RNA–Protein interactions for RNA: ENST00000518040.5

SH2D4A-202, Transcript of SH2 domain containing 4A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SH2D4A, Length 1,697 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4A-202ENST00000518040 RTFDC1Q9BY42 306 aaPredicted RBP13.18□□□□□ -0.3
SH2D4A-202ENST00000518040 RNF186Q9NXI6 227 aa13.18□□□□□ -0.3
SH2D4A-202ENST00000518040 ATP6V0A2Q9Y487 856 aa13.18□□□□□ -0.3
SH2D4A-202ENST00000518040 FAM155AB1AL88 458 aaPredicted RBP13.18□□□□□ -0.3
SH2D4A-202ENST00000518040 U2SURPO15042 1029 aaKnown RBP13.18□□□□□ -0.3
SH2D4A-202ENST00000518040 TRPA1O75762 1119 aa13.18□□□□□ -0.3
SH2D4A-202ENST00000518040 KIF23Q02241 960 aaPredicted RBP13.18□□□□□ -0.3
SH2D4A-202ENST00000518040 GBA2Q9HCG7 927 aaPredicted RBP13.18□□□□□ -0.3
SH2D4A-202ENST00000518040 PRAMEF22A3QJZ6 481 aa13.17□□□□□ -0.3
SH2D4A-202ENST00000518040 PRR29P0C7W0 189 aa13.17□□□□□ -0.3
SH2D4A-202ENST00000518040 HIRAP54198 1017 aaPredicted RBP13.17□□□□□ -0.3
SH2D4A-202ENST00000518040 USP48Q86UV5 1035 aa13.17□□□□□ -0.3
SH2D4A-202ENST00000518040 RTF1Q92541 710 aaKnown RBP13.17□□□□□ -0.3
SH2D4A-202ENST00000518040 CNOT7Q9UIV1 285 aaKnown RBP13.17□□□□□ -0.3
SH2D4A-202ENST00000518040 ZNF157P51786 506 aaPredicted RBP13.16□□□□□ -0.3
SH2D4A-202ENST00000518040 KIAA2012Q0VF49 1180 aa13.16□□□□□ -0.3
SH2D4A-202ENST00000518040 KIF6Q6ZMV9 814 aa13.16□□□□□ -0.3
SH2D4A-202ENST00000518040 NLRP3Q96P20 1036 aa13.16□□□□□ -0.3
SH2D4A-202ENST00000518040 AKAP11Q9UKA4 1901 aa13.16□□□□□ -0.3
SH2D4A-202ENST00000518040 MAP3K15Q6ZN16 1313 aa13.16□□□□□ -0.3
SH2D4A-202ENST00000518040 TCERG1O14776 1098 aaKnown RBP13.15□□□□□ -0.3
SH2D4A-202ENST00000518040 HSPA5P11021 654 aaKnown RBP13.15□□□□□ -0.3
SH2D4A-202ENST00000518040 DPP8Q6V1X1 898 aaPredicted RBP13.15□□□□□ -0.3
SH2D4A-202ENST00000518040 TRPM4Q8TD43 1214 aa13.15□□□□□ -0.3
SH2D4A-202ENST00000518040 DPF2Q92785 391 aa13.15□□□□□ -0.3
SH2D4A-202ENST00000518040 HPS5Q9UPZ3 1129 aa13.15□□□□□ -0.3
SH2D4A-202ENST00000518040 BBOX1O75936 387 aa13.15□□□□□ -0.31
SH2D4A-202ENST00000518040 KRT26Q7Z3Y9 468 aa13.15□□□□□ -0.31
SH2D4A-202ENST00000518040 PPP1R42Q7Z4L9 355 aa13.15□□□□□ -0.31
SH2D4A-202ENST00000518040 RAD17O75943 681 aa13.14□□□□□ -0.31
SH2D4A-202ENST00000518040 SP8Q8IXZ3 490 aa13.14□□□□□ -0.31
SH2D4A-202ENST00000518040 MPNDQ8N594 471 aa13.14□□□□□ -0.31
SH2D4A-202ENST00000518040 DCPSQ96C86 337 aaKnown RBP13.14□□□□□ -0.31
SH2D4A-202ENST00000518040 HTATSF1O43719 755 aaKnown RBP13.13□□□□□ -0.31
SH2D4A-202ENST00000518040 SLC10A3P09131 477 aa13.13□□□□□ -0.31
SH2D4A-202ENST00000518040 PARP10Q53GL7 1025 aa13.13□□□□□ -0.31
SH2D4A-202ENST00000518040 MICALL2Q8IY33 904 aa13.13□□□□□ -0.31
SH2D4A-202ENST00000518040 CSRNP1Q96S65 589 aa13.13□□□□□ -0.31
SH2D4A-202ENST00000518040 NUP98P52948 1817 aa13.13□□□□□ -0.31
SH2D4A-202ENST00000518040 COL3A1P02461 1466 aaPredicted RBP13.13□□□□□ -0.31
SH2D4A-202ENST00000518040 EVX2Q03828 476 aa13.12□□□□□ -0.31
SH2D4A-202ENST00000518040 SUSD4Q5VX71 490 aa13.12□□□□□ -0.31
SH2D4A-202ENST00000518040 ZNF34Q8IZ26 560 aa13.12□□□□□ -0.31
SH2D4A-202ENST00000518040 HDAC9Q9UKV0 1011 aa13.12□□□□□ -0.31
SH2D4A-202ENST00000518040 UBN2Q6ZU65 1347 aa13.12□□□□□ -0.31
SH2D4A-202ENST00000518040 NTSR2O95665 410 aa13.12□□□□□ -0.31
SH2D4A-202ENST00000518040 GPTP24298 496 aa13.12□□□□□ -0.31
SH2D4A-202ENST00000518040 RPS12P25398 132 aaKnown RBP13.12□□□□□ -0.31
SH2D4A-202ENST00000518040 PRKAR2BP31323 418 aa13.12□□□□□ -0.31
SH2D4A-202ENST00000518040 SLC10A5Q5PT55 438 aa13.12□□□□□ -0.31
SH2D4A-202ENST00000518040 TMC4Q7Z404 712 aa13.12□□□□□ -0.31
SH2D4A-202ENST00000518040 LAMB4A4D0S4 1761 aa13.11□□□□□ -0.31
SH2D4A-202ENST00000518040 TAF7Q15545 349 aaPredicted RBP13.11□□□□□ -0.31
SH2D4A-202ENST00000518040 HABP4Q5JVS0 413 aaKnown RBP13.11□□□□□ -0.31
SH2D4A-202ENST00000518040 NGEFQ8N5V2 710 aa13.11□□□□□ -0.31
SH2D4A-202ENST00000518040 PHACTR3Q96KR7 559 aa13.11□□□□□ -0.31
SH2D4A-202ENST00000518040 ABCC4O15439 1325 aa13.1□□□□□ -0.31
SH2D4A-202ENST00000518040 FKBP1BP68106 108 aa13.1□□□□□ -0.31
SH2D4A-202ENST00000518040 NOM1Q5C9Z4 860 aaKnown RBP13.1□□□□□ -0.31
SH2D4A-202ENST00000518040 GIGYF2Q6Y7W6 1299 aaKnown RBP13.1□□□□□ -0.31
SH2D4A-202ENST00000518040 RSPH6AQ9H0K4 717 aa13.1□□□□□ -0.31
SH2D4A-202ENST00000518040 CC2D1BQ5T0F9 858 aaKnown RBP13.09□□□□□ -0.31
SH2D4A-202ENST00000518040 MCM10Q7L590 875 aa13.09□□□□□ -0.31
SH2D4A-202ENST00000518040 SAMD7Q7Z3H4 446 aa13.09□□□□□ -0.31
SH2D4A-202ENST00000518040 SULF1Q8IWU6 871 aa13.09□□□□□ -0.31
SH2D4A-202ENST00000518040 PNISRQ8TF01 805 aaKnown RBP13.09□□□□□ -0.31
SH2D4A-202ENST00000518040 CFAP53Q96M91 514 aa13.09□□□□□ -0.31
SH2D4A-202ENST00000518040 NUDCQ9Y266 331 aa13.09□□□□□ -0.31
SH2D4A-202ENST00000518040 CLSPNQ9HAW4 1339 aa13.09□□□□□ -0.31
SH2D4A-202ENST00000518040 YDJCA8MPS7 323 aa13.08□□□□□ -0.31
SH2D4A-202ENST00000518040 FBXO46Q6PJ61 603 aaPredicted RBP13.08□□□□□ -0.31
SH2D4A-202ENST00000518040 TTLL7Q6ZT98 887 aa13.08□□□□□ -0.31
SH2D4A-202ENST00000518040 C3orf67Q6ZVT6 689 aa13.08□□□□□ -0.31
SH2D4A-202ENST00000518040 UTP14AQ9BVJ6 771 aaKnown RBP13.08□□□□□ -0.31
SH2D4A-202ENST00000518040 ZBTB3Q9H5J0 574 aa13.08□□□□□ -0.31
SH2D4A-202ENST00000518040 RRP7AQ9Y3A4 280 aaKnown RBP13.08□□□□□ -0.31
SH2D4A-202ENST00000518040 PER1O15534 1290 aaPredicted RBP13.08□□□□□ -0.32
SH2D4A-202ENST00000518040 TBC1D10BQ4KMP7 808 aaPredicted RBP13.08□□□□□ -0.32
SH2D4A-202ENST00000518040 DDX46Q7L014 1031 aaKnown RBP13.08□□□□□ -0.32
SH2D4A-202ENST00000518040 SLC51AQ86UW1 340 aa13.08□□□□□ -0.32
SH2D4A-202ENST00000518040 ERBB4Q15303 1308 aa13.07□□□□□ -0.32
SH2D4A-202ENST00000518040 SHTN1A0MZ66 631 aa13.07□□□□□ -0.32
SH2D4A-202ENST00000518040 C19orf67A6NJJ6 358 aa13.07□□□□□ -0.32
SH2D4A-202ENST00000518040 ADM5C9JUS6 153 aa13.07□□□□□ -0.32
SH2D4A-202ENST00000518040 PSMD14O00487 310 aa13.07□□□□□ -0.32
SH2D4A-202ENST00000518040 ZNF296Q8WUU4 475 aaPredicted RBP13.07□□□□□ -0.32
SH2D4A-202ENST00000518040 GRAPQ13588 217 aa13.06□□□□□ -0.32
SH2D4A-202ENST00000518040 WASHC4Q2M389 1173 aa13.06□□□□□ -0.32
SH2D4A-202ENST00000518040 DLK2Q6UY11 383 aa13.06□□□□□ -0.32
SH2D4A-202ENST00000518040 RASAL3Q86YV0 1011 aa13.06□□□□□ -0.32
SH2D4A-202ENST00000518040 GRAPLQ8TC17 118 aaPredicted RBP13.06□□□□□ -0.32
SH2D4A-202ENST00000518040 SPDYE4A6NLX3 237 aa13.05□□□□□ -0.32
SH2D4A-202ENST00000518040 MYL6BP14649 208 aa13.05□□□□□ -0.32
SH2D4A-202ENST00000518040 KIF4BQ2VIQ3 1234 aa13.05□□□□□ -0.32
SH2D4A-202ENST00000518040 HSP90AB3PQ58FF7 597 aa13.05□□□□□ -0.32
SH2D4A-202ENST00000518040 RBM26Q5T8P6 1007 aaKnown RBP13.05□□□□□ -0.32
SH2D4A-202ENST00000518040 INTS3Q68E01 1043 aaKnown RBP13.05□□□□□ -0.32
SH2D4A-202ENST00000518040 CDCA5Q96FF9 252 aa13.05□□□□□ -0.32
SH2D4A-202ENST00000518040 POLR2AP24928 1970 aaKnown RBP13.05□□□□□ -0.32
SH2D4A-202ENST00000518040 ANKRD36CQ5JPF3 1778 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms