6.05□□□□□ -1.44
COPB1-205ENST00000526527 SIK1P57059 783 aa6.05□□□□□ -1.44
COPB1-205ENST00000526527 UVSSAQ2YD98 709 aa6.05□□□□□ -1.44
COPB1-205ENST00000526527 ABI1Q8IZP0 508 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms