RNA–Protein interactions for RNA: ENST00000510599.5

UBE2D3-230, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-230ENST00000510599 USP17L21D6R901 530 aa7.56□□□□□ -1.2
UBE2D3-230ENST00000510599 USP17L18D6R9N7 530 aa7.56□□□□□ -1.2
UBE2D3-230ENST00000510599 USP17L22D6RA61 530 aa7.56□□□□□ -1.2
UBE2D3-230ENST00000510599 USP17L17D6RBQ6 530 aa7.56□□□□□ -1.2
UBE2D3-230ENST00000510599 USP17L19D6RCP7 530 aa7.56□□□□□ -1.2
UBE2D3-230ENST00000510599 USP17L20D6RJB6 530 aa7.56□□□□□ -1.2
UBE2D3-230ENST00000510599 GPLD1P80108 840 aa7.56□□□□□ -1.2
UBE2D3-230ENST00000510599 USP17L24Q0WX57 530 aa7.56□□□□□ -1.2
UBE2D3-230ENST00000510599 CRTC2Q53ET0 693 aaPredicted RBP7.56□□□□□ -1.2
UBE2D3-230ENST00000510599 KRT25Q7Z3Z0 450 aa7.56□□□□□ -1.2
UBE2D3-230ENST00000510599 WFDC8Q8IUA0 241 aa7.56□□□□□ -1.2
UBE2D3-230ENST00000510599 TRPM4Q8TD43 1214 aa7.56□□□□□ -1.2
UBE2D3-230ENST00000510599 KLK14Q9P0G3 267 aa7.56□□□□□ -1.2
UBE2D3-230ENST00000510599 ABCC9O60706 1549 aa7.56□□□□□ -1.2
UBE2D3-230ENST00000510599 RB1CC1Q8TDY2 1594 aa7.55□□□□□ -1.2
UBE2D3-230ENST00000510599 FAM196BA6NMK8 535 aa7.55□□□□□ -1.2
UBE2D3-230ENST00000510599 RARAP10276 462 aa7.55□□□□□ -1.2
UBE2D3-230ENST00000510599 GRNP28799 593 aaKnown RBP7.55□□□□□ -1.2
UBE2D3-230ENST00000510599 DGKZQ13574 1117 aa7.55□□□□□ -1.2
UBE2D3-230ENST00000510599 PERM1Q5SV97 790 aa7.55□□□□□ -1.2
UBE2D3-230ENST00000510599 ANKMY2Q8IV38 441 aa7.55□□□□□ -1.2
UBE2D3-230ENST00000510599 WFDC12Q8WWY7 111 aa7.55□□□□□ -1.2
UBE2D3-230ENST00000510599 TTC9Q92623 222 aa7.55□□□□□ -1.2
UBE2D3-230ENST00000510599 VTI1AQ96AJ9 217 aa7.55□□□□□ -1.2
UBE2D3-230ENST00000510599 ZFATQ9P243 1243 aa7.55□□□□□ -1.2
UBE2D3-230ENST00000510599 SCRIBQ14160 1630 aa7.55□□□□□ -1.2
UBE2D3-230ENST00000510599 FOXO3O43524 673 aa7.54□□□□□ -1.2
UBE2D3-230ENST00000510599 LGR5O75473 907 aa7.54□□□□□ -1.2
UBE2D3-230ENST00000510599 GRIK5Q16478 980 aa7.54□□□□□ -1.2
UBE2D3-230ENST00000510599 IGF2-ASQ6U949 168 aa7.54□□□□□ -1.2
UBE2D3-230ENST00000510599 KRTAP9-6A0A140TA67 174 aa7.53□□□□□ -1.2
UBE2D3-230ENST00000510599 HYAL3O43820 417 aaPredicted RBP7.53□□□□□ -1.2
UBE2D3-230ENST00000510599 IREB2P48200 963 aaKnown RBP7.53□□□□□ -1.2
UBE2D3-230ENST00000510599 NRLP54845 237 aa7.53□□□□□ -1.2
UBE2D3-230ENST00000510599 MLLT1Q03111 559 aaPredicted RBP7.53□□□□□ -1.2
UBE2D3-230ENST00000510599 FNBP4Q8N3X1 1017 aaPredicted RBP7.53□□□□□ -1.2
UBE2D3-230ENST00000510599 CLUAP1Q96AJ1 413 aa7.53□□□□□ -1.2
UBE2D3-230ENST00000510599 IFT43Q96FT9 208 aa7.53□□□□□ -1.2
UBE2D3-230ENST00000510599 CALR3Q96L12 384 aaKnown RBP7.53□□□□□ -1.2
UBE2D3-230ENST00000510599 PPP1R12CQ9BZL4 782 aa7.53□□□□□ -1.2
UBE2D3-230ENST00000510599 QTRT2Q9H974 415 aaKnown RBP7.53□□□□□ -1.2
UBE2D3-230ENST00000510599 ZBTB42B2RXF5 422 aa7.52□□□□□ -1.21
UBE2D3-230ENST00000510599 MICAL2O94851 1124 aa7.52□□□□□ -1.21
UBE2D3-230ENST00000510599 TARSP26639 723 aaKnown RBP7.52□□□□□ -1.21
UBE2D3-230ENST00000510599 NOS3P29474 1203 aa7.52□□□□□ -1.21
UBE2D3-230ENST00000510599 C11orf91Q3C1V1 193 aa7.52□□□□□ -1.21
UBE2D3-230ENST00000510599 KANK4Q5T7N3 995 aaPredicted RBP7.52□□□□□ -1.21
UBE2D3-230ENST00000510599 MYO19Q96H55 970 aa7.52□□□□□ -1.21
UBE2D3-230ENST00000510599 SMG9Q9H0W8 520 aaKnown RBP7.52□□□□□ -1.21
UBE2D3-230ENST00000510599 VRTNQ9H8Y1 702 aa7.52□□□□□ -1.21
UBE2D3-230ENST00000510599 SASH3O75995 380 aa7.51□□□□□ -1.21
UBE2D3-230ENST00000510599 EIF2AK2P19525 551 aaKnown RBP7.51□□□□□ -1.21
UBE2D3-230ENST00000510599 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.51□□□□□ -1.21
UBE2D3-230ENST00000510599 RNF112Q9ULX5 631 aa7.51□□□□□ -1.21
UBE2D3-230ENST00000510599 UNC13AQ9UPW8 1703 aa7.51□□□□□ -1.21
UBE2D3-230ENST00000510599 PRKCSHP14314 528 aaPredicted RBP7.5□□□□□ -1.21
UBE2D3-230ENST00000510599 WEE1P30291 646 aa7.5□□□□□ -1.21
UBE2D3-230ENST00000510599 PLAURQ03405 335 aa7.5□□□□□ -1.21
UBE2D3-230ENST00000510599 DCAF11Q8TEB1 546 aa7.5□□□□□ -1.21
UBE2D3-230ENST00000510599 MEGF10Q96KG7 1140 aa7.5□□□□□ -1.21
UBE2D3-230ENST00000510599 EGFRP00533 1210 aa7.49□□□□□ -1.21
UBE2D3-230ENST00000510599 LMOD1P29536 600 aaPredicted RBP7.49□□□□□ -1.21
UBE2D3-230ENST00000510599 PRR23CQ6ZRP0 262 aa7.49□□□□□ -1.21
UBE2D3-230ENST00000510599 HFE2Q6ZVN8 426 aa7.49□□□□□ -1.21
UBE2D3-230ENST00000510599 TLR7Q9NYK1 1049 aaKnown RBP7.49□□□□□ -1.21
UBE2D3-230ENST00000510599 RTCBQ9Y3I0 505 aaKnown RBP7.49□□□□□ -1.21
UBE2D3-230ENST00000510599 SUPT5HO00267 1087 aaKnown RBP7.48□□□□□ -1.21
UBE2D3-230ENST00000510599 DEAF1O75398 565 aaPredicted RBP7.48□□□□□ -1.21
UBE2D3-230ENST00000510599 PSAPP07602 524 aa7.48□□□□□ -1.21
UBE2D3-230ENST00000510599 ARXQ96QS3 562 aa7.48□□□□□ -1.21
UBE2D3-230ENST00000510599 RBSNQ9H1K0 784 aa7.48□□□□□ -1.21
UBE2D3-230ENST00000510599 AKTIPQ9H8T0 292 aa7.48□□□□□ -1.21
UBE2D3-230ENST00000510599 SRA1Q9HD15 236 aaKnown RBP7.48□□□□□ -1.21
UBE2D3-230ENST00000510599 DLL1O00548 723 aa7.47□□□□□ -1.21
UBE2D3-230ENST00000510599 XYLBO75191 536 aa7.47□□□□□ -1.21
UBE2D3-230ENST00000510599 GHRHP01286 108 aa7.47□□□□□ -1.21
UBE2D3-230ENST00000510599 PLD4Q96BZ4 506 aa7.47□□□□□ -1.21
UBE2D3-230ENST00000510599 MRPL18Q9H0U6 180 aaKnown RBP7.47□□□□□ -1.21
UBE2D3-230ENST00000510599 SLC51AQ86UW1 340 aa7.46□□□□□ -1.22
UBE2D3-230ENST00000510599 TREML1Q86YW5 311 aa7.46□□□□□ -1.22
UBE2D3-230ENST00000510599 MAP4K3Q8IVH8 894 aa7.46□□□□□ -1.22
UBE2D3-230ENST00000510599 DZIP1LQ8IYY4 767 aaKnown RBP7.46□□□□□ -1.22
UBE2D3-230ENST00000510599 RGL4Q8IZJ4 473 aa7.46□□□□□ -1.22
UBE2D3-230ENST00000510599 CMTR1Q8N1G2 835 aaKnown RBP7.46□□□□□ -1.22
UBE2D3-230ENST00000510599 LOC102724428A0A0B4J2F2 783 aa7.45□□□□□ -1.22
UBE2D3-230ENST00000510599 OPLAHO14841 1288 aa7.45□□□□□ -1.22
UBE2D3-230ENST00000510599 SOX18P35713 384 aa7.45□□□□□ -1.22
UBE2D3-230ENST00000510599 SIK1P57059 783 aa7.45□□□□□ -1.22
UBE2D3-230ENST00000510599 FAM200AQ8TCP9 573 aa7.45□□□□□ -1.22
UBE2D3-230ENST00000510599 USP20Q9Y2K6 914 aa7.45□□□□□ -1.22
UBE2D3-230ENST00000510599 HOXD8P13378 290 aaPredicted RBP7.44□□□□□ -1.22
UBE2D3-230ENST00000510599 GDF6Q6KF10 455 aaPredicted RBP7.44□□□□□ -1.22
UBE2D3-230ENST00000510599 KRTAP1-3Q8IUG1 177 aa7.44□□□□□ -1.22
UBE2D3-230ENST00000510599 TMEM130Q8N3G9 435 aa7.44□□□□□ -1.22
UBE2D3-230ENST00000510599 IL22RA1Q8N6P7 574 aa7.44□□□□□ -1.22
UBE2D3-230ENST00000510599 NSUN5Q96P11 429 aaKnown RBP7.44□□□□□ -1.22
UBE2D3-230ENST00000510599 LRFN2Q9ULH4 789 aa7.44□□□□□ -1.22
UBE2D3-230ENST00000510599 A6NJR5 290 aa7.43□□□□□ -1.22
UBE2D3-230ENST00000510599 F8W735 103 aaPredicted RBP7.43□□□□□ -1.22
UBE2D3-230ENST00000510599 J3QW42 95 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms