RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 SMARCA5O60264 1052 aaPredicted RBP9.98□□□□□ -0.81
TOPBP1-202ENST00000503338 PHF14O94880 888 aa9.98□□□□□ -0.81
TOPBP1-202ENST00000503338 IFIT2P09913 472 aaKnown RBP9.98□□□□□ -0.81
TOPBP1-202ENST00000503338 PDE1AP54750 535 aa9.98□□□□□ -0.81
TOPBP1-202ENST00000503338 SLC10A5Q5PT55 438 aa9.98□□□□□ -0.81
TOPBP1-202ENST00000503338 TTC22Q5TAA0 569 aa9.98□□□□□ -0.81
TOPBP1-202ENST00000503338 TBC1D9BQ66K14 1250 aa9.98□□□□□ -0.81
TOPBP1-202ENST00000503338 NBPF5PQ86XG9 351 aaPredicted RBP9.98□□□□□ -0.81
TOPBP1-202ENST00000503338 AKT1S1Q96B36 256 aa9.98□□□□□ -0.81
TOPBP1-202ENST00000503338 TSHZ2Q9NRE2 1034 aa9.98□□□□□ -0.81
TOPBP1-202ENST00000503338 TFCP2L1Q9NZI6 479 aa9.98□□□□□ -0.81
TOPBP1-202ENST00000503338 CARMIL3Q8ND23 1372 aa9.98□□□□□ -0.81
TOPBP1-202ENST00000503338 ITGA6P23229 1130 aa9.97□□□□□ -0.81
TOPBP1-202ENST00000503338 C8orf34Q49A92 452 aa9.97□□□□□ -0.81
TOPBP1-202ENST00000503338 CASC1Q6TDU7 716 aa9.97□□□□□ -0.81
TOPBP1-202ENST00000503338 CDC5LQ99459 802 aaKnown RBP9.97□□□□□ -0.81
TOPBP1-202ENST00000503338 SIL1Q9H173 461 aa9.97□□□□□ -0.81
TOPBP1-202ENST00000503338 IL1RAPL2Q9NP60 686 aa9.97□□□□□ -0.81
TOPBP1-202ENST00000503338 CEP126Q9P2H0 1117 aa9.97□□□□□ -0.81
TOPBP1-202ENST00000503338 SRP68Q9UHB9 627 aaKnown RBP9.97□□□□□ -0.81
TOPBP1-202ENST00000503338 AKAP2Q9Y2D5 859 aa9.97□□□□□ -0.81
TOPBP1-202ENST00000503338 SALL3Q9BXA9 1300 aa9.97□□□□□ -0.81
TOPBP1-202ENST00000503338 NPHP1O15259 732 aa9.96□□□□□ -0.82
TOPBP1-202ENST00000503338 GLRX3O76003 335 aaKnown RBP9.96□□□□□ -0.82
TOPBP1-202ENST00000503338 SASH1O94885 1247 aa9.96□□□□□ -0.82
TOPBP1-202ENST00000503338 GYS1P13807 737 aa9.96□□□□□ -0.82
TOPBP1-202ENST00000503338 SF3B3Q15393 1217 aaKnown RBP9.96□□□□□ -0.82
TOPBP1-202ENST00000503338 AACSQ86V21 672 aa9.96□□□□□ -0.82
TOPBP1-202ENST00000503338 C16orf71Q8IYS4 520 aaPredicted RBP9.96□□□□□ -0.82
TOPBP1-202ENST00000503338 NLGN1Q8N2Q7 840 aa9.96□□□□□ -0.82
TOPBP1-202ENST00000503338 NLRP3Q96P20 1036 aa9.96□□□□□ -0.82
TOPBP1-202ENST00000503338 CAMKK2Q96RR4 588 aa9.96□□□□□ -0.82
TOPBP1-202ENST00000503338 UPF2Q9HAU5 1272 aaKnown RBP9.96□□□□□ -0.82
TOPBP1-202ENST00000503338 TNS1Q9HBL0 1735 aaKnown RBP9.96□□□□□ -0.82
TOPBP1-202ENST00000503338 UBR3Q6ZT12 1888 aa9.96□□□□□ -0.82
TOPBP1-202ENST00000503338 FAM177BA6PVY3 158 aa9.95□□□□□ -0.82
TOPBP1-202ENST00000503338 HCLS1P14317 486 aaPredicted RBP9.95□□□□□ -0.82
TOPBP1-202ENST00000503338 IGHMBP2P38935 993 aaKnown RBP9.95□□□□□ -0.82
TOPBP1-202ENST00000503338 LDHAL6AQ6ZMR3 332 aa9.95□□□□□ -0.82
TOPBP1-202ENST00000503338 BICDL1Q6ZP65 573 aa9.95□□□□□ -0.82
TOPBP1-202ENST00000503338 MPHOSPH8Q99549 860 aa9.95□□□□□ -0.82
TOPBP1-202ENST00000503338 GREM2Q9H772 168 aa9.95□□□□□ -0.82
TOPBP1-202ENST00000503338 ECHDC1Q9NTX5 307 aa9.95□□□□□ -0.82
TOPBP1-202ENST00000503338 STK32BQ9NY57 414 aa9.95□□□□□ -0.82
TOPBP1-202ENST00000503338 MROH5Q6ZUA9 1318 aa9.95□□□□□ -0.82
TOPBP1-202ENST00000503338 RIC1Q4ADV7 1423 aa9.95□□□□□ -0.82
TOPBP1-202ENST00000503338 MYH3P11055 1940 aa9.94□□□□□ -0.82
TOPBP1-202ENST00000503338 C4AP0C0L4 1744 aa9.94□□□□□ -0.82
TOPBP1-202ENST00000503338 COL24A1Q17RW2 1714 aa9.94□□□□□ -0.82
TOPBP1-202ENST00000503338 CDC45O75419 566 aa9.94□□□□□ -0.82
TOPBP1-202ENST00000503338 ST5P78524 1137 aa9.94□□□□□ -0.82
TOPBP1-202ENST00000503338 TFCP2Q12800 502 aa9.94□□□□□ -0.82
TOPBP1-202ENST00000503338 NFIXQ14938 502 aa9.94□□□□□ -0.82
TOPBP1-202ENST00000503338 ERFEQ4G0M1 354 aa9.94□□□□□ -0.82
TOPBP1-202ENST00000503338 TNNI3KQ59H18 835 aa9.94□□□□□ -0.82
TOPBP1-202ENST00000503338 ATG9AQ7Z3C6 839 aa9.94□□□□□ -0.82
TOPBP1-202ENST00000503338 AMIGO3Q86WK7 504 aa9.94□□□□□ -0.82
TOPBP1-202ENST00000503338 NUTM1Q86Y26 1132 aa9.94□□□□□ -0.82
TOPBP1-202ENST00000503338 SYNE4Q8N205 404 aa9.94□□□□□ -0.82
TOPBP1-202ENST00000503338 CNBD1Q8NA66 436 aa9.94□□□□□ -0.82
TOPBP1-202ENST00000503338 KLHDC4Q8TBB5 520 aa9.94□□□□□ -0.82
TOPBP1-202ENST00000503338 CNNM1Q9NRU3 951 aa9.94□□□□□ -0.82
TOPBP1-202ENST00000503338 FPGT-TNNI3KV9GXZ4 949 aa9.94□□□□□ -0.82
TOPBP1-202ENST00000503338 LAMB2P55268 1798 aa9.93□□□□□ -0.82
TOPBP1-202ENST00000503338 GSPT1P15170 499 aaKnown RBP9.93□□□□□ -0.82
TOPBP1-202ENST00000503338 TM4SF1P30408 202 aa9.93□□□□□ -0.82
TOPBP1-202ENST00000503338 ZNF827Q17R98 1081 aa9.93□□□□□ -0.82
TOPBP1-202ENST00000503338 METTL24Q5JXM2 366 aa9.93□□□□□ -0.82
TOPBP1-202ENST00000503338 TICAM2Q86XR7 235 aa9.93□□□□□ -0.82
TOPBP1-202ENST00000503338 ANKRD18AQ8IVF6 992 aa9.93□□□□□ -0.82
TOPBP1-202ENST00000503338 CNTROBQ8N137 903 aa9.93□□□□□ -0.82
TOPBP1-202ENST00000503338 OTUD7AQ8TE49 926 aaPredicted RBP9.93□□□□□ -0.82
TOPBP1-202ENST00000503338 EAF2Q96CJ1 260 aaPredicted RBP9.93□□□□□ -0.82
TOPBP1-202ENST00000503338 BCL11AQ9H165 835 aa9.93□□□□□ -0.82
TOPBP1-202ENST00000503338 RIPOR2Q9Y4F9 1068 aa9.93□□□□□ -0.82
TOPBP1-202ENST00000503338 ABCC12Q96J65 1359 aa9.92□□□□□ -0.82
TOPBP1-202ENST00000503338 SERPINB2P05120 415 aa9.92□□□□□ -0.82
TOPBP1-202ENST00000503338 SDSP20132 328 aa9.92□□□□□ -0.82
TOPBP1-202ENST00000503338 EN1Q05925 392 aaPredicted RBP9.92□□□□□ -0.82
TOPBP1-202ENST00000503338 EZH2Q15910 746 aaKnown RBP9.92□□□□□ -0.82
TOPBP1-202ENST00000503338 SLC15A2Q16348 729 aa9.92□□□□□ -0.82
TOPBP1-202ENST00000503338 LRRC24Q50LG9 513 aa9.92□□□□□ -0.82
TOPBP1-202ENST00000503338 DDX46Q7L014 1031 aaKnown RBP9.92□□□□□ -0.82
TOPBP1-202ENST00000503338 ILDR1Q86SU0 546 aaPredicted RBP9.92□□□□□ -0.82
TOPBP1-202ENST00000503338 COL23A1Q86Y22 540 aaPredicted RBP9.92□□□□□ -0.82
TOPBP1-202ENST00000503338 PI4K2BQ8TCG2 481 aa9.92□□□□□ -0.82
TOPBP1-202ENST00000503338 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.92□□□□□ -0.82
TOPBP1-202ENST00000503338 ZNF594Q96JF6 807 aaPredicted RBP9.92□□□□□ -0.82
TOPBP1-202ENST00000503338 CCDC85AQ96PX6 553 aaPredicted RBP9.92□□□□□ -0.82
TOPBP1-202ENST00000503338 RBM19Q9Y4C8 960 aaKnown RBP9.92□□□□□ -0.82
TOPBP1-202ENST00000503338 PNPLA7Q6ZV29 1317 aa9.91□□□□□ -0.82
TOPBP1-202ENST00000503338 TRIM6-TRIM34B2RNG4 842 aa9.91□□□□□ -0.82
TOPBP1-202ENST00000503338 HIP1O00291 1037 aa9.91□□□□□ -0.82
TOPBP1-202ENST00000503338 ATP5JP18859 108 aa9.91□□□□□ -0.82
TOPBP1-202ENST00000503338 CCDC158Q5M9N0 1113 aa9.91□□□□□ -0.82
TOPBP1-202ENST00000503338 SMIM5Q71RC9 77 aa9.91□□□□□ -0.82
TOPBP1-202ENST00000503338 EVI5LQ96CN4 794 aa9.91□□□□□ -0.82
TOPBP1-202ENST00000503338 CCDC8Q9H0W5 538 aaPredicted RBP9.91□□□□□ -0.82
TOPBP1-202ENST00000503338 BSDC1Q9NW68 430 aaPredicted RBP9.91□□□□□ -0.82
TOPBP1-202ENST00000503338 ZNF609O15014 1411 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms