RNA–Protein interactions for RNA: ENST00000524115.2

NKX6-3-202, Transcript of NK6 homeobox 3, humanhuman

TSL 2 BASIC

Gene NKX6-3, Length 1,683 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3-202ENST00000524115 CNTNAP4Q9C0A0 1308 aa27.12■■□□□ 1.93
NKX6-3-202ENST00000524115 ZNF790Q6PG37 636 aa27.11■■□□□ 1.93
NKX6-3-202ENST00000524115 SCN11AQ9UI33 1791 aa27.11■■□□□ 1.93
NKX6-3-202ENST00000524115 IFIT2P09913 472 aaKnown RBP27.11■■□□□ 1.93
NKX6-3-202ENST00000524115 KLHL34Q8N239 644 aa27.11■■□□□ 1.93
NKX6-3-202ENST00000524115 ZGPATQ8N5A5 531 aaKnown RBP27.11■■□□□ 1.93
NKX6-3-202ENST00000524115 MRC1P22897 1456 aa27.1■■□□□ 1.93
NKX6-3-202ENST00000524115 ANXA1P04083 346 aa27.1■■□□□ 1.93
NKX6-3-202ENST00000524115 ZNF445P59923 1031 aa27.1■■□□□ 1.93
NKX6-3-202ENST00000524115 TRAPPC3LQ5T215 181 aa27.1■■□□□ 1.93
NKX6-3-202ENST00000524115 LMBRD1Q9NUN5 540 aa27.1■■□□□ 1.93
NKX6-3-202ENST00000524115 PALD1Q9ULE6 856 aa27.1■■□□□ 1.93
NKX6-3-202ENST00000524115 DIAPH3Q9NSV4 1193 aa27.09■■□□□ 1.93
NKX6-3-202ENST00000524115 RPS6KA4O75676 772 aa27.08■■□□□ 1.93
NKX6-3-202ENST00000524115 G3BP1Q13283 466 aaKnown RBP eCLIP27.08■■□□□ 1.93
NKX6-3-202ENST00000524115 EVI5LQ96CN4 794 aa27.08■■□□□ 1.93
NKX6-3-202ENST00000524115 MBD3O95983 291 aa27.08■■□□□ 1.92
NKX6-3-202ENST00000524115 CRKLP46109 303 aaKnown RBP27.08■■□□□ 1.92
NKX6-3-202ENST00000524115 BRD1O95696 1058 aa27.07■■□□□ 1.92
NKX6-3-202ENST00000524115 PROSER3Q2NL68 480 aa27.07■■□□□ 1.92
NKX6-3-202ENST00000524115 RIC3Q7Z5B4 369 aa27.07■■□□□ 1.92
NKX6-3-202ENST00000524115 ANP32BQ92688 251 aaKnown RBP27.07■■□□□ 1.92
NKX6-3-202ENST00000524115 LSG1Q9H089 658 aaKnown RBP27.07■■□□□ 1.92
NKX6-3-202ENST00000524115 DNAJC10Q8IXB1 793 aa27.06■■□□□ 1.92
NKX6-3-202ENST00000524115 ARHGEF1Q92888 912 aaKnown RBP27.06■■□□□ 1.92
NKX6-3-202ENST00000524115 ADRA2BP18089 450 aa27.05■■□□□ 1.92
NKX6-3-202ENST00000524115 PDIA6Q15084 440 aa27.05■■□□□ 1.92
NKX6-3-202ENST00000524115 ZDHHC9Q9Y397 364 aa27.05■■□□□ 1.92
NKX6-3-202ENST00000524115 ZNF831Q5JPB2 1677 aa27.05■■□□□ 1.92
NKX6-3-202ENST00000524115 COL15A1P39059 1388 aa27.04■■□□□ 1.92
NKX6-3-202ENST00000524115 COL24A1Q17RW2 1714 aa27.04■■□□□ 1.92
NKX6-3-202ENST00000524115 SNRPA1P09661 255 aaKnown RBP27.04■■□□□ 1.92
NKX6-3-202ENST00000524115 TTC5Q8N0Z6 440 aa27.04■■□□□ 1.92
NKX6-3-202ENST00000524115 INTS5Q6P9B9 1019 aaKnown RBP27.03■■□□□ 1.92
NKX6-3-202ENST00000524115 METTL22Q9BUU2 404 aaPredicted RBP27.03■■□□□ 1.92
NKX6-3-202ENST00000524115 UBR3Q6ZT12 1888 aa27.03■■□□□ 1.92
NKX6-3-202ENST00000524115 WDR33Q9C0J8 1336 aaKnown RBP27.03■■□□□ 1.92
NKX6-3-202ENST00000524115 CWF19L2Q2TBE0 894 aaKnown RBP27.02■■□□□ 1.92
NKX6-3-202ENST00000524115 SUCLG2Q96I99 432 aa27.02■■□□□ 1.92
NKX6-3-202ENST00000524115 TM6SF1Q9BZW5 370 aa27.02■■□□□ 1.92
NKX6-3-202ENST00000524115 SNX14Q9Y5W7 946 aa27.02■■□□□ 1.92
NKX6-3-202ENST00000524115 RFC4P35249 363 aa27.01■■□□□ 1.92
NKX6-3-202ENST00000524115 VSIG10Q8N0Z9 540 aa27.01■■□□□ 1.92
NKX6-3-202ENST00000524115 NLGN2Q8NFZ4 835 aa27.01■■□□□ 1.92
NKX6-3-202ENST00000524115 FMNL2Q96PY5 1086 aa27.01■■□□□ 1.92
NKX6-3-202ENST00000524115 PANK2Q9BZ23 570 aa27.01■■□□□ 1.92
NKX6-3-202ENST00000524115 CYP19A1P11511 503 aaPredicted RBP27.01■■□□□ 1.91
NKX6-3-202ENST00000524115 CCDC173Q0VFZ6 552 aa27.01■■□□□ 1.91
NKX6-3-202ENST00000524115 PKP1Q13835 747 aa27.01■■□□□ 1.91
NKX6-3-202ENST00000524115 KCNB2Q92953 911 aa27.01■■□□□ 1.91
NKX6-3-202ENST00000524115 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.01■■□□□ 1.91
NKX6-3-202ENST00000524115 ERBB4Q15303 1308 aa27.01■■□□□ 1.91
NKX6-3-202ENST00000524115 PDIA4P13667 645 aaKnown RBP27■■□□□ 1.91
NKX6-3-202ENST00000524115 AACSQ86V21 672 aa27■■□□□ 1.91
NKX6-3-202ENST00000524115 GAS2L3Q86XJ1 694 aa27■■□□□ 1.91
NKX6-3-202ENST00000524115 CCDC87Q9NVE4 849 aa27■■□□□ 1.91
NKX6-3-202ENST00000524115 NEURL1BA8MQ27 555 aa26.99■■□□□ 1.91
NKX6-3-202ENST00000524115 PRPF40AO75400 957 aaKnown RBP26.99■■□□□ 1.91
NKX6-3-202ENST00000524115 MAP4K4O95819 1239 aaPredicted RBP26.99■■□□□ 1.91
NKX6-3-202ENST00000524115 ZSCAN31Q96LW9 406 aaPredicted RBP26.99■■□□□ 1.91
NKX6-3-202ENST00000524115 LIMCH1Q9UPQ0 1083 aa26.99■■□□□ 1.91
NKX6-3-202ENST00000524115 KCPQ6ZWJ8 1503 aa26.99■■□□□ 1.91
NKX6-3-202ENST00000524115 GCKRQ14397 625 aa26.98■■□□□ 1.91
NKX6-3-202ENST00000524115 CWC27Q6UX04 472 aaKnown RBP26.98■■□□□ 1.91
NKX6-3-202ENST00000524115 NLGN1Q8N2Q7 840 aa26.98■■□□□ 1.91
NKX6-3-202ENST00000524115 ZNF496Q96IT1 587 aaPredicted RBP26.98■■□□□ 1.91
NKX6-3-202ENST00000524115 BICC1Q9H694 974 aaKnown RBP26.98■■□□□ 1.91
NKX6-3-202ENST00000524115 CD2APQ9Y5K6 639 aa26.98■■□□□ 1.91
NKX6-3-202ENST00000524115 PRAMEF22A3QJZ6 481 aa26.98■■□□□ 1.91
NKX6-3-202ENST00000524115 NCLP19338 710 aaKnown RBP26.98■■□□□ 1.91
NKX6-3-202ENST00000524115 AIMP1Q12904 312 aaKnown RBP26.98■■□□□ 1.91
NKX6-3-202ENST00000524115 TRIM44Q96DX7 344 aaPredicted RBP26.98■■□□□ 1.91
NKX6-3-202ENST00000524115 TTC14Q96N46 770 aa26.98■■□□□ 1.91
NKX6-3-202ENST00000524115 SNRKQ9NRH2 765 aa26.98■■□□□ 1.91
NKX6-3-202ENST00000524115 IGKV5-2P06315 115 aa26.97■■□□□ 1.91
NKX6-3-202ENST00000524115 GYS1P13807 737 aa26.97■■□□□ 1.91
NKX6-3-202ENST00000524115 XAGE3Q8WTP9 111 aa26.97■■□□□ 1.91
NKX6-3-202ENST00000524115 SYAP1Q96A49 352 aaPredicted RBP26.97■■□□□ 1.91
NKX6-3-202ENST00000524115 UPF3BQ9BZI7 483 aaKnown RBP26.97■■□□□ 1.91
NKX6-3-202ENST00000524115 MMP10P09238 476 aa26.96■■□□□ 1.91
NKX6-3-202ENST00000524115 ZSCAN23Q3MJ62 389 aa26.96■■□□□ 1.91
NKX6-3-202ENST00000524115 ANKRD13DQ6ZTN6 518 aa26.96■■□□□ 1.91
NKX6-3-202ENST00000524115 KAZALD1Q96I82 304 aa26.96■■□□□ 1.91
NKX6-3-202ENST00000524115 COL5A3P25940 1745 aaPredicted RBP26.96■■□□□ 1.91
NKX6-3-202ENST00000524115 ZKSCAN1P17029 563 aaPredicted RBP26.95■■□□□ 1.91
NKX6-3-202ENST00000524115 NASPP49321 788 aaPredicted RBP26.95■■□□□ 1.91
NKX6-3-202ENST00000524115 CAVIN1Q6NZI2 390 aaKnown RBP26.95■■□□□ 1.91
NKX6-3-202ENST00000524115 IL25Q9H293 177 aa26.95■■□□□ 1.91
NKX6-3-202ENST00000524115 SH2B1Q9NRF2 756 aaPredicted RBP26.95■■□□□ 1.91
NKX6-3-202ENST00000524115 GPR162Q16538 588 aa26.95■■□□□ 1.9
NKX6-3-202ENST00000524115 VPS53Q5VIR6 699 aa26.95■■□□□ 1.9
NKX6-3-202ENST00000524115 COPS6Q7L5N1 327 aa26.95■■□□□ 1.9
NKX6-3-202ENST00000524115 COPRSQ9NQ92 184 aa26.95■■□□□ 1.9
NKX6-3-202ENST00000524115 PA2G4Q9UQ80 394 aaKnown RBP26.95■■□□□ 1.9
NKX6-3-202ENST00000524115 SASH1O94885 1247 aa26.94■■□□□ 1.9
NKX6-3-202ENST00000524115 PPP1R9BQ96SB3 815 aa26.94■■□□□ 1.9
NKX6-3-202ENST00000524115 SRP68Q9UHB9 627 aaKnown RBP26.94■■□□□ 1.9
NKX6-3-202ENST00000524115 STARD3NLO95772 234 aa26.93■■□□□ 1.9
NKX6-3-202ENST00000524115 ZBTB1Q9Y2K1 713 aa26.93■■□□□ 1.9
NKX6-3-202ENST00000524115 ATP6V1DQ9Y5K8 247 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms