RNA–Protein interactions for RNA: ENST00000503252.1

LPCAT1-203, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 2

Gene LPCAT1, Length 2,694 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-203ENST00000503252 ZNF445P59923 1031 aa22.36■■□□□ 1.17
LPCAT1-203ENST00000503252 COL9A3Q14050 684 aaPredicted RBP22.36■■□□□ 1.17
LPCAT1-203ENST00000503252 MED23Q9ULK4 1368 aa22.35■■□□□ 1.17
LPCAT1-203ENST00000503252 WDR33Q9C0J8 1336 aaKnown RBP22.35■■□□□ 1.17
LPCAT1-203ENST00000503252 SLC27A2O14975 620 aa22.35■■□□□ 1.17
LPCAT1-203ENST00000503252 NUP188Q5SRE5 1749 aa22.35■■□□□ 1.17
LPCAT1-203ENST00000503252 TNS2Q63HR2 1409 aa22.35■■□□□ 1.17
LPCAT1-203ENST00000503252 DTNBO60941 627 aa22.34■■□□□ 1.17
LPCAT1-203ENST00000503252 CCDC9Q9Y3X0 531 aaKnown RBP22.34■■□□□ 1.17
LPCAT1-203ENST00000503252 CHGBP05060 677 aa22.34■■□□□ 1.17
LPCAT1-203ENST00000503252 DNAJC2Q99543 621 aaKnown RBP22.34■■□□□ 1.17
LPCAT1-203ENST00000503252 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.34■■□□□ 1.17
LPCAT1-203ENST00000503252 TAF6LQ9Y6J9 622 aa22.34■■□□□ 1.17
LPCAT1-203ENST00000503252 ATG9AQ7Z3C6 839 aa22.33■■□□□ 1.17
LPCAT1-203ENST00000503252 CCDC83Q8IWF9 413 aa22.33■■□□□ 1.17
LPCAT1-203ENST00000503252 TMOD3Q9NYL9 352 aa22.33■■□□□ 1.17
LPCAT1-203ENST00000503252 TMEM63CQ9P1W3 806 aa22.33■■□□□ 1.17
LPCAT1-203ENST00000503252 GDPD2Q9HCC8 539 aa22.33■■□□□ 1.16
LPCAT1-203ENST00000503252 TJP1Q07157 1748 aa22.32■■□□□ 1.16
LPCAT1-203ENST00000503252 CCDC191Q8NCU4 936 aa22.32■■□□□ 1.16
LPCAT1-203ENST00000503252 SMC3Q9UQE7 1217 aa22.32■■□□□ 1.16
LPCAT1-203ENST00000503252 TOGARAM1Q9Y4F4 1720 aa22.32■■□□□ 1.16
LPCAT1-203ENST00000503252 ZNF330Q9Y3S2 320 aaPredicted RBP22.32■■□□□ 1.16
LPCAT1-203ENST00000503252 TAF5LO75529 589 aa22.31■■□□□ 1.16
LPCAT1-203ENST00000503252 SYT1P21579 422 aa22.31■■□□□ 1.16
LPCAT1-203ENST00000503252 ZNF594Q96JF6 807 aaPredicted RBP22.31■■□□□ 1.16
LPCAT1-203ENST00000503252 HAUS7Q99871 368 aa22.31■■□□□ 1.16
LPCAT1-203ENST00000503252 ASAP1Q9ULH1 1129 aa22.31■■□□□ 1.16
LPCAT1-203ENST00000503252 ST3GAL1Q11201 340 aa22.3■■□□□ 1.16
LPCAT1-203ENST00000503252 ME3Q16798 604 aa22.3■■□□□ 1.16
LPCAT1-203ENST00000503252 NASPP49321 788 aaPredicted RBP22.3■■□□□ 1.16
LPCAT1-203ENST00000503252 DDX46Q7L014 1031 aaKnown RBP22.3■■□□□ 1.16
LPCAT1-203ENST00000503252 NEUROD6Q96NK8 337 aa22.3■■□□□ 1.16
LPCAT1-203ENST00000503252 JCADQ9P266 1359 aa22.29■■□□□ 1.16
LPCAT1-203ENST00000503252 STX6O43752 255 aa22.29■■□□□ 1.16
LPCAT1-203ENST00000503252 LRRC24Q50LG9 513 aa22.29■■□□□ 1.16
LPCAT1-203ENST00000503252 ZSCAN31Q96LW9 406 aaPredicted RBP22.29■■□□□ 1.16
LPCAT1-203ENST00000503252 BTG4Q9NY30 223 aa22.29■■□□□ 1.16
LPCAT1-203ENST00000503252 MBD3O95983 291 aa22.29■■□□□ 1.16
LPCAT1-203ENST00000503252 ZSCAN22P10073 491 aaPredicted RBP22.29■■□□□ 1.16
LPCAT1-203ENST00000503252 PRIM1P49642 420 aaKnown RBP22.29■■□□□ 1.16
LPCAT1-203ENST00000503252 TIMM10P62072 90 aa22.29■■□□□ 1.16
LPCAT1-203ENST00000503252 RNF20Q5VTR2 975 aa22.29■■□□□ 1.16
LPCAT1-203ENST00000503252 NECAB1Q8N987 351 aa22.29■■□□□ 1.16
LPCAT1-203ENST00000503252 PIGBQ92521 554 aa22.29■■□□□ 1.16
LPCAT1-203ENST00000503252 TCEANC2Q96MN5 208 aa22.29■■□□□ 1.16
LPCAT1-203ENST00000503252 SEC62Q99442 399 aaKnown RBP22.29■■□□□ 1.16
LPCAT1-203ENST00000503252 SH2B1Q9NRF2 756 aaPredicted RBP22.29■■□□□ 1.16
LPCAT1-203ENST00000503252 TPCN1Q9ULQ1 816 aa22.29■■□□□ 1.16
LPCAT1-203ENST00000503252 PSMA5P28066 241 aa22.28■■□□□ 1.16
LPCAT1-203ENST00000503252 CCDC129Q6ZRS4 1044 aa22.28■■□□□ 1.16
LPCAT1-203ENST00000503252 NHSL1Q5SYE7 1610 aa22.28■■□□□ 1.16
LPCAT1-203ENST00000503252 ZNF609O15014 1411 aa22.28■■□□□ 1.16
LPCAT1-203ENST00000503252 GJB2P29033 226 aa22.28■■□□□ 1.16
LPCAT1-203ENST00000503252 DNAJC10Q8IXB1 793 aa22.28■■□□□ 1.16
LPCAT1-203ENST00000503252 GADD45BO75293 160 aaPredicted RBP22.27■■□□□ 1.16
LPCAT1-203ENST00000503252 USP48Q86UV5 1035 aa22.27■■□□□ 1.16
LPCAT1-203ENST00000503252 ISCA1Q9BUE6 129 aa22.27■■□□□ 1.16
LPCAT1-203ENST00000503252 SYCE3A1L190 88 aa22.26■■□□□ 1.15
LPCAT1-203ENST00000503252 IL15P40933 162 aaPredicted RBP22.26■■□□□ 1.15
LPCAT1-203ENST00000503252 BLOC1S2Q6QNY1 142 aa22.26■■□□□ 1.15
LPCAT1-203ENST00000503252 RBSNQ9H1K0 784 aa22.26■■□□□ 1.15
LPCAT1-203ENST00000503252 TCHHQ07283 1943 aa22.26■■□□□ 1.15
LPCAT1-203ENST00000503252 EYA2O00167 538 aa22.26■■□□□ 1.15
LPCAT1-203ENST00000503252 TCIRG1Q13488 830 aa22.26■■□□□ 1.15
LPCAT1-203ENST00000503252 PUS3Q9BZE2 481 aaKnown RBP22.26■■□□□ 1.15
LPCAT1-203ENST00000503252 ATG3Q9NT62 314 aa22.25■■□□□ 1.15
LPCAT1-203ENST00000503252 RPS6KB1P23443 525 aa22.25■■□□□ 1.15
LPCAT1-203ENST00000503252 USPL1Q5W0Q7 1092 aa22.25■■□□□ 1.15
LPCAT1-203ENST00000503252 PRDM4Q9UKN5 801 aa22.25■■□□□ 1.15
LPCAT1-203ENST00000503252 CNPY2Q9Y2B0 182 aa22.25■■□□□ 1.15
LPCAT1-203ENST00000503252 KBTBD3Q8NAB2 608 aa22.24■■□□□ 1.15
LPCAT1-203ENST00000503252 HMG20BQ9P0W2 317 aa22.24■■□□□ 1.15
LPCAT1-203ENST00000503252 RFX7Q2KHR2 1363 aa22.24■■□□□ 1.15
LPCAT1-203ENST00000503252 F13A1P00488 732 aa22.24■■□□□ 1.15
LPCAT1-203ENST00000503252 TSGA10IPQ3SY00 556 aa22.24■■□□□ 1.15
LPCAT1-203ENST00000503252 SLFNL1Q499Z3 407 aa22.24■■□□□ 1.15
LPCAT1-203ENST00000503252 GPR108Q9NPR9 543 aa22.24■■□□□ 1.15
LPCAT1-203ENST00000503252 GOLIM4O00461 696 aa22.24■■□□□ 1.15
LPCAT1-203ENST00000503252 MCMDC2Q4G0Z9 681 aa22.24■■□□□ 1.15
LPCAT1-203ENST00000503252 TOB2Q14106 344 aaPredicted RBP22.23■■□□□ 1.15
LPCAT1-203ENST00000503252 LRSAM1Q6UWE0 723 aa22.23■■□□□ 1.15
LPCAT1-203ENST00000503252 FAM89AQ96GI7 184 aa22.22■■□□□ 1.15
LPCAT1-203ENST00000503252 PAG1Q9NWQ8 432 aa22.22■■□□□ 1.15
LPCAT1-203ENST00000503252 MTMR6Q9Y217 621 aa22.22■■□□□ 1.15
LPCAT1-203ENST00000503252 CCDC85AQ96PX6 553 aaPredicted RBP22.22■■□□□ 1.15
LPCAT1-203ENST00000503252 A0A1B0GUL7 405 aa22.21■■□□□ 1.15
LPCAT1-203ENST00000503252 CIAO1O76071 339 aa22.21■■□□□ 1.15
LPCAT1-203ENST00000503252 KIF6Q6ZMV9 814 aa22.21■■□□□ 1.15
LPCAT1-203ENST00000503252 TEX13AQ9BXU3 409 aaPredicted RBP22.21■■□□□ 1.15
LPCAT1-203ENST00000503252 TMEM87AQ8NBN3 555 aa22.21■■□□□ 1.15
LPCAT1-203ENST00000503252 CCDC57Q2TAC2 916 aa22.2■■□□□ 1.14
LPCAT1-203ENST00000503252 STARD3NLO95772 234 aa22.2■■□□□ 1.14
LPCAT1-203ENST00000503252 CCDC173Q0VFZ6 552 aa22.2■■□□□ 1.14
LPCAT1-203ENST00000503252 ANKRD1Q15327 319 aa22.2■■□□□ 1.14
LPCAT1-203ENST00000503252 ALDH8A1Q9H2A2 487 aaPredicted RBP22.2■■□□□ 1.14
LPCAT1-203ENST00000503252 U3KPZ7 1027 aaPredicted RBP22.2■■□□□ 1.14
LPCAT1-203ENST00000503252 TRIM28Q13263 835 aaKnown RBP22.19■■□□□ 1.14
LPCAT1-203ENST00000503252 TRIM44Q96DX7 344 aaPredicted RBP22.19■■□□□ 1.14
LPCAT1-203ENST00000503252 PPP1R9BQ96SB3 815 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms