RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.3□□□□□ -1.56
SKP1-209ENST00000522552 LIAT1Q6ZQX7 453 aa5.3□□□□□ -1.56
SKP1-209ENST00000522552 IL17RAQ96F46 866 aa5.3□□□□□ -1.56
SKP1-209ENST00000522552 DNAJC7Q99615 494 aa5.3□□□□□ -1.56
SKP1-209ENST00000522552 SPON2Q9BUD6 331 aa5.3□□□□□ -1.56
SKP1-209ENST00000522552 OSBPL7Q9BZF2 842 aa5.3□□□□□ -1.56
SKP1-209ENST00000522552 TMEM260Q9NX78 707 aa5.3□□□□□ -1.56
SKP1-209ENST00000522552 LRFN2Q9ULH4 789 aa5.3□□□□□ -1.56
SKP1-209ENST00000522552 DXOO77932 396 aaKnown RBP5.29□□□□□ -1.56
SKP1-209ENST00000522552 SLC19A1P41440 591 aa5.29□□□□□ -1.56
SKP1-209ENST00000522552 CDKN1CP49918 316 aaPredicted RBP5.29□□□□□ -1.56
SKP1-209ENST00000522552 MMP16P51512 607 aa5.29□□□□□ -1.56
SKP1-209ENST00000522552 EPHA4P54764 986 aa5.29□□□□□ -1.56
SKP1-209ENST00000522552 DNM1Q05193 864 aaKnown RBP5.29□□□□□ -1.56
SKP1-209ENST00000522552 TKFCQ3LXA3 575 aa5.29□□□□□ -1.56
SKP1-209ENST00000522552 C16orf86Q6ZW13 317 aa5.29□□□□□ -1.56
SKP1-209ENST00000522552 JAMLQ86YT9 394 aa5.29□□□□□ -1.56
SKP1-209ENST00000522552 SLC39A13Q96H72 371 aa5.29□□□□□ -1.56
SKP1-209ENST00000522552 FEZ1Q99689 392 aa5.29□□□□□ -1.56
SKP1-209ENST00000522552 QTRT2Q9H974 415 aaKnown RBP5.29□□□□□ -1.56
SKP1-209ENST00000522552 KBTBD4Q9NVX7 518 aa5.29□□□□□ -1.56
SKP1-209ENST00000522552 EFR3BQ9Y2G0 817 aa5.29□□□□□ -1.56
SKP1-209ENST00000522552 MAGEB6P1A0A0J9YX57 407 aa5.28□□□□□ -1.56
SKP1-209ENST00000522552 KIF3BO15066 747 aa5.28□□□□□ -1.56
SKP1-209ENST00000522552 PDGFAP04085 211 aa5.28□□□□□ -1.56
SKP1-209ENST00000522552 BRDTQ58F21 947 aaPredicted RBP5.28□□□□□ -1.56
SKP1-209ENST00000522552 PI16Q6UXB8 463 aa5.28□□□□□ -1.56
SKP1-209ENST00000522552 KIAA0825Q8IV33 1275 aa5.28□□□□□ -1.56
SKP1-209ENST00000522552 GPATCH11Q8N954 259 aa5.28□□□□□ -1.56
SKP1-209ENST00000522552 EDEM1Q92611 657 aa5.28□□□□□ -1.56
SKP1-209ENST00000522552 APBA2Q99767 749 aa5.28□□□□□ -1.56
SKP1-209ENST00000522552 MSRB2Q9Y3D2 182 aa5.28□□□□□ -1.56
SKP1-209ENST00000522552 PPP1R12BO60237 982 aaPredicted RBP5.28□□□□□ -1.56
SKP1-209ENST00000522552 LDHAP00338 332 aaKnown RBP5.28□□□□□ -1.56
SKP1-209ENST00000522552 NOS2P35228 1153 aa5.28□□□□□ -1.56
SKP1-209ENST00000522552 SQSTM1Q13501 440 aa5.28□□□□□ -1.56
SKP1-209ENST00000522552 SAFB2Q14151 953 aaKnown RBP eCLIP5.28□□□□□ -1.56
SKP1-209ENST00000522552 DHX8Q14562 1220 aaKnown RBP5.28□□□□□ -1.56
SKP1-209ENST00000522552 SH3RF1Q7Z6J0 888 aa5.28□□□□□ -1.56
SKP1-209ENST00000522552 SCYL1Q96KG9 808 aa5.28□□□□□ -1.56
SKP1-209ENST00000522552 MPHOSPH6Q99547 160 aaKnown RBP5.28□□□□□ -1.56
SKP1-209ENST00000522552 NUDT12Q9BQG2 462 aa5.28□□□□□ -1.56
SKP1-209ENST00000522552 FAM126AQ9BYI3 521 aaPredicted RBP5.28□□□□□ -1.56
SKP1-209ENST00000522552 DNAJC25Q9H1X3 360 aa5.28□□□□□ -1.56
SKP1-209ENST00000522552 GINM1Q9NU53 330 aa5.28□□□□□ -1.56
SKP1-209ENST00000522552 STRIP2Q9ULQ0 834 aa5.28□□□□□ -1.56
SKP1-209ENST00000522552 RPS6KL1Q9Y6S9 549 aa5.28□□□□□ -1.56
SKP1-209ENST00000522552 TSPAN6O43657 245 aa5.27□□□□□ -1.57
SKP1-209ENST00000522552 PLIN1O60240 522 aa5.27□□□□□ -1.57
SKP1-209ENST00000522552 STAU1O95793 577 aaKnown RBP5.27□□□□□ -1.57
SKP1-209ENST00000522552 MYCP01106 439 aaPredicted RBP5.27□□□□□ -1.57
SKP1-209ENST00000522552 SOX9P48436 509 aa5.27□□□□□ -1.57
SKP1-209ENST00000522552 SCNN1DP51172 638 aa5.27□□□□□ -1.57
SKP1-209ENST00000522552 OS9Q13438 667 aaPredicted RBP5.27□□□□□ -1.57
SKP1-209ENST00000522552 NFE2Q16621 373 aaPredicted RBP5.27□□□□□ -1.57
SKP1-209ENST00000522552 ERFEQ4G0M1 354 aa5.27□□□□□ -1.57
SKP1-209ENST00000522552 KRT26Q7Z3Y9 468 aa5.27□□□□□ -1.57
SKP1-209ENST00000522552 C2orf49Q9BVC5 232 aaPredicted RBP5.27□□□□□ -1.57
SKP1-209ENST00000522552 PCGF6Q9BYE7 350 aa5.27□□□□□ -1.57
SKP1-209ENST00000522552 CCDC113Q9H0I3 377 aa5.27□□□□□ -1.57
SKP1-209ENST00000522552 FAM8A1Q9UBU6 413 aa5.27□□□□□ -1.57
SKP1-209ENST00000522552 STK17AQ9UEE5 414 aa5.27□□□□□ -1.57
SKP1-209ENST00000522552 PRKAG3Q9UGI9 489 aa5.27□□□□□ -1.57
SKP1-209ENST00000522552 ADAMTS1Q9UHI8 967 aa5.27□□□□□ -1.57
SKP1-209ENST00000522552 ATP8A1Q9Y2Q0 1164 aa5.27□□□□□ -1.57
SKP1-209ENST00000522552 LEMD3Q9Y2U8 911 aa5.27□□□□□ -1.57
SKP1-209ENST00000522552 GIPC1O14908 333 aa5.26□□□□□ -1.57
SKP1-209ENST00000522552 CAND2O75155 1236 aa5.26□□□□□ -1.57
SKP1-209ENST00000522552 USP17L7P0C7H9 530 aa5.26□□□□□ -1.57
SKP1-209ENST00000522552 SCTRP47872 440 aa5.26□□□□□ -1.57
SKP1-209ENST00000522552 SYCP2LQ5T4T6 812 aa5.26□□□□□ -1.57
SKP1-209ENST00000522552 ZNF787Q6DD87 383 aa5.26□□□□□ -1.57
SKP1-209ENST00000522552 PPARGC1BQ86YN6 1023 aaKnown RBP5.26□□□□□ -1.57
SKP1-209ENST00000522552 ETFBKMTQ8IXQ9 262 aa5.26□□□□□ -1.57
SKP1-209ENST00000522552 FAM9BQ8IZU0 186 aa5.26□□□□□ -1.57
SKP1-209ENST00000522552 CELF2-AS1Q8N7Q2 184 aa5.26□□□□□ -1.57
SKP1-209ENST00000522552 R3HCC1Q9Y3T6 440 aaKnown RBP5.26□□□□□ -1.57
SKP1-209ENST00000522552 BACH1O14867 736 aa5.25□□□□□ -1.57
SKP1-209ENST00000522552 ALDH1L1O75891 902 aa5.25□□□□□ -1.57
SKP1-209ENST00000522552 POU3F3P20264 500 aaPredicted RBP5.25□□□□□ -1.57
SKP1-209ENST00000522552 PTMSP20962 102 aa5.25□□□□□ -1.57
SKP1-209ENST00000522552 IRS1P35568 1242 aa5.25□□□□□ -1.57
SKP1-209ENST00000522552 GDF10P55107 478 aa5.25□□□□□ -1.57
SKP1-209ENST00000522552 TBCELQ5QJ74 424 aa5.25□□□□□ -1.57
SKP1-209ENST00000522552 ZNF697Q5TEC3 545 aa5.25□□□□□ -1.57
SKP1-209ENST00000522552 SPRYD7Q5W111 196 aa5.25□□□□□ -1.57
SKP1-209ENST00000522552 PTCRAQ6ISU1 281 aaPredicted RBP5.25□□□□□ -1.57
SKP1-209ENST00000522552 KRBA2Q6ZNG9 492 aa5.25□□□□□ -1.57
SKP1-209ENST00000522552 ANAPC16Q96DE5 110 aa5.25□□□□□ -1.57
SKP1-209ENST00000522552 MYO19Q96H55 970 aa5.25□□□□□ -1.57
SKP1-209ENST00000522552 EAF1Q96JC9 268 aaPredicted RBP5.25□□□□□ -1.57
SKP1-209ENST00000522552 ARNT2Q9HBZ2 717 aa5.25□□□□□ -1.57
SKP1-209ENST00000522552 CHST12Q9NRB3 414 aa5.25□□□□□ -1.57
SKP1-209ENST00000522552 SFMBT1Q9UHJ3 866 aa5.25□□□□□ -1.57
SKP1-209ENST00000522552 TNFRSF10AO00220 468 aa5.24□□□□□ -1.57
SKP1-209ENST00000522552 WASLO00401 505 aaPredicted RBP5.24□□□□□ -1.57
SKP1-209ENST00000522552 KCNQ2O43526 872 aa5.24□□□□□ -1.57
SKP1-209ENST00000522552 CPNE3O75131 537 aaKnown RBP5.24□□□□□ -1.57
SKP1-209ENST00000522552 KIF4AO95239 1232 aa5.24□□□□□ -1.57
SKP1-209ENST00000522552 KRT18P05783 430 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms