RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 COL18A1P39060 1754 aa14.99□□□□□ -0.01
SDHA-216ENST00000514027 VGLL3A8MV65 326 aa14.99□□□□□ -0.01
SDHA-216ENST00000514027 GJB2P29033 226 aa14.99□□□□□ -0.01
SDHA-216ENST00000514027 NECTIN1Q15223 517 aa14.99□□□□□ -0.01
SDHA-216ENST00000514027 EDC3Q96F86 508 aaKnown RBP14.99□□□□□ -0.01
SDHA-216ENST00000514027 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.99□□□□□ -0.01
SDHA-216ENST00000514027 ZSWIM6Q9HCJ5 1215 aa14.98□□□□□ -0.01
SDHA-216ENST00000514027 CSPP1Q1MSJ5 1256 aa14.98□□□□□ -0.01
SDHA-216ENST00000514027 TAF3Q5VWG9 929 aa14.98□□□□□ -0.01
SDHA-216ENST00000514027 STRCP1A6NGW2 1772 aa14.97□□□□□ -0.01
SDHA-216ENST00000514027 A0A087WZG4 1122 aa14.97□□□□□ -0.01
SDHA-216ENST00000514027 FIBPO43427 364 aa14.97□□□□□ -0.01
SDHA-216ENST00000514027 F13A1P00488 732 aa14.97□□□□□ -0.01
SDHA-216ENST00000514027 TFCP2Q12800 502 aa14.97□□□□□ -0.01
SDHA-216ENST00000514027 NECAB1Q8N987 351 aa14.97□□□□□ -0.01
SDHA-216ENST00000514027 TCEANC2Q96MN5 208 aa14.97□□□□□ -0.01
SDHA-216ENST00000514027 CHMP3Q9Y3E7 222 aa14.97□□□□□ -0.01
SDHA-216ENST00000514027 CCDC9Q9Y3X0 531 aaKnown RBP14.97□□□□□ -0.01
SDHA-216ENST00000514027 NDUFB9Q9Y6M9 179 aa14.97□□□□□ -0.01
SDHA-216ENST00000514027 MRC1P22897 1456 aa14.97□□□□□ -0.01
SDHA-216ENST00000514027 SLC27A2O14975 620 aa14.97□□□□□ -0.01
SDHA-216ENST00000514027 LRP10Q7Z4F1 713 aa14.97□□□□□ -0.01
SDHA-216ENST00000514027 MAP4K1Q92918 833 aa14.97□□□□□ -0.01
SDHA-216ENST00000514027 TM6SF1Q9BZW5 370 aa14.97□□□□□ -0.01
SDHA-216ENST00000514027 TSPY26PQ9H489 355 aa14.97□□□□□ -0.01
SDHA-216ENST00000514027 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.97□□□□□ -0.01
SDHA-216ENST00000514027 ARFGEF2Q9Y6D5 1785 aa14.97□□□□□ -0.01
SDHA-216ENST00000514027 VPS37CA5D8V6 355 aaPredicted RBP14.96□□□□□ -0.01
SDHA-216ENST00000514027 ME3Q16798 604 aa14.96□□□□□ -0.01
SDHA-216ENST00000514027 ZNF589Q86UQ0 364 aaPredicted RBP14.96□□□□□ -0.01
SDHA-216ENST00000514027 CADPS2Q86UW7 1296 aa14.96□□□□□ -0.01
SDHA-216ENST00000514027 ZSCAN31Q96LW9 406 aaPredicted RBP14.96□□□□□ -0.01
SDHA-216ENST00000514027 DNAJC2Q99543 621 aaKnown RBP14.96□□□□□ -0.01
SDHA-216ENST00000514027 SH2B1Q9NRF2 756 aaPredicted RBP14.96□□□□□ -0.01
SDHA-216ENST00000514027 KDM4FA0A1W2PPD8 638 aa14.96□□□□□ -0.02
SDHA-216ENST00000514027 PHF14O94880 888 aa14.96□□□□□ -0.02
SDHA-216ENST00000514027 PTPN12Q05209 780 aaKnown RBP14.96□□□□□ -0.02
SDHA-216ENST00000514027 TNNI3KQ59H18 835 aa14.96□□□□□ -0.02
SDHA-216ENST00000514027 RNF20Q5VTR2 975 aa14.96□□□□□ -0.02
SDHA-216ENST00000514027 DBNLQ9UJU6 430 aaKnown RBP14.96□□□□□ -0.02
SDHA-216ENST00000514027 FPGT-TNNI3KV9GXZ4 949 aa14.96□□□□□ -0.02
SDHA-216ENST00000514027 PKD1L3Q7Z443 1732 aa14.95□□□□□ -0.02
SDHA-216ENST00000514027 COL9A3Q14050 684 aaPredicted RBP14.95□□□□□ -0.02
SDHA-216ENST00000514027 PLCD3Q8N3E9 789 aa14.95□□□□□ -0.02
SDHA-216ENST00000514027 KCNB2Q92953 911 aa14.95□□□□□ -0.02
SDHA-216ENST00000514027 COPRSQ9NQ92 184 aa14.95□□□□□ -0.02
SDHA-216ENST00000514027 TPCN1Q9ULQ1 816 aa14.95□□□□□ -0.02
SDHA-216ENST00000514027 ATP6V1DQ9Y5K8 247 aa14.95□□□□□ -0.02
SDHA-216ENST00000514027 DCCP43146 1447 aa14.95□□□□□ -0.02
SDHA-216ENST00000514027 PSMA5P28066 241 aa14.94□□□□□ -0.02
SDHA-216ENST00000514027 BLOC1S2Q6QNY1 142 aa14.94□□□□□ -0.02
SDHA-216ENST00000514027 TAF6LQ9Y6J9 622 aa14.94□□□□□ -0.02
SDHA-216ENST00000514027 MED23Q9ULK4 1368 aa14.94□□□□□ -0.02
SDHA-216ENST00000514027 RFX5P48382 616 aaPredicted RBP14.94□□□□□ -0.02
SDHA-216ENST00000514027 ST3GAL1Q11201 340 aa14.94□□□□□ -0.02
SDHA-216ENST00000514027 SPATA31A3Q5VYP0 1347 aa14.94□□□□□ -0.02
SDHA-216ENST00000514027 ABCC6O95255 1503 aa14.93□□□□□ -0.02
SDHA-216ENST00000514027 HSPA2P54652 639 aa14.93□□□□□ -0.02
SDHA-216ENST00000514027 PLBD2Q8NHP8 589 aa14.93□□□□□ -0.02
SDHA-216ENST00000514027 DBNDD2Q9BQY9 259 aa14.93□□□□□ -0.02
SDHA-216ENST00000514027 CBX1P83916 185 aa14.93□□□□□ -0.02
SDHA-216ENST00000514027 DNM1Q05193 864 aaKnown RBP14.93□□□□□ -0.02
SDHA-216ENST00000514027 LMBR1LQ6UX01 489 aa14.93□□□□□ -0.02
SDHA-216ENST00000514027 TOM1L2Q6ZVM7 507 aa14.93□□□□□ -0.02
SDHA-216ENST00000514027 TMEM87AQ8NBN3 555 aa14.93□□□□□ -0.02
SDHA-216ENST00000514027 MTMR6Q9Y217 621 aa14.93□□□□□ -0.02
SDHA-216ENST00000514027 LAMB4A4D0S4 1761 aa14.93□□□□□ -0.02
SDHA-216ENST00000514027 CHGBP05060 677 aa14.92□□□□□ -0.02
SDHA-216ENST00000514027 ATP5JP18859 108 aa14.92□□□□□ -0.02
SDHA-216ENST00000514027 STK3Q13188 491 aa14.92□□□□□ -0.02
SDHA-216ENST00000514027 PDLIM2Q96JY6 352 aa14.92□□□□□ -0.02
SDHA-216ENST00000514027 PRDM11Q9NQV5 511 aa14.92□□□□□ -0.02
SDHA-216ENST00000514027 ZKSCAN5Q9Y2L8 839 aa14.92□□□□□ -0.02
SDHA-216ENST00000514027 CDK11BP21127 795 aaKnown RBP14.92□□□□□ -0.02
SDHA-216ENST00000514027 UBE2HP62256 183 aa14.92□□□□□ -0.02
SDHA-216ENST00000514027 RABL6Q3YEC7 729 aaPredicted RBP14.92□□□□□ -0.02
SDHA-216ENST00000514027 CCDC183Q5T5S1 534 aa14.92□□□□□ -0.02
SDHA-216ENST00000514027 CCDC129Q6ZRS4 1044 aa14.92□□□□□ -0.02
SDHA-216ENST00000514027 DDX46Q7L014 1031 aaKnown RBP14.92□□□□□ -0.02
SDHA-216ENST00000514027 RPS6KB1P23443 525 aa14.91□□□□□ -0.02
SDHA-216ENST00000514027 MCM5P33992 734 aa14.91□□□□□ -0.02
SDHA-216ENST00000514027 SNRKQ9NRH2 765 aa14.91□□□□□ -0.02
SDHA-216ENST00000514027 NBPF26B4DH59 902 aa14.9□□□□□ -0.02
SDHA-216ENST00000514027 GLI3P10071 1580 aa14.9□□□□□ -0.02
SDHA-216ENST00000514027 NBPF14Q5TI25 921 aa14.9□□□□□ -0.02
SDHA-216ENST00000514027 LARP1BQ659C4 914 aaKnown RBP14.9□□□□□ -0.02
SDHA-216ENST00000514027 NBPF10Q6P3W6 841 aaKnown RBP14.9□□□□□ -0.02
SDHA-216ENST00000514027 TTLL7Q6ZT98 887 aa14.9□□□□□ -0.02
SDHA-216ENST00000514027 STRCQ7RTU9 1775 aa14.9□□□□□ -0.02
SDHA-216ENST00000514027 FERMT3Q86UX7 667 aa14.9□□□□□ -0.02
SDHA-216ENST00000514027 NBPF15Q8N660 670 aa14.9□□□□□ -0.02
SDHA-216ENST00000514027 NEUROD6Q96NK8 337 aa14.9□□□□□ -0.02
SDHA-216ENST00000514027 PCDH11XQ9BZA7 1347 aa14.9□□□□□ -0.02
SDHA-216ENST00000514027 PCDH11YQ9BZA8 1340 aa14.9□□□□□ -0.02
SDHA-216ENST00000514027 ZBTB3Q9H5J0 574 aa14.9□□□□□ -0.02
SDHA-216ENST00000514027 CPDO75976 1380 aa14.9□□□□□ -0.02
SDHA-216ENST00000514027 TAF5LO75529 589 aa14.9□□□□□ -0.02
SDHA-216ENST00000514027 ANKRD1Q15327 319 aa14.9□□□□□ -0.02
SDHA-216ENST00000514027 ZCRB1Q8TBF4 217 aaKnown RBP14.9□□□□□ -0.02
SDHA-216ENST00000514027 SEC62Q99442 399 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms