RNA–Protein interactions for RNA: ENST00000498801.5

GARNL3-222, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-222	ENST00000498801	KIAA1024	Q9UPX6	916 aa		10.25	□□□□□ -0.77
GARNL3-222	ENST00000498801	DISP3	Q9P2K9	1392 aa		10.25	□□□□□ -0.77
GARNL3-222	ENST00000498801	FSHR	P23945	695 aa		10.24	□□□□□ -0.77
GARNL3-222	ENST00000498801	SLC19A1	P41440	591 aa		10.24	□□□□□ -0.77
GARNL3-222	ENST00000498801	ERVH48-1	M5A8F1	160 aa		10.23	□□□□□ -0.77
GARNL3-222	ENST00000498801	SIAH2	O43255	324 aa		10.23	□□□□□ -0.77
GARNL3-222	ENST00000498801	TMF1	P82094	1093 aa		10.23	□□□□□ -0.77
GARNL3-222	ENST00000498801	PSME1	Q06323	249 aa		10.23	□□□□□ -0.77
GARNL3-222	ENST00000498801	DPYD	Q12882	1025 aa		10.23	□□□□□ -0.77
GARNL3-222	ENST00000498801	USP4	Q13107	963 aa		10.23	□□□□□ -0.77
GARNL3-222	ENST00000498801	SIX5	Q8N196	739 aa		10.23	□□□□□ -0.77
GARNL3-222	ENST00000498801	LARGE2	Q8N3Y3	721 aa		10.23	□□□□□ -0.77
GARNL3-222	ENST00000498801	FAM200A	Q8TCP9	573 aa		10.23	□□□□□ -0.77
GARNL3-222	ENST00000498801	DDX17	Q92841	729 aa	Known RBP	10.23	□□□□□ -0.77
GARNL3-222	ENST00000498801	ACE	P12821	1306 aa		10.23	□□□□□ -0.77
GARNL3-222	ENST00000498801	USP54	Q70EL1	1684 aa		10.22	□□□□□ -0.77
GARNL3-222	ENST00000498801	CRYBG1	Q9Y4K1	1723 aa		10.22	□□□□□ -0.77
GARNL3-222	ENST00000498801	WNT7A	O00755	349 aa		10.22	□□□□□ -0.77
GARNL3-222	ENST00000498801	ZBTB7B	O15156	539 aa	Predicted RBP	10.22	□□□□□ -0.77
GARNL3-222	ENST00000498801	MPND	Q8N594	471 aa		10.22	□□□□□ -0.77
GARNL3-222	ENST00000498801	USP19	O94966	1318 aa		10.22	□□□□□ -0.77
GARNL3-222	ENST00000498801	EDC4	Q6P2E9	1401 aa	Known RBP	10.22	□□□□□ -0.77
GARNL3-222	ENST00000498801	DKK1	O94907	266 aa		10.21	□□□□□ -0.77
GARNL3-222	ENST00000498801	GRM5	P41594	1212 aa		10.21	□□□□□ -0.77
GARNL3-222	ENST00000498801	KCNA1	Q09470	495 aa		10.21	□□□□□ -0.77
GARNL3-222	ENST00000498801	KRT28	Q7Z3Y7	464 aa		10.21	□□□□□ -0.77
GARNL3-222	ENST00000498801	MRGPRX2	Q96LB1	330 aa		10.21	□□□□□ -0.77
GARNL3-222	ENST00000498801	PCDHGA11	Q9Y5H2	935 aa		10.21	□□□□□ -0.77
GARNL3-222	ENST00000498801	ANKRD36B	Q8N2N9	1353 aa		10.21	□□□□□ -0.78
GARNL3-222	ENST00000498801	MYOM1	P52179	1685 aa		10.21	□□□□□ -0.78
GARNL3-222	ENST00000498801	MON2	Q7Z3U7	1717 aa		10.21	□□□□□ -0.78
GARNL3-222	ENST00000498801	ABCA3	Q99758	1704 aa		10.21	□□□□□ -0.78
GARNL3-222	ENST00000498801		A0A1W2PP64	1363 aa		10.2	□□□□□ -0.78
GARNL3-222	ENST00000498801	RGPD8	O14715	1765 aa	Predicted RBP	10.2	□□□□□ -0.78
GARNL3-222	ENST00000498801	SLIT3	O75094	1523 aa		10.2	□□□□□ -0.78
GARNL3-222	ENST00000498801	ADH1C	P00326	375 aa		10.2	□□□□□ -0.78
GARNL3-222	ENST00000498801	MYC	P01106	439 aa	Predicted RBP	10.2	□□□□□ -0.78
GARNL3-222	ENST00000498801	SCTR	P47872	440 aa		10.2	□□□□□ -0.78
GARNL3-222	ENST00000498801	SPRYD7	Q5W111	196 aa		10.2	□□□□□ -0.78
GARNL3-222	ENST00000498801	NGDN	Q8NEJ9	315 aa	Known RBP	10.2	□□□□□ -0.78
GARNL3-222	ENST00000498801	TPCN2	Q8NHX9	752 aa		10.2	□□□□□ -0.78
GARNL3-222	ENST00000498801	PMFBP1	Q8TBY8	1022 aa		10.2	□□□□□ -0.78
GARNL3-222	ENST00000498801	CABP1	Q9NZU7	370 aa		10.2	□□□□□ -0.78
GARNL3-222	ENST00000498801	AKAP12	Q02952	1782 aa		10.19	□□□□□ -0.78
GARNL3-222	ENST00000498801	TTC21A	Q8NDW8	1320 aa		10.19	□□□□□ -0.78
GARNL3-222	ENST00000498801		A0A0G2JS52	829 aa		10.19	□□□□□ -0.78
GARNL3-222	ENST00000498801	PATL2	C9JE40	543 aa	Known RBP	10.19	□□□□□ -0.78
GARNL3-222	ENST00000498801	C11orf95	C9JLR9	678 aa	Predicted RBP	10.19	□□□□□ -0.78
GARNL3-222	ENST00000498801	ERVK-9	P63128	1117 aa		10.19	□□□□□ -0.78
GARNL3-222	ENST00000498801	PLA2G2E	Q9NZK7	142 aa		10.19	□□□□□ -0.78
GARNL3-222	ENST00000498801	PIK3C2A	O00443	1686 aa		10.18	□□□□□ -0.78
GARNL3-222	ENST00000498801	ABCC6	O95255	1503 aa		10.18	□□□□□ -0.78
GARNL3-222	ENST00000498801	USP31	Q70CQ4	1352 aa		10.18	□□□□□ -0.78
GARNL3-222	ENST00000498801	XPC	Q01831	940 aa	Predicted RBP	10.18	□□□□□ -0.78
GARNL3-222	ENST00000498801	DHX9	Q08211	1270 aa	Known RBP	10.18	□□□□□ -0.78
GARNL3-222	ENST00000498801	CCDC102B	Q68D86	513 aa		10.18	□□□□□ -0.78
GARNL3-222	ENST00000498801	CC2D2B	Q6DHV5	1058 aa		10.18	□□□□□ -0.78
GARNL3-222	ENST00000498801	B4GALNT3	Q6L9W6	998 aa		10.18	□□□□□ -0.78
GARNL3-222	ENST00000498801	CLP1	Q92989	425 aa	Known RBP	10.18	□□□□□ -0.78
GARNL3-222	ENST00000498801	OVOS2	A0A0J9YW53	1432 aa		10.17	□□□□□ -0.78
GARNL3-222	ENST00000498801	OVOS2	Q6IE36	1432 aa		10.17	□□□□□ -0.78
GARNL3-222	ENST00000498801	CPD	O75976	1380 aa		10.17	□□□□□ -0.78
GARNL3-222	ENST00000498801	KIF7	Q2M1P5	1343 aa		10.17	□□□□□ -0.78
GARNL3-222	ENST00000498801	SEC13	P55735	322 aa		10.17	□□□□□ -0.78
GARNL3-222	ENST00000498801	SWI5	Q1ZZU3	235 aa		10.17	□□□□□ -0.78
GARNL3-222	ENST00000498801	ZNF697	Q5TEC3	545 aa		10.17	□□□□□ -0.78
GARNL3-222	ENST00000498801	CCDC116	Q8IYX3	515 aa		10.17	□□□□□ -0.78
GARNL3-222	ENST00000498801	CYLD	Q9NQC7	956 aa		10.17	□□□□□ -0.78
GARNL3-222	ENST00000498801	TMPRSS4	Q9NRS4	437 aa		10.17	□□□□□ -0.78
GARNL3-222	ENST00000498801	PHRF1	Q9P1Y6	1649 aa	Known RBP	10.17	□□□□□ -0.78
GARNL3-222	ENST00000498801	SLIT2	O94813	1529 aa		10.17	□□□□□ -0.78
GARNL3-222	ENST00000498801	KTN1	Q86UP2	1357 aa	Known RBP	10.16	□□□□□ -0.78
GARNL3-222	ENST00000498801	CCDC7	Q96M83	1385 aa		10.16	□□□□□ -0.78
GARNL3-222	ENST00000498801	WASHC2A	Q641Q2	1341 aa		10.16	□□□□□ -0.78
GARNL3-222	ENST00000498801	NR5A1	Q13285	461 aa		10.16	□□□□□ -0.78
GARNL3-222	ENST00000498801	ZNF784	Q8NCA9	323 aa	Predicted RBP	10.16	□□□□□ -0.78
GARNL3-222	ENST00000498801	POLR3GL	Q9BT43	218 aa		10.16	□□□□□ -0.78
GARNL3-222	ENST00000498801	TERF2IP	Q9NYB0	399 aa		10.16	□□□□□ -0.78
GARNL3-222	ENST00000498801	RBM19	Q9Y4C8	960 aa	Known RBP	10.16	□□□□□ -0.78
GARNL3-222	ENST00000498801	TTC21B	Q7Z4L5	1316 aa		10.15	□□□□□ -0.78
GARNL3-222	ENST00000498801	SFI1	A8K8P3	1242 aa		10.15	□□□□□ -0.78
GARNL3-222	ENST00000498801	NR3C2	P08235	984 aa		10.15	□□□□□ -0.78
GARNL3-222	ENST00000498801	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	10.15	□□□□□ -0.78
GARNL3-222	ENST00000498801	ZNF598	Q86UK7	904 aa	Known RBP	10.15	□□□□□ -0.78
GARNL3-222	ENST00000498801	TMC1	Q8TDI8	760 aa		10.15	□□□□□ -0.78
GARNL3-222	ENST00000498801	OSBPL3	Q9H4L5	887 aa		10.15	□□□□□ -0.78
GARNL3-222	ENST00000498801	NFAT5	O94916	1531 aa		10.15	□□□□□ -0.78
GARNL3-222	ENST00000498801	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	10.14	□□□□□ -0.79
GARNL3-222	ENST00000498801	SLC12A5	Q9H2X9	1139 aa		10.14	□□□□□ -0.79
GARNL3-222	ENST00000498801	CDK12	Q9NYV4	1490 aa	Predicted RBP	10.14	□□□□□ -0.79
GARNL3-222	ENST00000498801	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	10.13	□□□□□ -0.79
GARNL3-222	ENST00000498801	MARF1	Q9Y4F3	1742 aa	Known RBP	10.13	□□□□□ -0.79
GARNL3-222	ENST00000498801	LMO7	Q8WWI1	1683 aa		10.13	□□□□□ -0.79
GARNL3-222	ENST00000498801	BCL9L	Q86UU0	1499 aa		10.13	□□□□□ -0.79
GARNL3-222	ENST00000498801	SSFA2	P28290	1259 aa		10.13	□□□□□ -0.79
GARNL3-222	ENST00000498801	PHLDB3	Q6NSJ2	640 aa		10.13	□□□□□ -0.79
GARNL3-222	ENST00000498801	GZF1	Q9H116	711 aa	Predicted RBP	10.13	□□□□□ -0.79
GARNL3-222	ENST00000498801	PKD2L1	Q9P0L9	805 aa		10.13	□□□□□ -0.79
GARNL3-222	ENST00000498801	RGS17	Q9UGC6	210 aa	Predicted RBP	10.13	□□□□□ -0.79
GARNL3-222	ENST00000498801	IVNS1ABP	Q9Y6Y0	642 aa		10.13	□□□□□ -0.79

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