RNA–Protein interactions for RNA: ENST00000508071.1

CLDND1-217, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 556 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-217ENST00000508071 KIAA2012Q0VF49 1180 aa23.61■■□□□ 1.37
CLDND1-217ENST00000508071 TNIP1Q15025 636 aa23.61■■□□□ 1.37
CLDND1-217ENST00000508071 DDX46Q7L014 1031 aaKnown RBP23.61■■□□□ 1.37
CLDND1-217ENST00000508071 RIPK4P57078 832 aa23.6■■□□□ 1.37
CLDND1-217ENST00000508071 SAPCD2Q86UD0 394 aa23.6■■□□□ 1.37
CLDND1-217ENST00000508071 GLIS2Q9BZE0 524 aaPredicted RBP23.6■■□□□ 1.37
CLDND1-217ENST00000508071 BABAM1Q9NWV8 329 aa23.6■■□□□ 1.37
CLDND1-217ENST00000508071 CCDC85CA6NKD9 419 aa23.59■■□□□ 1.37
CLDND1-217ENST00000508071 RAD17O75943 681 aa23.59■■□□□ 1.37
CLDND1-217ENST00000508071 AIMP1Q12904 312 aaKnown RBP23.59■■□□□ 1.37
CLDND1-217ENST00000508071 FAM161AQ3B820 660 aa23.59■■□□□ 1.37
CLDND1-217ENST00000508071 COPS6Q7L5N1 327 aa23.59■■□□□ 1.37
CLDND1-217ENST00000508071 NLRP10Q86W26 655 aa23.59■■□□□ 1.37
CLDND1-217ENST00000508071 ZC3H15Q8WU90 426 aaKnown RBP23.59■■□□□ 1.37
CLDND1-217ENST00000508071 PGAP2Q9UHJ9 254 aa23.59■■□□□ 1.37
CLDND1-217ENST00000508071 TRMT112Q9UI30 125 aaKnown RBP23.59■■□□□ 1.37
CLDND1-217ENST00000508071 TSKSQ9UJT2 592 aa23.59■■□□□ 1.37
CLDND1-217ENST00000508071 GRAPQ13588 217 aa23.58■■□□□ 1.37
CLDND1-217ENST00000508071 GRAPLQ8TC17 118 aaPredicted RBP23.58■■□□□ 1.37
CLDND1-217ENST00000508071 XAGE3Q8WTP9 111 aa23.58■■□□□ 1.37
CLDND1-217ENST00000508071 NECTIN2Q92692 538 aa23.58■■□□□ 1.37
CLDND1-217ENST00000508071 HHIPL1Q96JK4 782 aa23.58■■□□□ 1.37
CLDND1-217ENST00000508071 ZNF408Q9H9D4 720 aa23.58■■□□□ 1.37
CLDND1-217ENST00000508071 CA12O43570 354 aa23.57■■□□□ 1.36
CLDND1-217ENST00000508071 LMOD3Q0VAK6 560 aa23.57■■□□□ 1.36
CLDND1-217ENST00000508071 TCIRG1Q13488 830 aa23.57■■□□□ 1.36
CLDND1-217ENST00000508071 SH3TC1Q8TE82 1336 aa23.57■■□□□ 1.36
CLDND1-217ENST00000508071 TAF1P21675 1872 aa23.56■■□□□ 1.36
CLDND1-217ENST00000508071 CDC37L1Q7L3B6 337 aa23.56■■□□□ 1.36
CLDND1-217ENST00000508071 TMC4Q7Z404 712 aa23.56■■□□□ 1.36
CLDND1-217ENST00000508071 H7C1D1 291 aa23.55■■□□□ 1.36
CLDND1-217ENST00000508071 HIRAP54198 1017 aaPredicted RBP23.55■■□□□ 1.36
CLDND1-217ENST00000508071 TRPM4Q8TD43 1214 aa23.55■■□□□ 1.36
CLDND1-217ENST00000508071 CNOT7Q9UIV1 285 aaKnown RBP23.55■■□□□ 1.36
CLDND1-217ENST00000508071 BRPF1P55201 1214 aaPredicted RBP23.54■■□□□ 1.36
CLDND1-217ENST00000508071 CASP8AP2Q9UKL3 1982 aa23.53■■□□□ 1.36
CLDND1-217ENST00000508071 YDJCA8MPS7 323 aa23.52■■□□□ 1.36
CLDND1-217ENST00000508071 TMPOP42166 694 aaKnown RBP23.52■■□□□ 1.36
CLDND1-217ENST00000508071 MLLT1Q03111 559 aaPredicted RBP23.52■■□□□ 1.36
CLDND1-217ENST00000508071 MICALL2Q8IY33 904 aa23.52■■□□□ 1.36
CLDND1-217ENST00000508071 LRRC37AA6NMS7 1700 aa23.51■■□□□ 1.35
CLDND1-217ENST00000508071 DUOX1Q9NRD9 1551 aa23.51■■□□□ 1.35
CLDND1-217ENST00000508071 SHTN1A0MZ66 631 aa23.5■■□□□ 1.35
CLDND1-217ENST00000508071 WASHC4Q2M389 1173 aa23.5■■□□□ 1.35
CLDND1-217ENST00000508071 USP48Q86UV5 1035 aa23.5■■□□□ 1.35
CLDND1-217ENST00000508071 ZNF428Q96B54 188 aa23.5■■□□□ 1.35
CLDND1-217ENST00000508071 DDX60Q8IY21 1712 aaKnown RBP23.5■■□□□ 1.35
CLDND1-217ENST00000508071 DPF2Q92785 391 aa23.49■■□□□ 1.35
CLDND1-217ENST00000508071 ZBTB12Q9Y330 459 aaPredicted RBP23.49■■□□□ 1.35
CLDND1-217ENST00000508071 PSMD14O00487 310 aa23.48■■□□□ 1.35
CLDND1-217ENST00000508071 RGS19P49795 217 aa23.48■■□□□ 1.35
CLDND1-217ENST00000508071 HUNKP57058 714 aa23.48■■□□□ 1.35
CLDND1-217ENST00000508071 NOGQ13253 232 aa23.48■■□□□ 1.35
CLDND1-217ENST00000508071 MCOLN1Q9GZU1 580 aa23.48■■□□□ 1.35
CLDND1-217ENST00000508071 DBNDD1Q9H9R9 158 aa23.48■■□□□ 1.35
CLDND1-217ENST00000508071 CHPF2Q9P2E5 772 aa23.48■■□□□ 1.35
CLDND1-217ENST00000508071 NSFL1CQ9UNZ2 370 aaKnown RBP23.48■■□□□ 1.35
CLDND1-217ENST00000508071 NEUROD2Q15784 382 aa23.47■■□□□ 1.35
CLDND1-217ENST00000508071 KRT24Q2M2I5 525 aa23.47■■□□□ 1.35
CLDND1-217ENST00000508071 SAMD7Q7Z3H4 446 aa23.47■■□□□ 1.35
CLDND1-217ENST00000508071 PLBD2Q8NHP8 589 aa23.47■■□□□ 1.35
CLDND1-217ENST00000508071 CFAP44Q96MT7 982 aa23.47■■□□□ 1.35
CLDND1-217ENST00000508071 LAS1LQ9Y4W2 734 aaKnown RBP23.47■■□□□ 1.35
CLDND1-217ENST00000508071 POLR2AP24928 1970 aaKnown RBP23.47■■□□□ 1.35
CLDND1-217ENST00000508071 C6orf229H3BNL8 230 aa23.46■■□□□ 1.35
CLDND1-217ENST00000508071 CHL1O00533 1208 aa23.46■■□□□ 1.35
CLDND1-217ENST00000508071 RIMBP2O15034 1052 aa23.46■■□□□ 1.35
CLDND1-217ENST00000508071 ANKRD13DQ6ZTN6 518 aa23.46■■□□□ 1.35
CLDND1-217ENST00000508071 RALBP1Q15311 655 aa23.45■■□□□ 1.34
CLDND1-217ENST00000508071 SF3B3Q15393 1217 aaKnown RBP23.45■■□□□ 1.34
CLDND1-217ENST00000508071 TBC1D10BQ4KMP7 808 aaPredicted RBP23.45■■□□□ 1.34
CLDND1-217ENST00000508071 HDGFL1Q5TGJ6 251 aa23.45■■□□□ 1.34
CLDND1-217ENST00000508071 KRT26Q7Z3Y9 468 aa23.45■■□□□ 1.34
CLDND1-217ENST00000508071 CELF1Q92879 486 aaKnown RBP23.45■■□□□ 1.34
CLDND1-217ENST00000508071 FAM89AQ96GI7 184 aa23.45■■□□□ 1.34
CLDND1-217ENST00000508071 ATP5J2-PTCD1G3V325 749 aa23.44■■□□□ 1.34
CLDND1-217ENST00000508071 SLC34A2O95436 690 aa23.44■■□□□ 1.34
CLDND1-217ENST00000508071 RPS12P25398 132 aaKnown RBP23.44■■□□□ 1.34
CLDND1-217ENST00000508071 DGKZQ13574 1117 aa23.44■■□□□ 1.34
CLDND1-217ENST00000508071 EYA3Q99504 573 aa23.44■■□□□ 1.34
CLDND1-217ENST00000508071 ISCA1Q9BUE6 129 aa23.44■■□□□ 1.34
CLDND1-217ENST00000508071 POLLQ9UGP5 575 aa23.44■■□□□ 1.34
CLDND1-217ENST00000508071 ECE2O60344 883 aa23.43■■□□□ 1.34
CLDND1-217ENST00000508071 GPSM2P81274 684 aa23.43■■□□□ 1.34
CLDND1-217ENST00000508071 DLK2Q6UY11 383 aa23.43■■□□□ 1.34
CLDND1-217ENST00000508071 CCDC146Q8IYE0 955 aa23.43■■□□□ 1.34
CLDND1-217ENST00000508071 DCPSQ96C86 337 aaKnown RBP23.43■■□□□ 1.34
CLDND1-217ENST00000508071 ZIC5Q96T25 663 aa23.43■■□□□ 1.34
CLDND1-217ENST00000508071 DBF4Q9UBU7 674 aaPredicted RBP23.43■■□□□ 1.34
CLDND1-217ENST00000508071 HOXB7P09629 217 aa23.42■■□□□ 1.34
CLDND1-217ENST00000508071 RBM26Q5T8P6 1007 aaKnown RBP23.42■■□□□ 1.34
CLDND1-217ENST00000508071 RGMBQ6NW40 437 aa23.42■■□□□ 1.34
CLDND1-217ENST00000508071 C2orf69Q8N8R5 385 aa23.42■■□□□ 1.34
CLDND1-217ENST00000508071 GBA2Q9HCG7 927 aaPredicted RBP23.42■■□□□ 1.34
CLDND1-217ENST00000508071 EGFRP00533 1210 aa23.41■■□□□ 1.34
CLDND1-217ENST00000508071 DOK7Q18PE1 504 aa23.41■■□□□ 1.34
CLDND1-217ENST00000508071 RTL5Q5HYW3 569 aaPredicted RBP23.4■■□□□ 1.34
CLDND1-217ENST00000508071 ADM5C9JUS6 153 aa23.39■■□□□ 1.33
CLDND1-217ENST00000508071 IRS4O14654 1257 aaPredicted RBP23.39■■□□□ 1.33
CLDND1-217ENST00000508071 RPS8P62241 208 aaKnown RBP23.39■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms