RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 NLRP3Q96P20 1036 aa18.48■□□□□ 0.55
SPCS3-204ENST00000513139 AKAP11Q9UKA4 1901 aa18.48■□□□□ 0.55
SPCS3-204ENST00000513139 TCERG1O14776 1098 aaKnown RBP18.47■□□□□ 0.55
SPCS3-204ENST00000513139 GMPSP49915 693 aaPredicted RBP18.47■□□□□ 0.55
SPCS3-204ENST00000513139 NOGQ13253 232 aa18.47■□□□□ 0.55
SPCS3-204ENST00000513139 PARP10Q53GL7 1025 aa18.47■□□□□ 0.55
SPCS3-204ENST00000513139 GIGYF2Q6Y7W6 1299 aaKnown RBP18.47■□□□□ 0.55
SPCS3-204ENST00000513139 GLIS2Q9BZE0 524 aaPredicted RBP18.47■□□□□ 0.55
SPCS3-204ENST00000513139 MIS18AQ9NYP9 233 aa18.47■□□□□ 0.55
SPCS3-204ENST00000513139 RRP7AQ9Y3A4 280 aaKnown RBP18.47■□□□□ 0.55
SPCS3-204ENST00000513139 DGKZQ13574 1117 aa18.46■□□□□ 0.55
SPCS3-204ENST00000513139 SLC10A5Q5PT55 438 aa18.46■□□□□ 0.55
SPCS3-204ENST00000513139 CDC37L1Q7L3B6 337 aa18.46■□□□□ 0.55
SPCS3-204ENST00000513139 SLC51AQ86UW1 340 aa18.46■□□□□ 0.55
SPCS3-204ENST00000513139 CFAP44Q96MT7 982 aa18.46■□□□□ 0.55
SPCS3-204ENST00000513139 ZBTB3Q9H5J0 574 aa18.46■□□□□ 0.55
SPCS3-204ENST00000513139 EIF4A1P60842 406 aaKnown RBP18.45■□□□□ 0.54
SPCS3-204ENST00000513139 TNIP1Q15025 636 aa18.45■□□□□ 0.54
SPCS3-204ENST00000513139 CIAPIN1Q6FI81 312 aa18.45■□□□□ 0.54
SPCS3-204ENST00000513139 C3orf67Q6ZVT6 689 aa18.45■□□□□ 0.54
SPCS3-204ENST00000513139 ERBB4Q15303 1308 aa18.45■□□□□ 0.54
SPCS3-204ENST00000513139 BBOX1O75936 387 aa18.44■□□□□ 0.54
SPCS3-204ENST00000513139 MYL6BP14649 208 aa18.44■□□□□ 0.54
SPCS3-204ENST00000513139 KIAA2012Q0VF49 1180 aa18.44■□□□□ 0.54
SPCS3-204ENST00000513139 SP8Q8IXZ3 490 aa18.44■□□□□ 0.54
SPCS3-204ENST00000513139 HIRAP54198 1017 aaPredicted RBP18.43■□□□□ 0.54
SPCS3-204ENST00000513139 DPP8Q6V1X1 898 aaPredicted RBP18.43■□□□□ 0.54
SPCS3-204ENST00000513139 BCL2L13Q9BXK5 485 aa18.43■□□□□ 0.54
SPCS3-204ENST00000513139 ABCC4O15439 1325 aa18.43■□□□□ 0.54
SPCS3-204ENST00000513139 TAF1P21675 1872 aa18.42■□□□□ 0.54
SPCS3-204ENST00000513139 MPNDQ8N594 471 aa18.42■□□□□ 0.54
SPCS3-204ENST00000513139 ZNF408Q9H9D4 720 aa18.42■□□□□ 0.54
SPCS3-204ENST00000513139 H7C1D1 291 aa18.41■□□□□ 0.54
SPCS3-204ENST00000513139 PPP2R1AP30153 589 aa18.41■□□□□ 0.54
SPCS3-204ENST00000513139 UTP14AQ9BVJ6 771 aaKnown RBP18.41■□□□□ 0.54
SPCS3-204ENST00000513139 CNOT7Q9UIV1 285 aaKnown RBP18.41■□□□□ 0.54
SPCS3-204ENST00000513139 LRRC37AA6NMS7 1700 aa18.4■□□□□ 0.54
SPCS3-204ENST00000513139 RAD17O75943 681 aa18.4■□□□□ 0.54
SPCS3-204ENST00000513139 NEFMP07197 916 aa18.4■□□□□ 0.54
SPCS3-204ENST00000513139 HUNKP57058 714 aa18.4■□□□□ 0.54
SPCS3-204ENST00000513139 TRPM4Q8TD43 1214 aa18.4■□□□□ 0.54
SPCS3-204ENST00000513139 SAGE1Q9NXZ1 904 aa18.4■□□□□ 0.54
SPCS3-204ENST00000513139 DPF2Q92785 391 aa18.39■□□□□ 0.53
SPCS3-204ENST00000513139 ZIC5Q96T25 663 aa18.39■□□□□ 0.53
SPCS3-204ENST00000513139 TMC4Q7Z404 712 aa18.38■□□□□ 0.53
SPCS3-204ENST00000513139 LRP10Q7Z4F1 713 aa18.38■□□□□ 0.53
SPCS3-204ENST00000513139 USP48Q86UV5 1035 aa18.38■□□□□ 0.53
SPCS3-204ENST00000513139 DUOX1Q9NRD9 1551 aa18.38■□□□□ 0.53
SPCS3-204ENST00000513139 DDX60Q8IY21 1712 aaKnown RBP18.37■□□□□ 0.53
SPCS3-204ENST00000513139 YDJCA8MPS7 323 aa18.37■□□□□ 0.53
SPCS3-204ENST00000513139 FAM155AB1AL88 458 aaPredicted RBP18.37■□□□□ 0.53
SPCS3-204ENST00000513139 RGMBQ6NW40 437 aa18.37■□□□□ 0.53
SPCS3-204ENST00000513139 DDX46Q7L014 1031 aaKnown RBP18.37■□□□□ 0.53
SPCS3-204ENST00000513139 MICALL2Q8IY33 904 aa18.37■□□□□ 0.53
SPCS3-204ENST00000513139 CCDC102AQ96A19 550 aa18.37■□□□□ 0.53
SPCS3-204ENST00000513139 GRAPQ13588 217 aa18.35■□□□□ 0.53
SPCS3-204ENST00000513139 PDIA6Q15084 440 aa18.35■□□□□ 0.53
SPCS3-204ENST00000513139 HSP90AB3PQ58FF7 597 aa18.35■□□□□ 0.53
SPCS3-204ENST00000513139 C2orf69Q8N8R5 385 aa18.35■□□□□ 0.53
SPCS3-204ENST00000513139 GRAPLQ8TC17 118 aaPredicted RBP18.35■□□□□ 0.53
SPCS3-204ENST00000513139 GBA2Q9HCG7 927 aaPredicted RBP18.35■□□□□ 0.53
SPCS3-204ENST00000513139 SHTN1A0MZ66 631 aa18.34■□□□□ 0.53
SPCS3-204ENST00000513139 NFE2L2Q16236 605 aa18.34■□□□□ 0.53
SPCS3-204ENST00000513139 KRT26Q7Z3Y9 468 aa18.34■□□□□ 0.53
SPCS3-204ENST00000513139 PLEKHF1Q96S99 279 aa18.34■□□□□ 0.53
SPCS3-204ENST00000513139 HCLS1P14317 486 aaPredicted RBP18.33■□□□□ 0.52
SPCS3-204ENST00000513139 RPS12P25398 132 aaKnown RBP18.33■□□□□ 0.52
SPCS3-204ENST00000513139 NLRP10Q86W26 655 aa18.33■□□□□ 0.52
SPCS3-204ENST00000513139 THUMPD2Q9BTF0 503 aaKnown RBP18.33■□□□□ 0.52
SPCS3-204ENST00000513139 PSMD14O00487 310 aa18.32■□□□□ 0.52
SPCS3-204ENST00000513139 KIF23Q02241 960 aaPredicted RBP18.32■□□□□ 0.52
SPCS3-204ENST00000513139 SAMD7Q7Z3H4 446 aa18.32■□□□□ 0.52
SPCS3-204ENST00000513139 DCPSQ96C86 337 aaKnown RBP18.32■□□□□ 0.52
SPCS3-204ENST00000513139 RNF186Q9NXI6 227 aa18.32■□□□□ 0.52
SPCS3-204ENST00000513139 ZBTB12Q9Y330 459 aaPredicted RBP18.32■□□□□ 0.52
SPCS3-204ENST00000513139 SH3TC1Q8TE82 1336 aa18.31■□□□□ 0.52
SPCS3-204ENST00000513139 ZNF157P51786 506 aaPredicted RBP18.31■□□□□ 0.52
SPCS3-204ENST00000513139 WASHC4Q2M389 1173 aa18.31■□□□□ 0.52
SPCS3-204ENST00000513139 REM2Q8IYK8 340 aaPredicted RBP18.31■□□□□ 0.52
SPCS3-204ENST00000513139 PNNQ9H307 717 aaKnown RBP18.31■□□□□ 0.52
SPCS3-204ENST00000513139 SPINK5Q9NQ38 1064 aaPredicted RBP18.31■□□□□ 0.52
SPCS3-204ENST00000513139 TRMT112Q9UI30 125 aaKnown RBP18.31■□□□□ 0.52
SPCS3-204ENST00000513139 SCN9AQ15858 1988 aa18.3■□□□□ 0.52
SPCS3-204ENST00000513139 TRPA1O75762 1119 aa18.3■□□□□ 0.52
SPCS3-204ENST00000513139 EIF2S2P20042 333 aaKnown RBP18.3■□□□□ 0.52
SPCS3-204ENST00000513139 TCIRG1Q13488 830 aa18.3■□□□□ 0.52
SPCS3-204ENST00000513139 TBC1D10BQ4KMP7 808 aaPredicted RBP18.3■□□□□ 0.52
SPCS3-204ENST00000513139 DLK2Q6UY11 383 aa18.3■□□□□ 0.52
SPCS3-204ENST00000513139 BABAM1Q9NWV8 329 aa18.3■□□□□ 0.52
SPCS3-204ENST00000513139 TSPYL4Q9UJ04 414 aa18.3■□□□□ 0.52
SPCS3-204ENST00000513139 PSME4Q14997 1843 aa18.29■□□□□ 0.52
SPCS3-204ENST00000513139 SLC10A3P09131 477 aa18.29■□□□□ 0.52
SPCS3-204ENST00000513139 SOX10P56693 466 aa18.29■□□□□ 0.52
SPCS3-204ENST00000513139 PROSER3Q2NL68 480 aa18.29■□□□□ 0.52
SPCS3-204ENST00000513139 PRPF38BQ5VTL8 546 aaKnown RBP18.29■□□□□ 0.52
SPCS3-204ENST00000513139 COPS6Q7L5N1 327 aa18.29■□□□□ 0.52
SPCS3-204ENST00000513139 CTU1Q7Z7A3 348 aaKnown RBP18.29■□□□□ 0.52
SPCS3-204ENST00000513139 EGFRP00533 1210 aa18.28■□□□□ 0.52
SPCS3-204ENST00000513139 CSRNP1Q96S65 589 aa18.28■□□□□ 0.52
SPCS3-204ENST00000513139 DBNDD1Q9H9R9 158 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms