RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 HDGFL1Q5TGJ6 251 aa8.84□□□□□ -0.99
PDLIM5-219ENST00000514743 ACRBPQ8NEB7 543 aa8.84□□□□□ -0.99
PDLIM5-219ENST00000514743 NOL7Q9UMY1 257 aaKnown RBP8.84□□□□□ -0.99
PDLIM5-219ENST00000514743 LRRFIP2Q9Y608 721 aaKnown RBP8.84□□□□□ -0.99
PDLIM5-219ENST00000514743 HEG1Q9ULI3 1381 aa8.84□□□□□ -0.99
PDLIM5-219ENST00000514743 GCP02774 474 aa8.84□□□□□ -0.99
PDLIM5-219ENST00000514743 HSP90AB1P08238 724 aaKnown RBP8.84□□□□□ -0.99
PDLIM5-219ENST00000514743 GNAI3P08754 354 aa8.84□□□□□ -0.99
PDLIM5-219ENST00000514743 NASPP49321 788 aaPredicted RBP8.84□□□□□ -0.99
PDLIM5-219ENST00000514743 RAB3GAP1Q15042 981 aa8.84□□□□□ -0.99
PDLIM5-219ENST00000514743 DEF6Q9H4E7 631 aa8.84□□□□□ -0.99
PDLIM5-219ENST00000514743 PKD1L3Q7Z443 1732 aa8.84□□□□□ -0.99
PDLIM5-219ENST00000514743 FAM177BA6PVY3 158 aa8.84□□□□□ -0.99
PDLIM5-219ENST00000514743 CAND2O75155 1236 aa8.84□□□□□ -0.99
PDLIM5-219ENST00000514743 COQ9O75208 318 aa8.84□□□□□ -0.99
PDLIM5-219ENST00000514743 CASQ1P31415 396 aa8.84□□□□□ -0.99
PDLIM5-219ENST00000514743 HMGN5P82970 282 aaKnown RBP8.84□□□□□ -0.99
PDLIM5-219ENST00000514743 AKAP4Q5JQC9 854 aa8.84□□□□□ -0.99
PDLIM5-219ENST00000514743 MFSD4BQ5TF39 518 aa8.84□□□□□ -0.99
PDLIM5-219ENST00000514743 TSHZ3Q63HK5 1081 aa8.84□□□□□ -0.99
PDLIM5-219ENST00000514743 FAM184AQ8NB25 1140 aa8.84□□□□□ -0.99
PDLIM5-219ENST00000514743 IRAK4Q9NWZ3 460 aa8.84□□□□□ -0.99
PDLIM5-219ENST00000514743 AXIN2Q9Y2T1 843 aa8.84□□□□□ -0.99
PDLIM5-219ENST00000514743 JRKLQ9Y4A0 524 aa8.84□□□□□ -0.99
PDLIM5-219ENST00000514743 ADCY9O60503 1353 aa8.83□□□□□ -1
PDLIM5-219ENST00000514743 BRD1O95696 1058 aa8.83□□□□□ -1
PDLIM5-219ENST00000514743 HOXB7P09629 217 aa8.83□□□□□ -1
PDLIM5-219ENST00000514743 KCTD17Q8N5Z5 321 aa8.83□□□□□ -1
PDLIM5-219ENST00000514743 ANAPC4Q9UJX5 808 aa8.83□□□□□ -1
PDLIM5-219ENST00000514743 SMC3Q9UQE7 1217 aa8.83□□□□□ -1
PDLIM5-219ENST00000514743 GLI3P10071 1580 aa8.83□□□□□ -1
PDLIM5-219ENST00000514743 HS1BP3Q53T59 392 aa8.83□□□□□ -1
PDLIM5-219ENST00000514743 GOLGA6L1Q8N7Z2 621 aa8.83□□□□□ -1
PDLIM5-219ENST00000514743 LMOD2Q6P5Q4 547 aa8.82□□□□□ -1
PDLIM5-219ENST00000514743 SSH3Q8TE77 659 aa8.82□□□□□ -1
PDLIM5-219ENST00000514743 LRRCC1Q9C099 1032 aa8.82□□□□□ -1
PDLIM5-219ENST00000514743 CHPF2Q9P2E5 772 aa8.82□□□□□ -1
PDLIM5-219ENST00000514743 ABCC6O95255 1503 aa8.82□□□□□ -1
PDLIM5-219ENST00000514743 TPD52L2O43399 206 aaKnown RBP8.82□□□□□ -1
PDLIM5-219ENST00000514743 POLA2Q14181 598 aa8.82□□□□□ -1
PDLIM5-219ENST00000514743 GET4Q7L5D6 327 aaPredicted RBP8.82□□□□□ -1
PDLIM5-219ENST00000514743 CREBRFQ8IUR6 639 aa8.82□□□□□ -1
PDLIM5-219ENST00000514743 PRIMPOLQ96LW4 560 aa8.82□□□□□ -1
PDLIM5-219ENST00000514743 SSFA2P28290 1259 aa8.82□□□□□ -1
PDLIM5-219ENST00000514743 ATP6V1AP38606 617 aa8.82□□□□□ -1
PDLIM5-219ENST00000514743 RABEP1Q15276 862 aa8.82□□□□□ -1
PDLIM5-219ENST00000514743 MAP9Q49MG5 647 aa8.82□□□□□ -1
PDLIM5-219ENST00000514743 BEND3Q5T5X7 828 aa8.82□□□□□ -1
PDLIM5-219ENST00000514743 ZNF530Q6P9A1 599 aaPredicted RBP8.82□□□□□ -1
PDLIM5-219ENST00000514743 MPRIPQ6WCQ1 1025 aa8.82□□□□□ -1
PDLIM5-219ENST00000514743 C10orf67Q8IYJ2 551 aa8.82□□□□□ -1
PDLIM5-219ENST00000514743 BCL2L12Q9HB09 334 aa8.82□□□□□ -1
PDLIM5-219ENST00000514743 RNMTO43148 476 aaKnown RBP8.81□□□□□ -1
PDLIM5-219ENST00000514743 MX1P20591 662 aa8.81□□□□□ -1
PDLIM5-219ENST00000514743 HNRNPH2P55795 449 aaKnown RBP8.81□□□□□ -1
PDLIM5-219ENST00000514743 PRPF38AQ8NAV1 312 aaKnown RBP8.81□□□□□ -1
PDLIM5-219ENST00000514743 ANKRD24Q8TF21 1146 aa8.81□□□□□ -1
PDLIM5-219ENST00000514743 STAP2Q9UGK3 403 aa8.81□□□□□ -1
PDLIM5-219ENST00000514743 NBPF7P0C2Y1 421 aaPredicted RBP8.81□□□□□ -1
PDLIM5-219ENST00000514743 NAP1L1P55209 391 aaKnown RBP8.81□□□□□ -1
PDLIM5-219ENST00000514743 C11orf91Q3C1V1 193 aa8.81□□□□□ -1
PDLIM5-219ENST00000514743 PARP4Q9UKK3 1724 aaKnown RBP8.81□□□□□ -1
PDLIM5-219ENST00000514743 BTBD11A6QL63 1104 aa8.81□□□□□ -1
PDLIM5-219ENST00000514743 EIF2S2P20042 333 aaKnown RBP8.81□□□□□ -1
PDLIM5-219ENST00000514743 ZKSCAN5Q9Y2L8 839 aa8.81□□□□□ -1
PDLIM5-219ENST00000514743 LAMB4A4D0S4 1761 aa8.81□□□□□ -1
PDLIM5-219ENST00000514743 GOLGA6L22H0YM25 854 aa8.8□□□□□ -1
PDLIM5-219ENST00000514743 ERC2O15083 957 aa8.8□□□□□ -1
PDLIM5-219ENST00000514743 ANXA1P04083 346 aa8.8□□□□□ -1
PDLIM5-219ENST00000514743 UBTFL1P0CB47 393 aaPredicted RBP8.8□□□□□ -1
PDLIM5-219ENST00000514743 PLEKHO1Q53GL0 409 aaPredicted RBP8.8□□□□□ -1
PDLIM5-219ENST00000514743 SWT1Q5T5J6 900 aaKnown RBP8.8□□□□□ -1
PDLIM5-219ENST00000514743 GAS2L3Q86XJ1 694 aa8.8□□□□□ -1
PDLIM5-219ENST00000514743 UNC5CLQ8IV45 518 aa8.8□□□□□ -1
PDLIM5-219ENST00000514743 RIPOR2Q9Y4F9 1068 aa8.8□□□□□ -1
PDLIM5-219ENST00000514743 PAXBP1Q9Y5B6 917 aa8.8□□□□□ -1
PDLIM5-219ENST00000514743 AFDNP55196 1824 aaKnown RBP8.8□□□□□ -1
PDLIM5-219ENST00000514743 KDM6AO15550 1401 aaPredicted RBP8.8□□□□□ -1
PDLIM5-219ENST00000514743 ERBB3P21860 1342 aa8.8□□□□□ -1
PDLIM5-219ENST00000514743 PRAMEF22A3QJZ6 481 aa8.8□□□□□ -1
PDLIM5-219ENST00000514743 PAX3P23760 479 aa8.8□□□□□ -1
PDLIM5-219ENST00000514743 AMOTQ4VCS5 1084 aa8.8□□□□□ -1
PDLIM5-219ENST00000514743 SRCIN1Q9C0H9 1055 aa8.8□□□□□ -1
PDLIM5-219ENST00000514743 MRC1P22897 1456 aa8.8□□□□□ -1
PDLIM5-219ENST00000514743 MEGF6O75095 1541 aa8.8□□□□□ -1
PDLIM5-219ENST00000514743 ARFGEF2Q9Y6D5 1785 aa8.79□□□□□ -1
PDLIM5-219ENST00000514743 PI4KAP2A4QPH2 592 aa8.79□□□□□ -1
PDLIM5-219ENST00000514743 DDX11L8A8MPP1 907 aa8.79□□□□□ -1
PDLIM5-219ENST00000514743 ABCD1P33897 745 aa8.79□□□□□ -1
PDLIM5-219ENST00000514743 GTF2F1P35269 517 aaKnown RBP eCLIP8.79□□□□□ -1
PDLIM5-219ENST00000514743 PROSER3Q2NL68 480 aa8.79□□□□□ -1
PDLIM5-219ENST00000514743 CLEC17AQ6ZS10 378 aa8.79□□□□□ -1
PDLIM5-219ENST00000514743 KRT28Q7Z3Y7 464 aa8.79□□□□□ -1
PDLIM5-219ENST00000514743 PPP1R42Q7Z4L9 355 aa8.79□□□□□ -1
PDLIM5-219ENST00000514743 PI4KAP1Q8N8J0 262 aa8.79□□□□□ -1
PDLIM5-219ENST00000514743 IL25Q9H293 177 aa8.79□□□□□ -1
PDLIM5-219ENST00000514743 CYP2E1P05181 493 aaPredicted RBP8.79□□□□□ -1
PDLIM5-219ENST00000514743 MCM5P33992 734 aa8.79□□□□□ -1
PDLIM5-219ENST00000514743 TTC19Q6DKK2 380 aaPredicted RBP8.79□□□□□ -1
PDLIM5-219ENST00000514743 DNAAF4Q8WXU2 420 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms