RNA–Protein interactions for RNA: ENST00000510866.5

KDM3B-207, Transcript of lysine demethylase 3B, humanhuman

TSL 1 (best)

Gene KDM3B, Length 6,324 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-207ENST00000510866 NEK1Q96PY6 1258 aa8.33□□□□□ -1.08
KDM3B-207ENST00000510866 CCDC87Q9NVE4 849 aa8.33□□□□□ -1.08
KDM3B-207ENST00000510866 UGGT1Q9NYU2 1555 aa8.32□□□□□ -1.08
KDM3B-207ENST00000510866 TRMT1LQ7Z2T5 733 aaKnown RBP8.32□□□□□ -1.08
KDM3B-207ENST00000510866 KRT23Q9C075 422 aa8.32□□□□□ -1.08
KDM3B-207ENST00000510866 EFCAB6Q5THR3 1501 aa8.32□□□□□ -1.08
KDM3B-207ENST00000510866 TMEM94Q12767 1356 aa8.32□□□□□ -1.08
KDM3B-207ENST00000510866 CBFA2T2O43439 604 aa8.32□□□□□ -1.08
KDM3B-207ENST00000510866 HMGN5P82970 282 aaKnown RBP8.32□□□□□ -1.08
KDM3B-207ENST00000510866 LIMCH1Q9UPQ0 1083 aa8.32□□□□□ -1.08
KDM3B-207ENST00000510866 PPP1R12BO60237 982 aaPredicted RBP8.32□□□□□ -1.08
KDM3B-207ENST00000510866 IL13P35225 146 aa8.32□□□□□ -1.08
KDM3B-207ENST00000510866 IARSP41252 1262 aaKnown RBP8.32□□□□□ -1.08
KDM3B-207ENST00000510866 BICC1Q9H694 974 aaKnown RBP8.32□□□□□ -1.08
KDM3B-207ENST00000510866 UFL1O94874 794 aa8.32□□□□□ -1.08
KDM3B-207ENST00000510866 MRE11P49959 708 aa8.32□□□□□ -1.08
KDM3B-207ENST00000510866 TFCP2Q12800 502 aa8.32□□□□□ -1.08
KDM3B-207ENST00000510866 WTAPQ15007 396 aa8.32□□□□□ -1.08
KDM3B-207ENST00000510866 CCDC178Q5BJE1 867 aa8.32□□□□□ -1.08
KDM3B-207ENST00000510866 IFIT1BQ5T764 474 aaKnown RBP8.32□□□□□ -1.08
KDM3B-207ENST00000510866 SLC26A6Q9BXS9 759 aa8.32□□□□□ -1.08
KDM3B-207ENST00000510866 LUC7LQ9NQ29 371 aaKnown RBP8.32□□□□□ -1.08
KDM3B-207ENST00000510866 PAG1Q9NWQ8 432 aa8.32□□□□□ -1.08
KDM3B-207ENST00000510866 PARP10Q53GL7 1025 aa8.32□□□□□ -1.08
KDM3B-207ENST00000510866 TBC1D9Q6ZT07 1266 aa8.32□□□□□ -1.08
KDM3B-207ENST00000510866 HMG20BQ9P0W2 317 aa8.32□□□□□ -1.08
KDM3B-207ENST00000510866 SAMM50Q9Y512 469 aa8.32□□□□□ -1.08
KDM3B-207ENST00000510866 H0YIN7 160 aa8.31□□□□□ -1.08
KDM3B-207ENST00000510866 LDHBP07195 334 aaKnown RBP8.31□□□□□ -1.08
KDM3B-207ENST00000510866 PPP4R3BQ5MIZ7 849 aa8.31□□□□□ -1.08
KDM3B-207ENST00000510866 MAGEB6Q8N7X4 407 aa8.31□□□□□ -1.08
KDM3B-207ENST00000510866 PLBD2Q8NHP8 589 aa8.31□□□□□ -1.08
KDM3B-207ENST00000510866 TSG101Q99816 390 aa8.31□□□□□ -1.08
KDM3B-207ENST00000510866 LGR6Q9HBX8 967 aa8.31□□□□□ -1.08
KDM3B-207ENST00000510866 CCP110O43303 1012 aa8.31□□□□□ -1.08
KDM3B-207ENST00000510866 FAM89AQ96GI7 184 aa8.31□□□□□ -1.08
KDM3B-207ENST00000510866 DNAI2Q9GZS0 605 aa8.31□□□□□ -1.08
KDM3B-207ENST00000510866 MYO6Q9UM54 1294 aa8.31□□□□□ -1.08
KDM3B-207ENST00000510866 SAMD9LQ8IVG5 1584 aa8.31□□□□□ -1.08
KDM3B-207ENST00000510866 HCLS1P14317 486 aaPredicted RBP8.31□□□□□ -1.08
KDM3B-207ENST00000510866 MCM5P33992 734 aa8.31□□□□□ -1.08
KDM3B-207ENST00000510866 DDX21Q9NR30 783 aaKnown RBP eCLIP8.31□□□□□ -1.08
KDM3B-207ENST00000510866 DESP17661 470 aa8.31□□□□□ -1.08
KDM3B-207ENST00000510866 PLS1Q14651 629 aa8.31□□□□□ -1.08
KDM3B-207ENST00000510866 CAMK4Q16566 473 aa8.31□□□□□ -1.08
KDM3B-207ENST00000510866 MIGA1Q8NAN2 632 aa8.31□□□□□ -1.08
KDM3B-207ENST00000510866 ESR2Q92731 530 aa8.31□□□□□ -1.08
KDM3B-207ENST00000510866 TTC37Q6PGP7 1564 aa8.31□□□□□ -1.08
KDM3B-207ENST00000510866 MAGI3Q5TCQ9 1506 aa8.31□□□□□ -1.08
KDM3B-207ENST00000510866 ECM2O94769 699 aaPredicted RBP8.31□□□□□ -1.08
KDM3B-207ENST00000510866 MCMDC2Q4G0Z9 681 aa8.31□□□□□ -1.08
KDM3B-207ENST00000510866 ANKRD44Q8N8A2 993 aa8.31□□□□□ -1.08
KDM3B-207ENST00000510866 VAMP4O75379 141 aa8.3□□□□□ -1.08
KDM3B-207ENST00000510866 IGHDP01880 384 aa8.3□□□□□ -1.08
KDM3B-207ENST00000510866 PLCG2P16885 1265 aa8.3□□□□□ -1.08
KDM3B-207ENST00000510866 NUCB1Q02818 461 aa8.3□□□□□ -1.08
KDM3B-207ENST00000510866 PLEKHG1Q9ULL1 1385 aa8.3□□□□□ -1.08
KDM3B-207ENST00000510866 PLXNC1O60486 1568 aa8.3□□□□□ -1.08
KDM3B-207ENST00000510866 HECW2Q9P2P5 1572 aa8.3□□□□□ -1.08
KDM3B-207ENST00000510866 TMEM87AQ8NBN3 555 aa8.3□□□□□ -1.08
KDM3B-207ENST00000510866 CNNM2Q9H8M5 875 aa8.3□□□□□ -1.08
KDM3B-207ENST00000510866 QTRT2Q9H974 415 aaKnown RBP8.3□□□□□ -1.08
KDM3B-207ENST00000510866 SPDYE4A6NLX3 237 aa8.3□□□□□ -1.08
KDM3B-207ENST00000510866 PPFIA3O75145 1194 aa8.3□□□□□ -1.08
KDM3B-207ENST00000510866 A1BGP04217 495 aa8.3□□□□□ -1.08
KDM3B-207ENST00000510866 TNNI2P48788 182 aa8.3□□□□□ -1.08
KDM3B-207ENST00000510866 EIF5P55010 431 aaKnown RBP8.3□□□□□ -1.08
KDM3B-207ENST00000510866 SMTNL1A8MU46 457 aa8.3□□□□□ -1.08
KDM3B-207ENST00000510866 ITGA6P23229 1130 aa8.3□□□□□ -1.08
KDM3B-207ENST00000510866 CIZ1Q9ULV3 898 aaPredicted RBP8.3□□□□□ -1.08
KDM3B-207ENST00000510866 TXLNBQ8N3L3 684 aa8.3□□□□□ -1.08
KDM3B-207ENST00000510866 CCDC24Q8N4L8 307 aa8.3□□□□□ -1.08
KDM3B-207ENST00000510866 GJB2P29033 226 aa8.29□□□□□ -1.08
KDM3B-207ENST00000510866 BMP2KLQ5H9B9 411 aa8.29□□□□□ -1.08
KDM3B-207ENST00000510866 VTI1AQ96AJ9 217 aa8.29□□□□□ -1.08
KDM3B-207ENST00000510866 CALML4Q96GE6 196 aa8.29□□□□□ -1.08
KDM3B-207ENST00000510866 MCM9Q9NXL9 1143 aa8.29□□□□□ -1.08
KDM3B-207ENST00000510866 GGA1Q9UJY5 639 aa8.29□□□□□ -1.08
KDM3B-207ENST00000510866 SOS1Q07889 1333 aaPredicted RBP8.29□□□□□ -1.08
KDM3B-207ENST00000510866 METTL22Q9BUU2 404 aaPredicted RBP8.29□□□□□ -1.08
KDM3B-207ENST00000510866 ORC3Q9UBD5 711 aaPredicted RBP8.29□□□□□ -1.08
KDM3B-207ENST00000510866 KLF18A0A0U1RQI7 1052 aa8.29□□□□□ -1.08
KDM3B-207ENST00000510866 PLEKHG3A1L390 1219 aa8.29□□□□□ -1.08
KDM3B-207ENST00000510866 PDE8AO60658 829 aa8.29□□□□□ -1.08
KDM3B-207ENST00000510866 CDR1P51861 262 aa8.29□□□□□ -1.08
KDM3B-207ENST00000510866 HDAC1Q13547 482 aaPredicted RBP8.29□□□□□ -1.08
KDM3B-207ENST00000510866 MSL1Q68DK7 614 aa8.29□□□□□ -1.08
KDM3B-207ENST00000510866 NLRP1Q9C000 1473 aa8.29□□□□□ -1.08
KDM3B-207ENST00000510866 SH3TC1Q8TE82 1336 aa8.29□□□□□ -1.08
KDM3B-207ENST00000510866 MAGI2Q86UL8 1455 aa8.29□□□□□ -1.08
KDM3B-207ENST00000510866 NEBLO76041 1014 aa8.29□□□□□ -1.08
KDM3B-207ENST00000510866 POTEJP0CG39 1038 aa8.29□□□□□ -1.08
KDM3B-207ENST00000510866 GNAT2P19087 354 aa8.29□□□□□ -1.08
KDM3B-207ENST00000510866 KLHL10Q6JEL2 608 aa8.29□□□□□ -1.08
KDM3B-207ENST00000510866 HEATR3Q7Z4Q2 680 aa8.29□□□□□ -1.08
KDM3B-207ENST00000510866 DNAJC10Q8IXB1 793 aa8.29□□□□□ -1.08
KDM3B-207ENST00000510866 ARGLU1Q9NWB6 273 aaPredicted RBP8.29□□□□□ -1.08
KDM3B-207ENST00000510866 DENND2AQ9ULE3 1009 aa8.29□□□□□ -1.08
KDM3B-207ENST00000510866 RNF113AO15541 343 aaKnown RBP8.28□□□□□ -1.08
KDM3B-207ENST00000510866 PDE1AP54750 535 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms