RNA–Protein interactions for RNA: ENST00000521550.5

SPIDR-214, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,849 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-214ENST00000521550 AMIGO3Q86WK7 504 aa17.01■□□□□ 0.31
SPIDR-214ENST00000521550 BICC1Q9H694 974 aaKnown RBP17.01■□□□□ 0.31
SPIDR-214ENST00000521550 DIAPH3Q9NSV4 1193 aa17.01■□□□□ 0.31
SPIDR-214ENST00000521550 FOXD4L1Q9NU39 408 aa17.01■□□□□ 0.31
SPIDR-214ENST00000521550 AK9Q5TCS8 1911 aa17.01■□□□□ 0.31
SPIDR-214ENST00000521550 GNPATO15228 680 aa17■□□□□ 0.31
SPIDR-214ENST00000521550 PLBD2Q8NHP8 589 aa17■□□□□ 0.31
SPIDR-214ENST00000521550 IL17RAQ96F46 866 aa17■□□□□ 0.31
SPIDR-214ENST00000521550 IGKV5-2P06315 115 aa17■□□□□ 0.31
SPIDR-214ENST00000521550 YY1P25490 414 aa17■□□□□ 0.31
SPIDR-214ENST00000521550 EVI5LQ96CN4 794 aa17■□□□□ 0.31
SPIDR-214ENST00000521550 USP16Q9Y5T5 823 aa17■□□□□ 0.31
SPIDR-214ENST00000521550 COL5A3P25940 1745 aaPredicted RBP16.99■□□□□ 0.31
SPIDR-214ENST00000521550 COL15A1P39059 1388 aa16.99■□□□□ 0.31
SPIDR-214ENST00000521550 CLEC17AQ6ZS10 378 aa16.99■□□□□ 0.31
SPIDR-214ENST00000521550 SMIM5Q71RC9 77 aa16.99■□□□□ 0.31
SPIDR-214ENST00000521550 AACSQ86V21 672 aa16.99■□□□□ 0.31
SPIDR-214ENST00000521550 SLC4A9Q96Q91 983 aa16.99■□□□□ 0.31
SPIDR-214ENST00000521550 ISY1Q9ULR0 285 aaKnown RBP16.99■□□□□ 0.31
SPIDR-214ENST00000521550 SGSM2O43147 1006 aa16.98■□□□□ 0.31
SPIDR-214ENST00000521550 LAMB4A4D0S4 1761 aa16.98■□□□□ 0.31
SPIDR-214ENST00000521550 PTCD1O75127 700 aaKnown RBP16.98■□□□□ 0.31
SPIDR-214ENST00000521550 CHD4Q14839 1912 aa16.97■□□□□ 0.31
SPIDR-214ENST00000521550 HSPA4P34932 840 aa16.97■□□□□ 0.31
SPIDR-214ENST00000521550 GOLGA6L3A6NEY3 463 aa16.96■□□□□ 0.31
SPIDR-214ENST00000521550 PA2G4Q9UQ80 394 aaKnown RBP16.96■□□□□ 0.31
SPIDR-214ENST00000521550 RTCBQ9Y3I0 505 aaKnown RBP16.96■□□□□ 0.31
SPIDR-214ENST00000521550 MYH14Q7Z406 1995 aaKnown RBP16.96■□□□□ 0.31
SPIDR-214ENST00000521550 RAD50Q92878 1312 aa16.96■□□□□ 0.31
SPIDR-214ENST00000521550 MAP4K4O95819 1239 aaPredicted RBP16.96■□□□□ 0.3
SPIDR-214ENST00000521550 RC3H1Q5TC82 1133 aaKnown RBP16.96■□□□□ 0.3
SPIDR-214ENST00000521550 INTS4Q96HW7 963 aaKnown RBP16.96■□□□□ 0.3
SPIDR-214ENST00000521550 GPR162Q16538 588 aa16.95■□□□□ 0.3
SPIDR-214ENST00000521550 LRP10Q7Z4F1 713 aa16.95■□□□□ 0.3
SPIDR-214ENST00000521550 NLGN2Q8NFZ4 835 aa16.95■□□□□ 0.3
SPIDR-214ENST00000521550 KAZALD1Q96I82 304 aa16.95■□□□□ 0.3
SPIDR-214ENST00000521550 TEX13AQ9BXU3 409 aaPredicted RBP16.95■□□□□ 0.3
SPIDR-214ENST00000521550 COPRSQ9NQ92 184 aa16.95■□□□□ 0.3
SPIDR-214ENST00000521550 CNTNAP4Q9C0A0 1308 aa16.95■□□□□ 0.3
SPIDR-214ENST00000521550 TRAPPC3LQ5T215 181 aa16.94■□□□□ 0.3
SPIDR-214ENST00000521550 A0A087WZG4 1122 aa16.93■□□□□ 0.3
SPIDR-214ENST00000521550 CWC27Q6UX04 472 aaKnown RBP16.93■□□□□ 0.3
SPIDR-214ENST00000521550 TMX3Q96JJ7 454 aa16.93■□□□□ 0.3
SPIDR-214ENST00000521550 SASH1O94885 1247 aa16.93■□□□□ 0.3
SPIDR-214ENST00000521550 ADRA2BP18089 450 aa16.93■□□□□ 0.3
SPIDR-214ENST00000521550 RABL6Q3YEC7 729 aaPredicted RBP16.93■□□□□ 0.3
SPIDR-214ENST00000521550 CD2APQ9Y5K6 639 aa16.93■□□□□ 0.3
SPIDR-214ENST00000521550 TJP1Q07157 1748 aa16.93■□□□□ 0.3
SPIDR-214ENST00000521550 CICQ96RK0 1608 aaPredicted RBP16.92■□□□□ 0.3
SPIDR-214ENST00000521550 RPS6KA4O75676 772 aa16.92■□□□□ 0.3
SPIDR-214ENST00000521550 UBE3BQ7Z3V4 1068 aa16.92■□□□□ 0.3
SPIDR-214ENST00000521550 CWC25Q9NXE8 425 aaPredicted RBP16.92■□□□□ 0.3
SPIDR-214ENST00000521550 BAG4O95429 457 aaKnown RBP16.91■□□□□ 0.3
SPIDR-214ENST00000521550 CUL4AQ13619 759 aa16.91■□□□□ 0.3
SPIDR-214ENST00000521550 LSG1Q9H089 658 aaKnown RBP16.91■□□□□ 0.3
SPIDR-214ENST00000521550 SIL1Q9H173 461 aa16.91■□□□□ 0.3
SPIDR-214ENST00000521550 AFDNP55196 1824 aaKnown RBP16.91■□□□□ 0.3
SPIDR-214ENST00000521550 ARFGEF2Q9Y6D5 1785 aa16.91■□□□□ 0.3
SPIDR-214ENST00000521550 ZKSCAN1P17029 563 aaPredicted RBP16.91■□□□□ 0.3
SPIDR-214ENST00000521550 RFC4P35249 363 aa16.91■□□□□ 0.3
SPIDR-214ENST00000521550 CRKLP46109 303 aaKnown RBP16.91■□□□□ 0.3
SPIDR-214ENST00000521550 ARHGEF1Q92888 912 aaKnown RBP16.91■□□□□ 0.3
SPIDR-214ENST00000521550 EAF2Q96CJ1 260 aaPredicted RBP16.91■□□□□ 0.3
SPIDR-214ENST00000521550 PALD1Q9ULE6 856 aa16.91■□□□□ 0.3
SPIDR-214ENST00000521550 C4AP0C0L4 1744 aa16.9■□□□□ 0.3
SPIDR-214ENST00000521550 CCDC191Q8NCU4 936 aa16.9■□□□□ 0.3
SPIDR-214ENST00000521550 GZF1Q9H116 711 aaPredicted RBP16.9■□□□□ 0.3
SPIDR-214ENST00000521550 CYP2E1P05181 493 aaPredicted RBP16.89■□□□□ 0.29
SPIDR-214ENST00000521550 CCDC8Q9H0W5 538 aaPredicted RBP16.89■□□□□ 0.29
SPIDR-214ENST00000521550 UBR2Q8IWV8 1755 aa16.89■□□□□ 0.29
SPIDR-214ENST00000521550 ATP5J2-PTCD1G3V325 749 aa16.89■□□□□ 0.29
SPIDR-214ENST00000521550 H7C1W4 665 aa16.89■□□□□ 0.29
SPIDR-214ENST00000521550 KCNJ4P48050 445 aa16.89■□□□□ 0.29
SPIDR-214ENST00000521550 RNF20Q5VTR2 975 aa16.89■□□□□ 0.29
SPIDR-214ENST00000521550 VSIG10Q8N0Z9 540 aa16.89■□□□□ 0.29
SPIDR-214ENST00000521550 NLGN1Q8N2Q7 840 aa16.89■□□□□ 0.29
SPIDR-214ENST00000521550 FSD1Q9BTV5 496 aa16.89■□□□□ 0.29
SPIDR-214ENST00000521550 MMP10P09238 476 aa16.88■□□□□ 0.29
SPIDR-214ENST00000521550 MRE11P49959 708 aa16.88■□□□□ 0.29
SPIDR-214ENST00000521550 TICAM2Q86XR7 235 aa16.88■□□□□ 0.29
SPIDR-214ENST00000521550 DNAJC10Q8IXB1 793 aa16.88■□□□□ 0.29
SPIDR-214ENST00000521550 SNX14Q9Y5W7 946 aa16.88■□□□□ 0.29
SPIDR-214ENST00000521550 STARD3NLO95772 234 aa16.87■□□□□ 0.29
SPIDR-214ENST00000521550 ATP5JP18859 108 aa16.87■□□□□ 0.29
SPIDR-214ENST00000521550 PSMA5P28066 241 aa16.87■□□□□ 0.29
SPIDR-214ENST00000521550 PIP4K2AP48426 406 aaPredicted RBP16.87■□□□□ 0.29
SPIDR-214ENST00000521550 ZGPATQ8N5A5 531 aaKnown RBP16.87■□□□□ 0.29
SPIDR-214ENST00000521550 TM6SF1Q9BZW5 370 aa16.87■□□□□ 0.29
SPIDR-214ENST00000521550 KCPQ6ZWJ8 1503 aa16.87■□□□□ 0.29
SPIDR-214ENST00000521550 NBPF26B4DH59 902 aa16.86■□□□□ 0.29
SPIDR-214ENST00000521550 PTPN12Q05209 780 aaKnown RBP16.86■□□□□ 0.29
SPIDR-214ENST00000521550 KLHL40Q2TBA0 621 aa16.86■□□□□ 0.29
SPIDR-214ENST00000521550 TNNI3KQ59H18 835 aa16.86■□□□□ 0.29
SPIDR-214ENST00000521550 EPHA10Q5JZY3 1008 aa16.86■□□□□ 0.29
SPIDR-214ENST00000521550 MCTP1Q6DN14 999 aa16.86■□□□□ 0.29
SPIDR-214ENST00000521550 NBPF10Q6P3W6 841 aaKnown RBP16.86■□□□□ 0.29
SPIDR-214ENST00000521550 KIF6Q6ZMV9 814 aa16.86■□□□□ 0.29
SPIDR-214ENST00000521550 NBPF15Q8N660 670 aa16.86■□□□□ 0.29
SPIDR-214ENST00000521550 UPF3BQ9BZI7 483 aaKnown RBP16.86■□□□□ 0.29
SPIDR-214ENST00000521550 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms