RNA–Protein interactions for RNA: ENST00000510003.5

SNCAIP-214, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best)

Gene SNCAIP, Length 2,039 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-214ENST00000510003 LARP1Q6PKG0 1096 aaKnown RBP17.19■□□□□ 0.34
SNCAIP-214ENST00000510003 BICD2Q8TD16 824 aa17.19■□□□□ 0.34
SNCAIP-214ENST00000510003 ALDH1L1O75891 902 aa17.18■□□□□ 0.34
SNCAIP-214ENST00000510003 CCDC144BQ3MJ40 725 aa17.18■□□□□ 0.34
SNCAIP-214ENST00000510003 CCDC144CPQ8IYA2 1237 aa17.18■□□□□ 0.34
SNCAIP-214ENST00000510003 PGBD1Q96JS3 809 aa17.18■□□□□ 0.34
SNCAIP-214ENST00000510003 CEMIPQ8WUJ3 1361 aa17.18■□□□□ 0.34
SNCAIP-214ENST00000510003 CCDC66A2RUB6 948 aa17.18■□□□□ 0.34
SNCAIP-214ENST00000510003 KRT32Q14532 448 aa17.18■□□□□ 0.34
SNCAIP-214ENST00000510003 STX1AQ16623 288 aa17.18■□□□□ 0.34
SNCAIP-214ENST00000510003 FAM173BQ6P4H8 233 aa17.18■□□□□ 0.34
SNCAIP-214ENST00000510003 MED23Q9ULK4 1368 aa17.17■□□□□ 0.34
SNCAIP-214ENST00000510003 RESTQ13127 1097 aa17.17■□□□□ 0.34
SNCAIP-214ENST00000510003 TOB2Q14106 344 aaPredicted RBP17.17■□□□□ 0.34
SNCAIP-214ENST00000510003 TERF2Q15554 542 aa17.17■□□□□ 0.34
SNCAIP-214ENST00000510003 SOX12O15370 315 aa17.16■□□□□ 0.34
SNCAIP-214ENST00000510003 NMIQ13287 307 aaPredicted RBP17.16■□□□□ 0.34
SNCAIP-214ENST00000510003 DHX8Q14562 1220 aaKnown RBP17.16■□□□□ 0.34
SNCAIP-214ENST00000510003 TFIP11Q9UBB9 837 aaKnown RBP17.16■□□□□ 0.34
SNCAIP-214ENST00000510003 USP54Q70EL1 1684 aa17.16■□□□□ 0.34
SNCAIP-214ENST00000510003 PI4KAP2A4QPH2 592 aa17.16■□□□□ 0.34
SNCAIP-214ENST00000510003 GSDMDP57764 484 aa17.16■□□□□ 0.34
SNCAIP-214ENST00000510003 EIF4A1P60842 406 aaKnown RBP17.16■□□□□ 0.34
SNCAIP-214ENST00000510003 PI4KAP1Q8N8J0 262 aa17.16■□□□□ 0.34
SNCAIP-214ENST00000510003 PIK3C2AO00443 1686 aa17.15■□□□□ 0.34
SNCAIP-214ENST00000510003 TUBB4AP04350 444 aa17.15■□□□□ 0.34
SNCAIP-214ENST00000510003 ATL3Q6DD88 541 aa17.15■□□□□ 0.34
SNCAIP-214ENST00000510003 GTF3C6Q969F1 213 aa17.15■□□□□ 0.34
SNCAIP-214ENST00000510003 KDM3BQ7LBC6 1761 aa17.15■□□□□ 0.34
SNCAIP-214ENST00000510003 ADCY9O60503 1353 aa17.15■□□□□ 0.34
SNCAIP-214ENST00000510003 SKILP12757 684 aa17.14■□□□□ 0.34
SNCAIP-214ENST00000510003 FAM227BQ96M60 508 aa17.14■□□□□ 0.34
SNCAIP-214ENST00000510003 SLU7O95391 586 aaKnown RBP17.14■□□□□ 0.33
SNCAIP-214ENST00000510003 HOXC9P31274 260 aa17.14■□□□□ 0.33
SNCAIP-214ENST00000510003 KMT5BQ4FZB7 885 aa17.14■□□□□ 0.33
SNCAIP-214ENST00000510003 AACSQ86V21 672 aa17.14■□□□□ 0.33
SNCAIP-214ENST00000510003 ZNF215Q9UL58 517 aaPredicted RBP17.14■□□□□ 0.33
SNCAIP-214ENST00000510003 USPL1Q5W0Q7 1092 aa17.13■□□□□ 0.33
SNCAIP-214ENST00000510003 CCAR2Q8N163 923 aaKnown RBP17.13■□□□□ 0.33
SNCAIP-214ENST00000510003 LLPHQ9BRT6 129 aaKnown RBP17.13■□□□□ 0.33
SNCAIP-214ENST00000510003 ANO10Q9NW15 660 aa17.13■□□□□ 0.33
SNCAIP-214ENST00000510003 CHPF2Q9P2E5 772 aa17.13■□□□□ 0.33
SNCAIP-214ENST00000510003 IMPACTQ9P2X3 320 aa17.13■□□□□ 0.33
SNCAIP-214ENST00000510003 KCNJ6P48051 423 aa17.13■□□□□ 0.33
SNCAIP-214ENST00000510003 CCZ1BP86790 482 aa17.13■□□□□ 0.33
SNCAIP-214ENST00000510003 CCZ1P86791 482 aaPredicted RBP17.13■□□□□ 0.33
SNCAIP-214ENST00000510003 NAA30Q147X3 362 aaPredicted RBP17.13■□□□□ 0.33
SNCAIP-214ENST00000510003 ZNF592Q92610 1267 aa17.13■□□□□ 0.33
SNCAIP-214ENST00000510003 AMOTL2Q9Y2J4 779 aa17.13■□□□□ 0.33
SNCAIP-214ENST00000510003 CCDC69A6NI79 296 aa17.12■□□□□ 0.33
SNCAIP-214ENST00000510003 DDX54Q8TDD1 881 aaKnown RBP17.12■□□□□ 0.33
SNCAIP-214ENST00000510003 RCOR1Q9UKL0 485 aa17.12■□□□□ 0.33
SNCAIP-214ENST00000510003 RFX7Q2KHR2 1363 aa17.12■□□□□ 0.33
SNCAIP-214ENST00000510003 BECN2A8MW95 431 aa17.11■□□□□ 0.33
SNCAIP-214ENST00000510003 H3BQV1 296 aa17.11■□□□□ 0.33
SNCAIP-214ENST00000510003 IGSF3O75054 1194 aa17.11■□□□□ 0.33
SNCAIP-214ENST00000510003 EIF2S2P20042 333 aaKnown RBP17.11■□□□□ 0.33
SNCAIP-214ENST00000510003 IFFO2Q5TF58 517 aa17.11■□□□□ 0.33
SNCAIP-214ENST00000510003 NAA16Q6N069 864 aaPredicted RBP17.11■□□□□ 0.33
SNCAIP-214ENST00000510003 BRF1Q92994 677 aa17.11■□□□□ 0.33
SNCAIP-214ENST00000510003 OSBPL5Q9H0X9 879 aaPredicted RBP17.11■□□□□ 0.33
SNCAIP-214ENST00000510003 DTNBO60941 627 aa17.11■□□□□ 0.33
SNCAIP-214ENST00000510003 C11orf57Q6ZUT1 292 aaPredicted RBP17.11■□□□□ 0.33
SNCAIP-214ENST00000510003 NAT10Q9H0A0 1025 aaKnown RBP17.11■□□□□ 0.33
SNCAIP-214ENST00000510003 C9orf78Q9NZ63 289 aaPredicted RBP17.11■□□□□ 0.33
SNCAIP-214ENST00000510003 DBF4Q9UBU7 674 aaPredicted RBP17.11■□□□□ 0.33
SNCAIP-214ENST00000510003 UTYO14607 1347 aa17.1■□□□□ 0.33
SNCAIP-214ENST00000510003 ZNF335Q9H4Z2 1342 aaPredicted RBP17.1■□□□□ 0.33
SNCAIP-214ENST00000510003 A0A0D9SFI3 127 aa17.1■□□□□ 0.33
SNCAIP-214ENST00000510003 USP27XA6NNY8 438 aa17.1■□□□□ 0.33
SNCAIP-214ENST00000510003 FBXO38Q6PIJ6 1188 aa17.1■□□□□ 0.33
SNCAIP-214ENST00000510003 SMARCC2Q8TAQ2 1214 aa17.1■□□□□ 0.33
SNCAIP-214ENST00000510003 FSD1Q9BTV5 496 aa17.1■□□□□ 0.33
SNCAIP-214ENST00000510003 L2HGDHQ9H9P8 463 aa17.1■□□□□ 0.33
SNCAIP-214ENST00000510003 MRC1P22897 1456 aa17.1■□□□□ 0.33
SNCAIP-214ENST00000510003 KCNA6P17658 529 aa17.09■□□□□ 0.33
SNCAIP-214ENST00000510003 G3BP1Q13283 466 aaKnown RBP eCLIP17.09■□□□□ 0.33
SNCAIP-214ENST00000510003 CCDC73Q6ZRK6 1079 aa17.09■□□□□ 0.33
SNCAIP-214ENST00000510003 DHX40Q8IX18 779 aaKnown RBP17.09■□□□□ 0.33
SNCAIP-214ENST00000510003 CEP57L1Q8IYX8 460 aa17.09■□□□□ 0.33
SNCAIP-214ENST00000510003 BMS1Q14692 1282 aaKnown RBP17.09■□□□□ 0.33
SNCAIP-214ENST00000510003 NGDNQ8NEJ9 315 aaKnown RBP17.09■□□□□ 0.33
SNCAIP-214ENST00000510003 PSDA5PKW4 1024 aaPredicted RBP17.08■□□□□ 0.33
SNCAIP-214ENST00000510003 KINO60870 393 aaKnown RBP17.08■□□□□ 0.33
SNCAIP-214ENST00000510003 TAF5LO75529 589 aa17.08■□□□□ 0.33
SNCAIP-214ENST00000510003 SASH1O94885 1247 aa17.08■□□□□ 0.33
SNCAIP-214ENST00000510003 ADD1P35611 737 aaKnown RBP17.08■□□□□ 0.33
SNCAIP-214ENST00000510003 KSR2Q6VAB6 950 aa17.08■□□□□ 0.33
SNCAIP-214ENST00000510003 CCAR1Q8IX12 1150 aaKnown RBP17.08■□□□□ 0.33
SNCAIP-214ENST00000510003 CCDC150Q8NCX0 1101 aa17.08■□□□□ 0.33
SNCAIP-214ENST00000510003 EAF2Q96CJ1 260 aaPredicted RBP17.08■□□□□ 0.33
SNCAIP-214ENST00000510003 ZNF396Q96N95 335 aaPredicted RBP17.08■□□□□ 0.33
SNCAIP-214ENST00000510003 NEK1Q96PY6 1258 aa17.08■□□□□ 0.33
SNCAIP-214ENST00000510003 MYH15Q9Y2K3 1946 aa17.08■□□□□ 0.32
SNCAIP-214ENST00000510003 A0A0U1RQG5 324 aaPredicted RBP17.08■□□□□ 0.32
SNCAIP-214ENST00000510003 NUTM2FA1L443 756 aa17.08■□□□□ 0.32
SNCAIP-214ENST00000510003 JAK2O60674 1132 aa17.08■□□□□ 0.32
SNCAIP-214ENST00000510003 H2AFXP16104 143 aaPredicted RBP17.08■□□□□ 0.32
SNCAIP-214ENST00000510003 FAM160A1Q05DH4 1040 aa17.08■□□□□ 0.32
SNCAIP-214ENST00000510003 ELF2Q15723 593 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms