RNA–Protein interactions for RNA: ENST00000515939.1

RNU4ATAC11P-201, Transcript of RNA, U4atac small nuclear 11, pseudogene, humanhuman

BASIC

Gene RNU4ATAC11P, Length 126 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4ATAC11P-201ENST00000515939 DLL1O00548 723 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 TCERG1O14776 1098 aaKnown RBP1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 RAD17O75943 681 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 NTSR2O95665 410 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 SLC10A3P09131 477 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 NPR1P16066 1061 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 CTGFP29279 349 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 PDE6BP35913 854 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 GJA5P36382 358 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 TM4SF4P48230 202 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 HUNKP57058 714 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 DCTN1Q14203 1278 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 PROSER3Q2NL68 480 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 SLC10A5Q5PT55 438 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 RGMBQ6NW40 437 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 USP50Q70EL3 339 aaPredicted RBP1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 CTU1Q7Z7A3 348 aaKnown RBP1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 UBE2Q1Q7Z7E8 422 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 DZIP3Q86Y13 1208 aaKnown RBP1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 RASAL3Q86YV0 1011 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 ZNF34Q8IZ26 560 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 CNBD1Q8NA66 436 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 CNKSR1Q969H4 720 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 SHISA4Q96DD7 197 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 CFAP44Q96MT7 982 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 SETDB2Q96T68 719 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 PTPN18Q99952 460 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 MXD3Q9BW11 206 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 PANK3Q9H999 370 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 ADARB2Q9NS39 739 aaKnown RBP1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 MIS18AQ9NYP9 233 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 POLLQ9UGP5 575 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 RAPGEFL1Q9UHV5 662 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 CNOT7Q9UIV1 285 aaKnown RBP1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 PCDHAC2Q9Y5I4 1007 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 GBF1Q92538 1859 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 ZNF318Q5VUA4 2279 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 RIF1Q5UIP0 2472 aaKnown RBP1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 DCHS1Q96JQ0 3298 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 XIRP2A4UGR9 3374 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 FRMPD3Q5JV73 1810 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 ABCC4O15439 1325 aa1.66□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 CACNA1HO95180 2353 aa1.65□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 ZDBF2Q9HCK1 2354 aa1.65□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 USP34Q70CQ2 3546 aa1.65□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 CDK5RAP2Q96SN8 1893 aa1.65□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 MYO5AQ9Y4I1 1855 aaKnown RBP1.65□□□□□ -2.14
RNU4ATAC11P-201ENST00000515939 CACNA1AO00555 2505 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 PRRC2BQ5JSZ5 2229 aaKnown RBP1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 UBE2Q2LH0YL09 131 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 RBAK-RBAKDNI3L0D1 243 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 GPR25O00155 361 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 IGF2BP3O00425 579 aaKnown RBP eCLIP1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 PSMD14O00487 310 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 ANXA1P04083 346 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 HSP90AB1P08238 724 aaKnown RBP1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 HCLS1P14317 486 aaPredicted RBP1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 GPTP24298 496 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 ECE1P42892 770 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 MNX1P50219 401 aaPredicted RBP1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 PTPN12Q05209 780 aaKnown RBP1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 KIAA2012Q0VF49 1180 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 NOGQ13253 232 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 TBC1D10BQ4KMP7 808 aaPredicted RBP1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 AMOTQ4VCS5 1084 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 CLEC4GQ6UXB4 293 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 OTOP1Q7RTM1 612 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 PNMA8AQ86V59 439 aaPredicted RBP1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 TXNRD3Q86VQ6 643 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 CDAN1Q8IWY9 1227 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 RTKN2Q8IZC4 609 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 LARGE2Q8N3Y3 721 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 ZC3H15Q8WU90 426 aaKnown RBP1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 CELF1Q92879 486 aaKnown RBP1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 ARMC5Q96C12 935 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 CDCA5Q96FF9 252 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 LRCH3Q96II8 777 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 ZBED3Q96IU2 234 aaPredicted RBP1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 CLMNQ96JQ2 1002 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 CRAMP1Q96RY5 1269 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 THUMPD2Q9BTF0 503 aaKnown RBP1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 CFHR5Q9BXR6 569 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 COL25A1Q9BXS0 654 aaPredicted RBP1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 RSPH6AQ9H0K4 717 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 ZNF408Q9H9D4 720 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 GBA2Q9HCG7 927 aaPredicted RBP1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 SAGE1Q9NXZ1 904 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 RBM27Q9P2N5 1060 aaKnown RBP1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 ZNRF3Q9ULT6 936 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 PDZRN3Q9UPQ7 1066 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 NIP7Q9Y221 180 aaKnown RBP eCLIP1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 ATP6V0A2Q9Y487 856 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 ARAP2Q8WZ64 1704 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 TPRP12270 2363 aaKnown RBP1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 VPS13AQ96RL7 3174 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 KIF7Q2M1P5 1343 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 IRS2Q9Y4H2 1338 aa1.65□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 SPTBN2O15020 2390 aa1.64□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 CACNA1GO43497 2377 aa1.64□□□□□ -2.15
RNU4ATAC11P-201ENST00000515939 RLFQ13129 1914 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms