RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 SLC52A2Q9HAB3 445 aa13.23□□□□□ -0.29
PCDHGB4-201ENST00000519479 KDM4FA0A1W2PPD8 638 aa13.23□□□□□ -0.29
PCDHGB4-201ENST00000519479 SYT1P21579 422 aa13.23□□□□□ -0.29
PCDHGB4-201ENST00000519479 MCMDC2Q4G0Z9 681 aa13.23□□□□□ -0.29
PCDHGB4-201ENST00000519479 VPS53Q5VIR6 699 aa13.23□□□□□ -0.29
PCDHGB4-201ENST00000519479 GIMAP6Q6P9H5 292 aa13.23□□□□□ -0.29
PCDHGB4-201ENST00000519479 HOMER1Q86YM7 354 aa13.23□□□□□ -0.29
PCDHGB4-201ENST00000519479 JMYQ8N9B5 988 aa13.23□□□□□ -0.29
PCDHGB4-201ENST00000519479 ZNF496Q96IT1 587 aaPredicted RBP13.23□□□□□ -0.29
PCDHGB4-201ENST00000519479 SMC2O95347 1197 aa13.23□□□□□ -0.29
PCDHGB4-201ENST00000519479 XBP1P17861 261 aa13.23□□□□□ -0.29
PCDHGB4-201ENST00000519479 RBM10P98175 930 aaKnown RBP13.23□□□□□ -0.29
PCDHGB4-201ENST00000519479 METTL22Q9BUU2 404 aaPredicted RBP13.23□□□□□ -0.29
PCDHGB4-201ENST00000519479 OSBPL3Q9H4L5 887 aa13.23□□□□□ -0.29
PCDHGB4-201ENST00000519479 CCDC69A6NI79 296 aa13.22□□□□□ -0.29
PCDHGB4-201ENST00000519479 RRP9O43818 475 aaKnown RBP13.22□□□□□ -0.29
PCDHGB4-201ENST00000519479 CLCN1P35523 988 aa13.22□□□□□ -0.29
PCDHGB4-201ENST00000519479 TDO2P48775 406 aa13.22□□□□□ -0.29
PCDHGB4-201ENST00000519479 PKP1Q13835 747 aa13.22□□□□□ -0.29
PCDHGB4-201ENST00000519479 GNL3LQ9NVN8 582 aaKnown RBP13.22□□□□□ -0.29
PCDHGB4-201ENST00000519479 PPLO60437 1756 aa13.22□□□□□ -0.29
PCDHGB4-201ENST00000519479 HSPA4P34932 840 aa13.22□□□□□ -0.29
PCDHGB4-201ENST00000519479 IL15P40933 162 aaPredicted RBP13.22□□□□□ -0.29
PCDHGB4-201ENST00000519479 OLFM4Q6UX06 510 aa13.22□□□□□ -0.29
PCDHGB4-201ENST00000519479 RUFY3Q7L099 469 aa13.22□□□□□ -0.29
PCDHGB4-201ENST00000519479 CDC42BPGQ6DT37 1551 aa13.22□□□□□ -0.29
PCDHGB4-201ENST00000519479 ANKRD18BA2A2Z9 1011 aa13.22□□□□□ -0.29
PCDHGB4-201ENST00000519479 ZNF213O14771 459 aa13.22□□□□□ -0.29
PCDHGB4-201ENST00000519479 HSP90AB3PQ58FF7 597 aa13.22□□□□□ -0.29
PCDHGB4-201ENST00000519479 TRIM22Q8IYM9 498 aa13.22□□□□□ -0.29
PCDHGB4-201ENST00000519479 FAM227BQ96M60 508 aa13.22□□□□□ -0.29
PCDHGB4-201ENST00000519479 LRP2BPQ9P2M1 347 aa13.22□□□□□ -0.29
PCDHGB4-201ENST00000519479 CDKL5O76039 1030 aa13.22□□□□□ -0.29
PCDHGB4-201ENST00000519479 ARHGEF25Q86VW2 580 aa13.22□□□□□ -0.29
PCDHGB4-201ENST00000519479 BCL11BQ9C0K0 894 aaPredicted RBP13.22□□□□□ -0.29
PCDHGB4-201ENST00000519479 ZNF652Q9Y2D9 606 aa13.22□□□□□ -0.29
PCDHGB4-201ENST00000519479 SPATA31A3Q5VYP0 1347 aa13.21□□□□□ -0.29
PCDHGB4-201ENST00000519479 UNC5CLQ8IV45 518 aa13.21□□□□□ -0.29
PCDHGB4-201ENST00000519479 MAP7D2Q96T17 732 aa13.21□□□□□ -0.29
PCDHGB4-201ENST00000519479 NUP133Q8WUM0 1156 aa13.21□□□□□ -0.29
PCDHGB4-201ENST00000519479 GCKRQ14397 625 aa13.21□□□□□ -0.3
PCDHGB4-201ENST00000519479 C8orf76Q96K31 380 aa13.21□□□□□ -0.3
PCDHGB4-201ENST00000519479 LMBRD1Q9NUN5 540 aa13.21□□□□□ -0.3
PCDHGB4-201ENST00000519479 DTNBO60941 627 aa13.2□□□□□ -0.3
PCDHGB4-201ENST00000519479 IGHMBP2P38935 993 aaKnown RBP13.2□□□□□ -0.3
PCDHGB4-201ENST00000519479 CEP57L1Q8IYX8 460 aa13.2□□□□□ -0.3
PCDHGB4-201ENST00000519479 ABCF2Q9UG63 623 aa13.2□□□□□ -0.3
PCDHGB4-201ENST00000519479 Q6ZUG5 572 aa13.2□□□□□ -0.3
PCDHGB4-201ENST00000519479 STAP2Q9UGK3 403 aa13.2□□□□□ -0.3
PCDHGB4-201ENST00000519479 GOLGA8BA8MQT2 603 aa13.2□□□□□ -0.3
PCDHGB4-201ENST00000519479 ADCY5O95622 1261 aa13.2□□□□□ -0.3
PCDHGB4-201ENST00000519479 PROSER3Q2NL68 480 aa13.2□□□□□ -0.3
PCDHGB4-201ENST00000519479 DDX19AQ9NUU7 478 aaKnown RBP13.2□□□□□ -0.3
PCDHGB4-201ENST00000519479 PAG1Q9NWQ8 432 aa13.2□□□□□ -0.3
PCDHGB4-201ENST00000519479 MTMR7Q9Y216 660 aa13.2□□□□□ -0.3
PCDHGB4-201ENST00000519479 MYO3AQ8NEV4 1616 aa13.2□□□□□ -0.3
PCDHGB4-201ENST00000519479 ZNF771Q7L3S4 317 aaPredicted RBP13.2□□□□□ -0.3
PCDHGB4-201ENST00000519479 BRMS1Q9HCU9 246 aa13.2□□□□□ -0.3
PCDHGB4-201ENST00000519479 DCCP43146 1447 aa13.19□□□□□ -0.3
PCDHGB4-201ENST00000519479 C1orf167Q5SNV9 1468 aa13.19□□□□□ -0.3
PCDHGB4-201ENST00000519479 UQCRHLA0A096LP55 91 aa13.19□□□□□ -0.3
PCDHGB4-201ENST00000519479 UQCRHP07919 91 aa13.19□□□□□ -0.3
PCDHGB4-201ENST00000519479 DBNDD2Q9BQY9 259 aa13.19□□□□□ -0.3
PCDHGB4-201ENST00000519479 RAI14Q9P0K7 980 aa13.19□□□□□ -0.3
PCDHGB4-201ENST00000519479 MARCH6O60337 910 aa13.19□□□□□ -0.3
PCDHGB4-201ENST00000519479 FILIP1Q7Z7B0 1213 aa13.19□□□□□ -0.3
PCDHGB4-201ENST00000519479 NAPBQ9H115 298 aa13.19□□□□□ -0.3
PCDHGB4-201ENST00000519479 TPM1P09493 284 aa13.18□□□□□ -0.3
PCDHGB4-201ENST00000519479 TIMM10P62072 90 aa13.18□□□□□ -0.3
PCDHGB4-201ENST00000519479 TNNI3KQ59H18 835 aa13.18□□□□□ -0.3
PCDHGB4-201ENST00000519479 RAB11FIP4Q86YS3 637 aa13.18□□□□□ -0.3
PCDHGB4-201ENST00000519479 PLBD2Q8NHP8 589 aa13.18□□□□□ -0.3
PCDHGB4-201ENST00000519479 RBSNQ9H1K0 784 aa13.18□□□□□ -0.3
PCDHGB4-201ENST00000519479 FPGT-TNNI3KV9GXZ4 949 aa13.18□□□□□ -0.3
PCDHGB4-201ENST00000519479 USP31Q70CQ4 1352 aa13.18□□□□□ -0.3
PCDHGB4-201ENST00000519479 BICDL1Q6ZP65 573 aa13.18□□□□□ -0.3
PCDHGB4-201ENST00000519479 UBAC1Q9BSL1 405 aa13.18□□□□□ -0.3
PCDHGB4-201ENST00000519479 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.18□□□□□ -0.3
PCDHGB4-201ENST00000519479 RRAGDQ9NQL2 400 aaPredicted RBP13.18□□□□□ -0.3
PCDHGB4-201ENST00000519479 USP16Q9Y5T5 823 aa13.18□□□□□ -0.3
PCDHGB4-201ENST00000519479 EAF2Q96CJ1 260 aaPredicted RBP13.18□□□□□ -0.3
PCDHGB4-201ENST00000519479 NEURL1BA8MQ27 555 aa13.17□□□□□ -0.3
PCDHGB4-201ENST00000519479 SLC27A2O14975 620 aa13.17□□□□□ -0.3
PCDHGB4-201ENST00000519479 BRD1O95696 1058 aa13.17□□□□□ -0.3
PCDHGB4-201ENST00000519479 MAP3K12Q12852 859 aa13.17□□□□□ -0.3
PCDHGB4-201ENST00000519479 UVSSAQ2YD98 709 aa13.17□□□□□ -0.3
PCDHGB4-201ENST00000519479 NDUFB9Q9Y6M9 179 aa13.17□□□□□ -0.3
PCDHGB4-201ENST00000519479 KDRP35968 1356 aa13.17□□□□□ -0.3
PCDHGB4-201ENST00000519479 CCAR2Q8N163 923 aaKnown RBP13.17□□□□□ -0.3
PCDHGB4-201ENST00000519479 CHAMP1Q96JM3 812 aa13.17□□□□□ -0.3
PCDHGB4-201ENST00000519479 KAT6BQ8WYB5 2073 aa13.17□□□□□ -0.3
PCDHGB4-201ENST00000519479 TNS3Q68CZ2 1445 aa13.17□□□□□ -0.3
PCDHGB4-201ENST00000519479 PRAMEF22A3QJZ6 481 aa13.17□□□□□ -0.3
PCDHGB4-201ENST00000519479 EPB41L2O43491 1005 aaKnown RBP13.17□□□□□ -0.3
PCDHGB4-201ENST00000519479 ATP2B3Q16720 1220 aa13.17□□□□□ -0.3
PCDHGB4-201ENST00000519479 CCDC129Q6ZRS4 1044 aa13.17□□□□□ -0.3
PCDHGB4-201ENST00000519479 A1BGP04217 495 aa13.17□□□□□ -0.3
PCDHGB4-201ENST00000519479 PDILTQ8N807 584 aa13.17□□□□□ -0.3
PCDHGB4-201ENST00000519479 ZSCAN16Q9H4T2 348 aaPredicted RBP13.17□□□□□ -0.3
PCDHGB4-201ENST00000519479 ORC3Q9UBD5 711 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms