RNA–Protein interactions for RNA: ENST00000522381.1

CLINT1-205, Transcript of clathrin interactor 1, humanhuman

TSL 5

Gene CLINT1, Length 721 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-205ENST00000522381 SPRYD3Q8NCJ5 442 aa12.96□□□□□ -0.33
CLINT1-205ENST00000522381 SMC1BQ8NDV3 1235 aa12.96□□□□□ -0.33
CLINT1-205ENST00000522381 KLRG1Q96E93 195 aa12.96□□□□□ -0.33
CLINT1-205ENST00000522381 H0YIN7 160 aa12.95□□□□□ -0.34
CLINT1-205ENST00000522381 TSR1Q2NL82 804 aaKnown RBP12.95□□□□□ -0.34
CLINT1-205ENST00000522381 CCER1Q8TC90 406 aaPredicted RBP12.95□□□□□ -0.34
CLINT1-205ENST00000522381 TEX13AQ9BXU3 409 aaPredicted RBP12.95□□□□□ -0.34
CLINT1-205ENST00000522381 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.95□□□□□ -0.34
CLINT1-205ENST00000522381 COL3A1P02461 1466 aaPredicted RBP12.95□□□□□ -0.34
CLINT1-205ENST00000522381 NPC1L1Q9UHC9 1359 aa12.94□□□□□ -0.34
CLINT1-205ENST00000522381 GLTPD2A6NH11 291 aa12.94□□□□□ -0.34
CLINT1-205ENST00000522381 PER1O15534 1290 aaPredicted RBP12.94□□□□□ -0.34
CLINT1-205ENST00000522381 VEGFAP15692 232 aaPredicted RBP12.94□□□□□ -0.34
CLINT1-205ENST00000522381 CANXP27824 592 aaKnown RBP12.94□□□□□ -0.34
CLINT1-205ENST00000522381 EIF5P55010 431 aaKnown RBP12.94□□□□□ -0.34
CLINT1-205ENST00000522381 RASSF7Q02833 373 aa12.94□□□□□ -0.34
CLINT1-205ENST00000522381 TEFQ10587 303 aa12.94□□□□□ -0.34
CLINT1-205ENST00000522381 PDIA6Q15084 440 aa12.94□□□□□ -0.34
CLINT1-205ENST00000522381 C2CD5Q86YS7 1000 aa12.94□□□□□ -0.34
CLINT1-205ENST00000522381 HEG1Q9ULI3 1381 aa12.94□□□□□ -0.34
CLINT1-205ENST00000522381 GNAT3A8MTJ3 354 aa12.93□□□□□ -0.34
CLINT1-205ENST00000522381 NRG2O14511 850 aaPredicted RBP12.93□□□□□ -0.34
CLINT1-205ENST00000522381 PACS2Q86VP3 889 aa12.93□□□□□ -0.34
CLINT1-205ENST00000522381 GAS2L2Q8NHY3 880 aa12.93□□□□□ -0.34
CLINT1-205ENST00000522381 LRCH3Q96II8 777 aa12.93□□□□□ -0.34
CLINT1-205ENST00000522381 HPS5Q9UPZ3 1129 aa12.93□□□□□ -0.34
CLINT1-205ENST00000522381 CARMIL3Q8ND23 1372 aa12.93□□□□□ -0.34
CLINT1-205ENST00000522381 SCN4AP35499 1836 aa12.92□□□□□ -0.34
CLINT1-205ENST00000522381 SLX4Q8IY92 1834 aa12.92□□□□□ -0.34
CLINT1-205ENST00000522381 SPDYE16A6NNV3 312 aaPredicted RBP12.92□□□□□ -0.34
CLINT1-205ENST00000522381 PDE6BP35913 854 aa12.92□□□□□ -0.34
CLINT1-205ENST00000522381 IL6STP40189 918 aaPredicted RBP12.92□□□□□ -0.34
CLINT1-205ENST00000522381 ZNF790Q6PG37 636 aa12.92□□□□□ -0.34
CLINT1-205ENST00000522381 BRIP1Q9BX63 1249 aa12.92□□□□□ -0.34
CLINT1-205ENST00000522381 TSR3Q9UJK0 312 aaKnown RBP12.92□□□□□ -0.34
CLINT1-205ENST00000522381 HTRA3P83110 453 aa12.91□□□□□ -0.34
CLINT1-205ENST00000522381 CC2D1BQ5T0F9 858 aaKnown RBP12.91□□□□□ -0.34
CLINT1-205ENST00000522381 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.91□□□□□ -0.34
CLINT1-205ENST00000522381 TSKSQ9UJT2 592 aa12.91□□□□□ -0.34
CLINT1-205ENST00000522381 NFKBIEO00221 500 aa12.9□□□□□ -0.34
CLINT1-205ENST00000522381 PRELPP51888 382 aa12.9□□□□□ -0.34
CLINT1-205ENST00000522381 TBC1D9BQ66K14 1250 aa12.9□□□□□ -0.34
CLINT1-205ENST00000522381 BICDL1Q6ZP65 573 aa12.9□□□□□ -0.34
CLINT1-205ENST00000522381 NPM2Q86SE8 214 aaKnown RBP12.9□□□□□ -0.34
CLINT1-205ENST00000522381 IL17REQ8NFR9 667 aa12.9□□□□□ -0.34
CLINT1-205ENST00000522381 ZNF496Q96IT1 587 aaPredicted RBP12.9□□□□□ -0.34
CLINT1-205ENST00000522381 FMNL2Q96PY5 1086 aa12.9□□□□□ -0.34
CLINT1-205ENST00000522381 CEMIPQ8WUJ3 1361 aa12.9□□□□□ -0.34
CLINT1-205ENST00000522381 LTBP3Q9NS15 1303 aa12.89□□□□□ -0.35
CLINT1-205ENST00000522381 LAMB4A4D0S4 1761 aa12.89□□□□□ -0.35
CLINT1-205ENST00000522381 U2SURPO15042 1029 aaKnown RBP12.89□□□□□ -0.35
CLINT1-205ENST00000522381 DLG5Q8TDM6 1919 aa12.88□□□□□ -0.35
CLINT1-205ENST00000522381 E2F4Q16254 413 aa12.88□□□□□ -0.35
CLINT1-205ENST00000522381 PRR5LQ6MZQ0 368 aa12.88□□□□□ -0.35
CLINT1-205ENST00000522381 ZNF622Q969S3 477 aaKnown RBP eCLIP12.88□□□□□ -0.35
CLINT1-205ENST00000522381 SETDB2Q96T68 719 aa12.88□□□□□ -0.35
CLINT1-205ENST00000522381 PRKD2Q9BZL6 878 aa12.88□□□□□ -0.35
CLINT1-205ENST00000522381 ST5P78524 1137 aa12.87□□□□□ -0.35
CLINT1-205ENST00000522381 ERFEQ4G0M1 354 aa12.87□□□□□ -0.35
CLINT1-205ENST00000522381 SOGA3Q5TF21 947 aa12.87□□□□□ -0.35
CLINT1-205ENST00000522381 CNBD1Q8NA66 436 aa12.87□□□□□ -0.35
CLINT1-205ENST00000522381 CNKSR1Q969H4 720 aa12.87□□□□□ -0.35
CLINT1-205ENST00000522381 TBC1D2BQ9UPU7 963 aa12.87□□□□□ -0.35
CLINT1-205ENST00000522381 ZNF330Q9Y3S2 320 aaPredicted RBP12.87□□□□□ -0.35
CLINT1-205ENST00000522381 NUP98P52948 1817 aa12.86□□□□□ -0.35
CLINT1-205ENST00000522381 GRXCR2A6NFK2 248 aa12.86□□□□□ -0.35
CLINT1-205ENST00000522381 BTBD11A6QL63 1104 aa12.86□□□□□ -0.35
CLINT1-205ENST00000522381 NPHP1O15259 732 aa12.86□□□□□ -0.35
CLINT1-205ENST00000522381 C21orf2O43822 256 aa12.86□□□□□ -0.35
CLINT1-205ENST00000522381 STYK1Q6J9G0 422 aa12.86□□□□□ -0.35
CLINT1-205ENST00000522381 CFAP53Q96M91 514 aa12.86□□□□□ -0.35
CLINT1-205ENST00000522381 TAOK3Q9H2K8 898 aa12.86□□□□□ -0.35
CLINT1-205ENST00000522381 WDR70Q9NW82 654 aa12.86□□□□□ -0.35
CLINT1-205ENST00000522381 POTECB2RU33 542 aa12.85□□□□□ -0.35
CLINT1-205ENST00000522381 SMAPO00193 183 aa12.85□□□□□ -0.35
CLINT1-205ENST00000522381 CAMTA2O94983 1202 aa12.85□□□□□ -0.35
CLINT1-205ENST00000522381 COL13A1Q5TAT6 717 aaPredicted RBP12.85□□□□□ -0.35
CLINT1-205ENST00000522381 CLEC4GQ6UXB4 293 aa12.85□□□□□ -0.35
CLINT1-205ENST00000522381 DZIP3Q86Y13 1208 aaKnown RBP12.85□□□□□ -0.35
CLINT1-205ENST00000522381 CDCA7LQ96GN5 454 aa12.85□□□□□ -0.35
CLINT1-205ENST00000522381 A1BGP04217 495 aa12.84□□□□□ -0.35
CLINT1-205ENST00000522381 SRGNP10124 158 aa12.84□□□□□ -0.35
CLINT1-205ENST00000522381 PPP4CP60510 307 aa12.84□□□□□ -0.35
CLINT1-205ENST00000522381 MASTLQ96GX5 879 aa12.84□□□□□ -0.35
CLINT1-205ENST00000522381 CFAP44Q96MT7 982 aa12.84□□□□□ -0.35
CLINT1-205ENST00000522381 ZNF652Q9Y2D9 606 aa12.84□□□□□ -0.35
CLINT1-205ENST00000522381 KDM3BQ7LBC6 1761 aa12.84□□□□□ -0.35
CLINT1-205ENST00000522381 PRKAR2BP31323 418 aa12.83□□□□□ -0.36
CLINT1-205ENST00000522381 PRSS12P56730 875 aa12.83□□□□□ -0.36
CLINT1-205ENST00000522381 PRPF40BQ6NWY9 871 aaKnown RBP12.83□□□□□ -0.36
CLINT1-205ENST00000522381 RSPH6AQ9H0K4 717 aa12.83□□□□□ -0.36
CLINT1-205ENST00000522381 NUDCQ9Y266 331 aa12.83□□□□□ -0.36
CLINT1-205ENST00000522381 SNRPA1P09661 255 aaKnown RBP12.82□□□□□ -0.36
CLINT1-205ENST00000522381 PAXIP1Q6ZW49 1069 aaPredicted RBP12.82□□□□□ -0.36
CLINT1-205ENST00000522381 CCDC24Q8N4L8 307 aa12.82□□□□□ -0.36
CLINT1-205ENST00000522381 RTF1Q92541 710 aaKnown RBP12.82□□□□□ -0.36
CLINT1-205ENST00000522381 IQCA1LA6NCM1 817 aa12.81□□□□□ -0.36
CLINT1-205ENST00000522381 HSPA1AP0DMV8 641 aaKnown RBP12.81□□□□□ -0.36
CLINT1-205ENST00000522381 HSPA1BP0DMV9 641 aaKnown RBP12.81□□□□□ -0.36
CLINT1-205ENST00000522381 CCDC93Q567U6 631 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms