RNA–Protein interactions for RNA: ENST00000504012.1

LINC01340-201, Transcript of long intergenic non-protein coding RNA 1340, humanhuman

TSL 3 BASIC

Gene LINC01340, Length 724 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01340-201ENST00000504012 PDCD2Q16342 344 aaPredicted RBP6.93□□□□□ -1.3
LINC01340-201ENST00000504012 AP1ARQ63HQ0 302 aa6.93□□□□□ -1.3
LINC01340-201ENST00000504012 SPTY2D1Q68D10 685 aaPredicted RBP6.93□□□□□ -1.3
LINC01340-201ENST00000504012 GIMAP6Q6P9H5 292 aa6.93□□□□□ -1.3
LINC01340-201ENST00000504012 CCDC50Q8IVM0 306 aa6.93□□□□□ -1.3
LINC01340-201ENST00000504012 SSH1Q8WYL5 1049 aa6.93□□□□□ -1.3
LINC01340-201ENST00000504012 CABS1Q96KC9 395 aa6.93□□□□□ -1.3
LINC01340-201ENST00000504012 TRIM6Q9C030 488 aaPredicted RBP6.93□□□□□ -1.3
LINC01340-201ENST00000504012 GBP3Q9H0R5 595 aa6.93□□□□□ -1.3
LINC01340-201ENST00000504012 NUP62CLQ9H1M0 184 aa6.93□□□□□ -1.3
LINC01340-201ENST00000504012 VIPAS39Q9H9C1 493 aa6.93□□□□□ -1.3
LINC01340-201ENST00000504012 ZCCHC17Q9NP64 241 aaKnown RBP6.93□□□□□ -1.3
LINC01340-201ENST00000504012 BATF3Q9NR55 127 aa6.93□□□□□ -1.3
LINC01340-201ENST00000504012 WDR70Q9NW82 654 aa6.93□□□□□ -1.3
LINC01340-201ENST00000504012 STK26Q9P289 416 aa6.93□□□□□ -1.3
LINC01340-201ENST00000504012 NRBP1Q9UHY1 535 aa6.93□□□□□ -1.3
LINC01340-201ENST00000504012 KDRP35968 1356 aa6.93□□□□□ -1.3
LINC01340-201ENST00000504012 MSH6P52701 1360 aa6.93□□□□□ -1.3
LINC01340-201ENST00000504012 YTHDC2Q9H6S0 1430 aaKnown RBP6.93□□□□□ -1.3
LINC01340-201ENST00000504012 A2MP01023 1474 aa6.92□□□□□ -1.3
LINC01340-201ENST00000504012 A0A1B0GUA9 196 aa6.92□□□□□ -1.3
LINC01340-201ENST00000504012 GOLGA6L9A6NEM1 432 aa6.92□□□□□ -1.3
LINC01340-201ENST00000504012 CCDC69A6NI79 296 aa6.92□□□□□ -1.3
LINC01340-201ENST00000504012 ERLIN1O75477 346 aa6.92□□□□□ -1.3
LINC01340-201ENST00000504012 F13A1P00488 732 aa6.92□□□□□ -1.3
LINC01340-201ENST00000504012 CHMLP26374 656 aa6.92□□□□□ -1.3
LINC01340-201ENST00000504012 ARID4AP29374 1257 aaPredicted RBP6.92□□□□□ -1.3
LINC01340-201ENST00000504012 RDXP35241 583 aaKnown RBP6.92□□□□□ -1.3
LINC01340-201ENST00000504012 SLC8A3P57103 927 aa6.92□□□□□ -1.3
LINC01340-201ENST00000504012 PSME1Q06323 249 aa6.92□□□□□ -1.3
LINC01340-201ENST00000504012 MKRN3Q13064 507 aaKnown RBP6.92□□□□□ -1.3
LINC01340-201ENST00000504012 OS9Q13438 667 aaPredicted RBP6.92□□□□□ -1.3
LINC01340-201ENST00000504012 ISM2Q6H9L7 571 aa6.92□□□□□ -1.3
LINC01340-201ENST00000504012 BRAPQ7Z569 592 aa6.92□□□□□ -1.3
LINC01340-201ENST00000504012 TMTC2Q8N394 836 aa6.92□□□□□ -1.3
LINC01340-201ENST00000504012 KLHL23Q8NBE8 558 aa6.92□□□□□ -1.3
LINC01340-201ENST00000504012 CTCFLQ8NI51 663 aaPredicted RBP6.92□□□□□ -1.3
LINC01340-201ENST00000504012 CCDC26Q8TAB7 109 aa6.92□□□□□ -1.3
LINC01340-201ENST00000504012 FAM212AQ96EL1 285 aa6.92□□□□□ -1.3
LINC01340-201ENST00000504012 XAGE2Q96GT9 111 aa6.92□□□□□ -1.3
LINC01340-201ENST00000504012 CALR3Q96L12 384 aaKnown RBP6.92□□□□□ -1.3
LINC01340-201ENST00000504012 CLSTN2Q9H4D0 955 aa6.92□□□□□ -1.3
LINC01340-201ENST00000504012 IGSF5Q9NSI5 407 aa6.92□□□□□ -1.3
LINC01340-201ENST00000504012 PDRG1Q9NUG6 133 aa6.92□□□□□ -1.3
LINC01340-201ENST00000504012 SPATS2LQ9NUQ6 558 aaKnown RBP6.92□□□□□ -1.3
LINC01340-201ENST00000504012 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.92□□□□□ -1.3
LINC01340-201ENST00000504012 RAB21Q9UL25 225 aa6.92□□□□□ -1.3
LINC01340-201ENST00000504012 NOB1Q9ULX3 412 aaKnown RBP6.92□□□□□ -1.3
LINC01340-201ENST00000504012 MYOM1P52179 1685 aa6.92□□□□□ -1.3
LINC01340-201ENST00000504012 ZC3H4Q9UPT8 1303 aaKnown RBP6.92□□□□□ -1.3
LINC01340-201ENST00000504012 STX6O43752 255 aa6.91□□□□□ -1.3
LINC01340-201ENST00000504012 SHOX2O60902 331 aaPredicted RBP6.91□□□□□ -1.3
LINC01340-201ENST00000504012 FSBPO95073 299 aa6.91□□□□□ -1.3
LINC01340-201ENST00000504012 SETSIPP0DME0 302 aa6.91□□□□□ -1.3
LINC01340-201ENST00000504012 NF2P35240 595 aa6.91□□□□□ -1.3
LINC01340-201ENST00000504012 TXLNAP40222 546 aa6.91□□□□□ -1.3
LINC01340-201ENST00000504012 ZNF165P49910 485 aa6.91□□□□□ -1.3
LINC01340-201ENST00000504012 EVCP57679 992 aa6.91□□□□□ -1.3
LINC01340-201ENST00000504012 MAP3K9P80192 1104 aa6.91□□□□□ -1.3
LINC01340-201ENST00000504012 SCRN1Q12765 414 aa6.91□□□□□ -1.3
LINC01340-201ENST00000504012 IQCB1Q15051 598 aa6.91□□□□□ -1.3
LINC01340-201ENST00000504012 PLCB4Q15147 1175 aa6.91□□□□□ -1.3
LINC01340-201ENST00000504012 RBBP5Q15291 538 aaKnown RBP6.91□□□□□ -1.3
LINC01340-201ENST00000504012 LONRF2Q1L5Z9 754 aa6.91□□□□□ -1.3
LINC01340-201ENST00000504012 SLC5A9Q2M3M2 681 aa6.91□□□□□ -1.3
LINC01340-201ENST00000504012 CCDC144BQ3MJ40 725 aa6.91□□□□□ -1.3
LINC01340-201ENST00000504012 GORABQ5T7V8 394 aa6.91□□□□□ -1.3
LINC01340-201ENST00000504012 WWC2Q6AWC2 1192 aa6.91□□□□□ -1.3
LINC01340-201ENST00000504012 RCSD1Q6JBY9 416 aa6.91□□□□□ -1.3
LINC01340-201ENST00000504012 KIAA1328Q86T90 577 aa6.91□□□□□ -1.3
LINC01340-201ENST00000504012 CCDC144CPQ8IYA2 1237 aa6.91□□□□□ -1.3
LINC01340-201ENST00000504012 PPP1R13BQ96KQ4 1090 aa6.91□□□□□ -1.3
LINC01340-201ENST00000504012 GGA2Q9UJY4 613 aa6.91□□□□□ -1.3
LINC01340-201ENST00000504012 CNPY2Q9Y2B0 182 aa6.91□□□□□ -1.3
LINC01340-201ENST00000504012 PTCH1Q13635 1447 aa6.91□□□□□ -1.3
LINC01340-201ENST00000504012 ADGRL3Q9HAR2 1447 aa6.91□□□□□ -1.3
LINC01340-201ENST00000504012 CDK13Q14004 1512 aaKnown RBP6.91□□□□□ -1.3
LINC01340-201ENST00000504012 USP27XA6NNY8 438 aa6.9□□□□□ -1.3
LINC01340-201ENST00000504012 GOLGA6L19H0YKK7 550 aa6.9□□□□□ -1.3
LINC01340-201ENST00000504012 H3BQF6 201 aa6.9□□□□□ -1.3
LINC01340-201ENST00000504012 SDSP20132 328 aa6.9□□□□□ -1.3
LINC01340-201ENST00000504012 MAGEA8P43361 318 aa6.9□□□□□ -1.3
LINC01340-201ENST00000504012 AARSP49588 968 aaKnown RBP eCLIP6.9□□□□□ -1.3
LINC01340-201ENST00000504012 GNAI1P63096 354 aa6.9□□□□□ -1.3
LINC01340-201ENST00000504012 TBC1D8BQ0IIM8 1120 aa6.9□□□□□ -1.3
LINC01340-201ENST00000504012 ANO6Q4KMQ2 910 aa6.9□□□□□ -1.3
LINC01340-201ENST00000504012 VPS53Q5VIR6 699 aa6.9□□□□□ -1.3
LINC01340-201ENST00000504012 E4F1Q66K89 784 aaPredicted RBP6.9□□□□□ -1.3
LINC01340-201ENST00000504012 KCNV1Q6PIU1 500 aa6.9□□□□□ -1.3
LINC01340-201ENST00000504012 B4GALNT4Q76KP1 1039 aa6.9□□□□□ -1.3
LINC01340-201ENST00000504012 YTHDF3Q7Z739 585 aaKnown RBP6.9□□□□□ -1.3
LINC01340-201ENST00000504012 LUZP1Q86V48 1076 aa6.9□□□□□ -1.3
LINC01340-201ENST00000504012 TAX1BP1Q86VP1 789 aa6.9□□□□□ -1.3
LINC01340-201ENST00000504012 RPAP2Q8IXW5 612 aaPredicted RBP6.9□□□□□ -1.3
LINC01340-201ENST00000504012 MAB21L3Q8N8X9 362 aa6.9□□□□□ -1.3
LINC01340-201ENST00000504012 MSANTD4Q8NCY6 345 aa6.9□□□□□ -1.3
LINC01340-201ENST00000504012 ZNF483Q8TF39 744 aaPredicted RBP6.9□□□□□ -1.3
LINC01340-201ENST00000504012 GOLGA1Q92805 767 aa6.9□□□□□ -1.3
LINC01340-201ENST00000504012 CFAP53Q96M91 514 aa6.9□□□□□ -1.3
LINC01340-201ENST00000504012 BAG1Q99933 345 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms