RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 ZCCHC2Q9C0B9 1178 aaKnown RBP5.79□□□□□ -1.48
UBE2D3-226ENST00000508635 CRISPLD1Q9H336 500 aa5.79□□□□□ -1.48
UBE2D3-226ENST00000508635 USTQ9Y2C2 406 aa5.79□□□□□ -1.48
UBE2D3-226ENST00000508635 COL8A1P27658 744 aa5.78□□□□□ -1.48
UBE2D3-226ENST00000508635 SSFA2P28290 1259 aa5.78□□□□□ -1.48
UBE2D3-226ENST00000508635 C1orf53Q5VUE5 145 aa5.78□□□□□ -1.48
UBE2D3-226ENST00000508635 ZNF280CQ8ND82 737 aa5.78□□□□□ -1.48
UBE2D3-226ENST00000508635 C7orf43Q8WVR3 580 aa5.78□□□□□ -1.48
UBE2D3-226ENST00000508635 SAP130Q9H0E3 1048 aa5.78□□□□□ -1.48
UBE2D3-226ENST00000508635 QTRT2Q9H974 415 aaKnown RBP5.78□□□□□ -1.48
UBE2D3-226ENST00000508635 KLK14Q9P0G3 267 aa5.78□□□□□ -1.48
UBE2D3-226ENST00000508635 SEPT3Q9UH03 358 aa5.78□□□□□ -1.48
UBE2D3-226ENST00000508635 KDM5BQ9UGL1 1544 aa5.78□□□□□ -1.48
UBE2D3-226ENST00000508635 GOLGA3Q08378 1498 aa5.77□□□□□ -1.49
UBE2D3-226ENST00000508635 ASXL2Q76L83 1435 aa5.77□□□□□ -1.49
UBE2D3-226ENST00000508635 DCDC2BA2VCK2 349 aa5.77□□□□□ -1.49
UBE2D3-226ENST00000508635 C1QTNF9BB2RNN3 333 aa5.77□□□□□ -1.49
UBE2D3-226ENST00000508635 DGKZQ13574 1117 aa5.77□□□□□ -1.49
UBE2D3-226ENST00000508635 RTN1Q16799 776 aa5.77□□□□□ -1.49
UBE2D3-226ENST00000508635 COX20Q5RI15 118 aa5.77□□□□□ -1.49
UBE2D3-226ENST00000508635 PHLDB3Q6NSJ2 640 aa5.77□□□□□ -1.49
UBE2D3-226ENST00000508635 ABHD17AQ96GS6 310 aa5.77□□□□□ -1.49
UBE2D3-226ENST00000508635 SUSD3Q96L08 255 aa5.77□□□□□ -1.49
UBE2D3-226ENST00000508635 TRERF1Q96PN7 1200 aa5.77□□□□□ -1.49
UBE2D3-226ENST00000508635 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.77□□□□□ -1.496e-7■■■■■ 62.1
UBE2D3-226ENST00000508635 CTTNBP2Q8WZ74 1663 aa5.77□□□□□ -1.49
UBE2D3-226ENST00000508635 PLB1Q6P1J6 1458 aa5.77□□□□□ -1.49
UBE2D3-226ENST00000508635 EEA1Q15075 1411 aa5.76□□□□□ -1.49
UBE2D3-226ENST00000508635 KHNYNO15037 678 aaKnown RBP5.76□□□□□ -1.49
UBE2D3-226ENST00000508635 ATXN7O15265 892 aaPredicted RBP5.76□□□□□ -1.49
UBE2D3-226ENST00000508635 BNIP3LO60238 219 aa5.76□□□□□ -1.49
UBE2D3-226ENST00000508635 SNRPNP63162 240 aaKnown RBP5.76□□□□□ -1.49
UBE2D3-226ENST00000508635 UBAP2LQ14157 1087 aaKnown RBP5.76□□□□□ -1.49
UBE2D3-226ENST00000508635 NLRP8Q86W28 1048 aa5.76□□□□□ -1.49
UBE2D3-226ENST00000508635 LRFN2Q9ULH4 789 aa5.76□□□□□ -1.49
UBE2D3-226ENST00000508635 GLI2P10070 1586 aa5.76□□□□□ -1.49
UBE2D3-226ENST00000508635 PTCD1O75127 700 aaKnown RBP5.75□□□□□ -1.49
UBE2D3-226ENST00000508635 LBRQ14739 615 aaKnown RBP5.75□□□□□ -1.49
UBE2D3-226ENST00000508635 GRIN2CQ14957 1233 aa5.75□□□□□ -1.49
UBE2D3-226ENST00000508635 C16orf46Q6P387 395 aa5.75□□□□□ -1.49
UBE2D3-226ENST00000508635 FIGNL1Q6PIW4 674 aa5.75□□□□□ -1.49
UBE2D3-226ENST00000508635 CD163Q86VB7 1156 aa5.75□□□□□ -1.49
UBE2D3-226ENST00000508635 CEP63Q96MT8 703 aa5.75□□□□□ -1.49
UBE2D3-226ENST00000508635 ANKIB1Q9P2G1 1089 aa5.75□□□□□ -1.49
UBE2D3-226ENST00000508635 BCS1LQ9Y276 419 aa5.75□□□□□ -1.49
UBE2D3-226ENST00000508635 PCDHGC4Q9Y5F7 938 aa5.75□□□□□ -1.49
UBE2D3-226ENST00000508635 EPRSP07814 1512 aaKnown RBP5.74□□□□□ -1.49
UBE2D3-226ENST00000508635 ZCCHC11Q5TAX3 1644 aaKnown RBP5.74□□□□□ -1.49
UBE2D3-226ENST00000508635 MAPTP10636 758 aaKnown RBP5.74□□□□□ -1.49
UBE2D3-226ENST00000508635 YBX3P16989 372 aaKnown RBP eCLIP5.74□□□□□ -1.494e-8■□□□□ 8.6
UBE2D3-226ENST00000508635 PDE4CQ08493 712 aa5.74□□□□□ -1.49
UBE2D3-226ENST00000508635 C11orf91Q3C1V1 193 aa5.74□□□□□ -1.49
UBE2D3-226ENST00000508635 C1orf229Q6ZS94 237 aaPredicted RBP5.74□□□□□ -1.49
UBE2D3-226ENST00000508635 FAM9AQ8IZU1 332 aaPredicted RBP5.74□□□□□ -1.49
UBE2D3-226ENST00000508635 IFT43Q96FT9 208 aa5.74□□□□□ -1.49
UBE2D3-226ENST00000508635 MYO19Q96H55 970 aa5.74□□□□□ -1.49
UBE2D3-226ENST00000508635 ABCA8O94911 1581 aa5.74□□□□□ -1.49
UBE2D3-226ENST00000508635 ABL1P00519 1130 aa5.73□□□□□ -1.49
UBE2D3-226ENST00000508635 CD33P20138 364 aa5.73□□□□□ -1.49
UBE2D3-226ENST00000508635 MAP2K3P46734 347 aa5.73□□□□□ -1.49
UBE2D3-226ENST00000508635 CTBSQ01459 385 aa5.73□□□□□ -1.49
UBE2D3-226ENST00000508635 TNP2Q05952 138 aa5.73□□□□□ -1.49
UBE2D3-226ENST00000508635 MTMR3Q13615 1198 aa5.73□□□□□ -1.49
UBE2D3-226ENST00000508635 GTF3C2Q8WUA4 911 aaPredicted RBP5.73□□□□□ -1.49
UBE2D3-226ENST00000508635 COL26A1Q96A83 441 aa5.73□□□□□ -1.49
UBE2D3-226ENST00000508635 CFHR5Q9BXR6 569 aa5.73□□□□□ -1.49
UBE2D3-226ENST00000508635 ANO2Q9NQ90 1003 aa5.73□□□□□ -1.49
UBE2D3-226ENST00000508635 STRN4Q9NRL3 753 aa5.73□□□□□ -1.49
UBE2D3-226ENST00000508635 NDFIP2Q9NV92 336 aa5.73□□□□□ -1.49
UBE2D3-226ENST00000508635 HCN2Q9UL51 889 aa5.73□□□□□ -1.49
UBE2D3-226ENST00000508635 PHF24Q9UPV7 400 aa5.73□□□□□ -1.49
UBE2D3-226ENST00000508635 GPC6Q9Y625 555 aaPredicted RBP5.73□□□□□ -1.49
UBE2D3-226ENST00000508635 ARID1BQ8NFD5 2236 aaPredicted RBP5.72□□□□□ -1.49
UBE2D3-226ENST00000508635 SAMD9Q5K651 1589 aa5.72□□□□□ -1.49
UBE2D3-226ENST00000508635 WDR7Q9Y4E6 1490 aa5.72□□□□□ -1.49
UBE2D3-226ENST00000508635 TGFBR3LH3BV60 316 aa5.72□□□□□ -1.49
UBE2D3-226ENST00000508635 TNFRSF10BO14763 440 aa5.72□□□□□ -1.49
UBE2D3-226ENST00000508635 HOXB4P17483 251 aaPredicted RBP5.72□□□□□ -1.49
UBE2D3-226ENST00000508635 MX2P20592 715 aa5.72□□□□□ -1.49
UBE2D3-226ENST00000508635 FGFR3P22607 806 aa5.72□□□□□ -1.49
UBE2D3-226ENST00000508635 TYRO3Q06418 890 aa5.72□□□□□ -1.49
UBE2D3-226ENST00000508635 SFSWAPQ12872 951 aaKnown RBP5.72□□□□□ -1.49
UBE2D3-226ENST00000508635 DOC2BQ14184 412 aa5.72□□□□□ -1.49
UBE2D3-226ENST00000508635 HIF1AQ16665 826 aa5.72□□□□□ -1.49
UBE2D3-226ENST00000508635 FAM26DQ5JW98 314 aa5.72□□□□□ -1.49
UBE2D3-226ENST00000508635 B4GALNT3Q6L9W6 998 aa5.72□□□□□ -1.49
UBE2D3-226ENST00000508635 BTLAQ7Z6A9 289 aa5.72□□□□□ -1.49
UBE2D3-226ENST00000508635 OXCT2Q9BYC2 517 aaPredicted RBP5.72□□□□□ -1.49
UBE2D3-226ENST00000508635 RRAGCQ9HB90 399 aa5.72□□□□□ -1.49
UBE2D3-226ENST00000508635 BRD7Q9NPI1 651 aa5.72□□□□□ -1.49
UBE2D3-226ENST00000508635 NOP53Q9NZM5 478 aaKnown RBP5.72□□□□□ -1.49
UBE2D3-226ENST00000508635 ATXN7L1Q9ULK2 861 aaPredicted RBP5.72□□□□□ -1.49
UBE2D3-226ENST00000508635 USP20Q9Y2K6 914 aa5.72□□□□□ -1.49
UBE2D3-226ENST00000508635 KDM6BO15054 1643 aa5.72□□□□□ -1.49
UBE2D3-226ENST00000508635 PPRC1Q5VV67 1664 aaKnown RBP5.72□□□□□ -1.49
UBE2D3-226ENST00000508635 TSPOAP1O95153 1857 aa5.71□□□□□ -1.5
UBE2D3-226ENST00000508635 MAP3K4Q9Y6R4 1608 aa5.71□□□□□ -1.5
UBE2D3-226ENST00000508635 C2CD2LO14523 706 aa5.71□□□□□ -1.5
UBE2D3-226ENST00000508635 GNB5O14775 395 aa5.71□□□□□ -1.5
UBE2D3-226ENST00000508635 MICAL2O94851 1124 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms