RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 CCDC146Q8IYE0 955 aa10.41□□□□□ -0.74
UBE2D3-222ENST00000508238 CNKSR1Q969H4 720 aa10.41□□□□□ -0.74
UBE2D3-222ENST00000508238 MASTLQ96GX5 879 aa10.41□□□□□ -0.74
UBE2D3-222ENST00000508238 RRP7AQ9Y3A4 280 aaKnown RBP10.41□□□□□ -0.74
UBE2D3-222ENST00000508238 NUP98P52948 1817 aa10.41□□□□□ -0.74
UBE2D3-222ENST00000508238 LMNB1P20700 586 aa10.4□□□□□ -0.74
UBE2D3-222ENST00000508238 CCDC24Q8N4L8 307 aa10.4□□□□□ -0.74
UBE2D3-222ENST00000508238 ZNF526Q8TF50 670 aaPredicted RBP10.4□□□□□ -0.74
UBE2D3-222ENST00000508238 ZNF622Q969S3 477 aaKnown RBP eCLIP10.4□□□□□ -0.74
UBE2D3-222ENST00000508238 RNF181Q9P0P0 153 aa10.4□□□□□ -0.74
UBE2D3-222ENST00000508238 CEP350Q5VT06 3117 aa10.4□□□□□ -0.74
UBE2D3-222ENST00000508238 SLX4Q8IY92 1834 aa10.4□□□□□ -0.75
UBE2D3-222ENST00000508238 CCDC88AQ3V6T2 1871 aa10.39□□□□□ -0.75
UBE2D3-222ENST00000508238 NFKBIEO00221 500 aa10.39□□□□□ -0.75
UBE2D3-222ENST00000508238 NPHP1O15259 732 aa10.39□□□□□ -0.75
UBE2D3-222ENST00000508238 EVI5O60447 810 aa10.39□□□□□ -0.75
UBE2D3-222ENST00000508238 NEUROD2Q15784 382 aa10.39□□□□□ -0.75
UBE2D3-222ENST00000508238 KIF6Q6ZMV9 814 aa10.39□□□□□ -0.75
UBE2D3-222ENST00000508238 TTLL7Q6ZT98 887 aa10.39□□□□□ -0.75
UBE2D3-222ENST00000508238 ZNF34Q8IZ26 560 aa10.39□□□□□ -0.75
UBE2D3-222ENST00000508238 C7orf43Q8WVR3 580 aa10.39□□□□□ -0.75
UBE2D3-222ENST00000508238 NYXQ9GZU5 481 aa10.39□□□□□ -0.75
UBE2D3-222ENST00000508238 IBTKQ9P2D0 1353 aaPredicted RBP10.39□□□□□ -0.75
UBE2D3-222ENST00000508238 FER1L6Q2WGJ9 1857 aa10.38□□□□□ -0.75
UBE2D3-222ENST00000508238 KDM2BQ8NHM5 1336 aa10.38□□□□□ -0.75
UBE2D3-222ENST00000508238 LTBP3Q9NS15 1303 aa10.38□□□□□ -0.75
UBE2D3-222ENST00000508238 SENP3-EIF4A1A0A087X0R7 540 aa10.38□□□□□ -0.75
UBE2D3-222ENST00000508238 TOMM70O94826 608 aa10.38□□□□□ -0.75
UBE2D3-222ENST00000508238 HOXB7P09629 217 aa10.38□□□□□ -0.75
UBE2D3-222ENST00000508238 MYL6BP14649 208 aa10.38□□□□□ -0.75
UBE2D3-222ENST00000508238 NPR1P16066 1061 aa10.38□□□□□ -0.75
UBE2D3-222ENST00000508238 PRELPP51888 382 aa10.38□□□□□ -0.75
UBE2D3-222ENST00000508238 CRY2Q49AN0 593 aa10.38□□□□□ -0.75
UBE2D3-222ENST00000508238 SOGA3Q5TF21 947 aa10.38□□□□□ -0.75
UBE2D3-222ENST00000508238 PRPF40BQ6NWY9 871 aaKnown RBP10.38□□□□□ -0.75
UBE2D3-222ENST00000508238 GIGYF2Q6Y7W6 1299 aaKnown RBP10.38□□□□□ -0.75
UBE2D3-222ENST00000508238 NGEFQ8N5V2 710 aa10.38□□□□□ -0.75
UBE2D3-222ENST00000508238 PCDHGA4Q9Y5G9 962 aa10.38□□□□□ -0.75
UBE2D3-222ENST00000508238 COL11A2P13942 1736 aaPredicted RBP10.38□□□□□ -0.75
UBE2D3-222ENST00000508238 DICER1Q9UPY3 1922 aaKnown RBP10.37□□□□□ -0.75
UBE2D3-222ENST00000508238 C21orf2O43822 256 aa10.37□□□□□ -0.75
UBE2D3-222ENST00000508238 ZNF853P0CG23 659 aa10.37□□□□□ -0.75
UBE2D3-222ENST00000508238 EIF2S2P20042 333 aaKnown RBP10.37□□□□□ -0.75
UBE2D3-222ENST00000508238 RASSF7Q02833 373 aa10.37□□□□□ -0.75
UBE2D3-222ENST00000508238 NMRK2Q9NPI5 230 aa10.37□□□□□ -0.75
UBE2D3-222ENST00000508238 DDX21Q9NR30 783 aaKnown RBP eCLIP10.37□□□□□ -0.75
UBE2D3-222ENST00000508238 RIC1Q4ADV7 1423 aa10.36□□□□□ -0.75
UBE2D3-222ENST00000508238 GRXCR2A6NFK2 248 aa10.36□□□□□ -0.75
UBE2D3-222ENST00000508238 APAF1O14727 1248 aa10.36□□□□□ -0.75
UBE2D3-222ENST00000508238 HOXB3P14651 431 aaPredicted RBP10.36□□□□□ -0.75
UBE2D3-222ENST00000508238 HSPA6P17066 643 aa10.36□□□□□ -0.75
UBE2D3-222ENST00000508238 GTF2E1P29083 439 aaPredicted RBP10.36□□□□□ -0.75
UBE2D3-222ENST00000508238 ALDH1B1P30837 517 aa10.36□□□□□ -0.75
UBE2D3-222ENST00000508238 HOXA10P31260 410 aaPredicted RBP10.36□□□□□ -0.75
UBE2D3-222ENST00000508238 CALD1Q05682 793 aaKnown RBP10.36□□□□□ -0.75
UBE2D3-222ENST00000508238 DOK7Q18PE1 504 aa10.36□□□□□ -0.75
UBE2D3-222ENST00000508238 PROSER3Q2NL68 480 aa10.36□□□□□ -0.75
UBE2D3-222ENST00000508238 PARP10Q53GL7 1025 aa10.36□□□□□ -0.75
UBE2D3-222ENST00000508238 TAOK3Q9H2K8 898 aa10.36□□□□□ -0.75
UBE2D3-222ENST00000508238 ZBTB3Q9H5J0 574 aa10.36□□□□□ -0.75
UBE2D3-222ENST00000508238 ARFGEF2Q9Y6D5 1785 aa10.36□□□□□ -0.75
UBE2D3-222ENST00000508238 UBN2Q6ZU65 1347 aa10.35□□□□□ -0.75
UBE2D3-222ENST00000508238 ZNF316A6NFI3 1004 aaPredicted RBP10.35□□□□□ -0.75
UBE2D3-222ENST00000508238 GLTPD2A6NH11 291 aa10.35□□□□□ -0.75
UBE2D3-222ENST00000508238 SLC10A5Q5PT55 438 aa10.35□□□□□ -0.75
UBE2D3-222ENST00000508238 SUSD4Q5VX71 490 aa10.35□□□□□ -0.75
UBE2D3-222ENST00000508238 COPS6Q7L5N1 327 aa10.35□□□□□ -0.75
UBE2D3-222ENST00000508238 CDAN1Q8IWY9 1227 aa10.35□□□□□ -0.75
UBE2D3-222ENST00000508238 RBM46Q8TBY0 533 aaKnown RBP10.35□□□□□ -0.75
UBE2D3-222ENST00000508238 IFT57Q9NWB7 429 aa10.35□□□□□ -0.75
UBE2D3-222ENST00000508238 RNF123Q5XPI4 1314 aa10.34□□□□□ -0.75
UBE2D3-222ENST00000508238 FAM177BA6PVY3 158 aa10.34□□□□□ -0.75
UBE2D3-222ENST00000508238 NTSR2O95665 410 aa10.34□□□□□ -0.75
UBE2D3-222ENST00000508238 GPTP24298 496 aa10.34□□□□□ -0.75
UBE2D3-222ENST00000508238 GNAI1P63096 354 aa10.34□□□□□ -0.75
UBE2D3-222ENST00000508238 KRT24Q2M2I5 525 aa10.34□□□□□ -0.75
UBE2D3-222ENST00000508238 ERFEQ4G0M1 354 aa10.34□□□□□ -0.75
UBE2D3-222ENST00000508238 HSP90AB3PQ58FF7 597 aa10.34□□□□□ -0.75
UBE2D3-222ENST00000508238 PPP1R42Q7Z4L9 355 aa10.34□□□□□ -0.75
UBE2D3-222ENST00000508238 NUTM1Q86Y26 1132 aa10.34□□□□□ -0.75
UBE2D3-222ENST00000508238 RTKN2Q8IZC4 609 aa10.34□□□□□ -0.75
UBE2D3-222ENST00000508238 DDX12PQ92771 950 aa10.34□□□□□ -0.75
UBE2D3-222ENST00000508238 MBIPQ9NS73 344 aa10.34□□□□□ -0.75
UBE2D3-222ENST00000508238 DBF4Q9UBU7 674 aaPredicted RBP10.34□□□□□ -0.75
UBE2D3-222ENST00000508238 LAS1LQ9Y4W2 734 aaKnown RBP10.34□□□□□ -0.75
UBE2D3-222ENST00000508238 ANXA1P04083 346 aa10.33□□□□□ -0.76
UBE2D3-222ENST00000508238 TCIRG1Q13488 830 aa10.33□□□□□ -0.76
UBE2D3-222ENST00000508238 CCDC27Q2M243 656 aa10.33□□□□□ -0.76
UBE2D3-222ENST00000508238 GRIPAP1Q4V328 841 aa10.33□□□□□ -0.76
UBE2D3-222ENST00000508238 CCDC184Q52MB2 194 aa10.33□□□□□ -0.76
UBE2D3-222ENST00000508238 CCDC93Q567U6 631 aa10.33□□□□□ -0.76
UBE2D3-222ENST00000508238 RBM26Q5T8P6 1007 aaKnown RBP10.33□□□□□ -0.76
UBE2D3-222ENST00000508238 HDGFL1Q5TGJ6 251 aa10.33□□□□□ -0.76
UBE2D3-222ENST00000508238 DUSP27Q5VZP5 1158 aa10.33□□□□□ -0.76
UBE2D3-222ENST00000508238 CC2D2BQ6DHV5 1058 aa10.33□□□□□ -0.76
UBE2D3-222ENST00000508238 XAGE3Q8WTP9 111 aa10.33□□□□□ -0.76
UBE2D3-222ENST00000508238 CRAMP1Q96RY5 1269 aa10.33□□□□□ -0.76
UBE2D3-222ENST00000508238 UTP14AQ9BVJ6 771 aaKnown RBP10.33□□□□□ -0.76
UBE2D3-222ENST00000508238 RRAGCQ9HB90 399 aa10.33□□□□□ -0.76
UBE2D3-222ENST00000508238 HYPKQ9NX55 129 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms