RNA–Protein interactions for RNA: ENST00000497957.1

PTK7-220, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

TSL 3

Gene PTK7, Length 713 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-220ENST00000497957 SIL1Q9H173 461 aa19.87■□□□□ 0.77
PTK7-220ENST00000497957 GREM2Q9H772 168 aa19.87■□□□□ 0.77
PTK7-220ENST00000497957 SURF6O75683 361 aaKnown RBP19.86■□□□□ 0.77
PTK7-220ENST00000497957 SERPINB2P05120 415 aa19.86■□□□□ 0.77
PTK7-220ENST00000497957 NUCB1Q02818 461 aa19.86■□□□□ 0.77
PTK7-220ENST00000497957 PTPN12Q05209 780 aaKnown RBP19.86■□□□□ 0.77
PTK7-220ENST00000497957 ANKRD45Q5TZF3 282 aa19.86■□□□□ 0.77
PTK7-220ENST00000497957 LNPKQ9C0E8 428 aa19.86■□□□□ 0.77
PTK7-220ENST00000497957 HDAC5Q9UQL6 1122 aa19.86■□□□□ 0.77
PTK7-220ENST00000497957 MYH3P11055 1940 aa19.86■□□□□ 0.77
PTK7-220ENST00000497957 HMGB2P26583 209 aaKnown RBP19.85■□□□□ 0.77
PTK7-220ENST00000497957 PRR5LQ6MZQ0 368 aa19.85■□□□□ 0.77
PTK7-220ENST00000497957 C16orf71Q8IYS4 520 aaPredicted RBP19.85■□□□□ 0.77
PTK7-220ENST00000497957 GCC1Q96CN9 775 aa19.85■□□□□ 0.77
PTK7-220ENST00000497957 PUS3Q9BZE2 481 aaKnown RBP19.85■□□□□ 0.77
PTK7-220ENST00000497957 RGS3P49796 1198 aa19.84■□□□□ 0.77
PTK7-220ENST00000497957 OTUD7AQ8TE49 926 aaPredicted RBP19.84■□□□□ 0.77
PTK7-220ENST00000497957 SEC31BQ9NQW1 1179 aa19.84■□□□□ 0.77
PTK7-220ENST00000497957 MMP10P09238 476 aa19.83■□□□□ 0.77
PTK7-220ENST00000497957 GTF2E1P29083 439 aaPredicted RBP19.83■□□□□ 0.77
PTK7-220ENST00000497957 SLC10A5Q5PT55 438 aa19.83■□□□□ 0.77
PTK7-220ENST00000497957 NYXQ9GZU5 481 aa19.83■□□□□ 0.77
PTK7-220ENST00000497957 NOP58Q9Y2X3 529 aaKnown RBP19.83■□□□□ 0.77
PTK7-220ENST00000497957 TAF1P21675 1872 aa19.82■□□□□ 0.76
PTK7-220ENST00000497957 SASH1O94885 1247 aa19.82■□□□□ 0.76
PTK7-220ENST00000497957 LRRC24Q50LG9 513 aa19.82■□□□□ 0.76
PTK7-220ENST00000497957 TPTE2Q6XPS3 522 aa19.82■□□□□ 0.76
PTK7-220ENST00000497957 SLC51AQ86UW1 340 aa19.82■□□□□ 0.76
PTK7-220ENST00000497957 CHD1LQ86WJ1 897 aa19.82■□□□□ 0.76
PTK7-220ENST00000497957 NLGN1Q8N2Q7 840 aa19.82■□□□□ 0.76
PTK7-220ENST00000497957 CNBD1Q8NA66 436 aa19.82■□□□□ 0.76
PTK7-220ENST00000497957 ITGA6P23229 1130 aa19.81■□□□□ 0.76
PTK7-220ENST00000497957 R3HDM1Q15032 1099 aaKnown RBP19.81■□□□□ 0.76
PTK7-220ENST00000497957 IL1RAPL2Q9NP60 686 aa19.81■□□□□ 0.76
PTK7-220ENST00000497957 COPRSQ9NQ92 184 aa19.81■□□□□ 0.76
PTK7-220ENST00000497957 NRXN2Q9P2S2 1712 aa19.81■□□□□ 0.76
PTK7-220ENST00000497957 ANKRD31Q8N7Z5 1873 aa19.8■□□□□ 0.76
PTK7-220ENST00000497957 ATG9AQ7Z3C6 839 aa19.8■□□□□ 0.76
PTK7-220ENST00000497957 SPEF2Q9C093 1822 aa19.8■□□□□ 0.76
PTK7-220ENST00000497957 PSDA5PKW4 1024 aaPredicted RBP19.79■□□□□ 0.76
PTK7-220ENST00000497957 OS9Q13438 667 aaPredicted RBP19.79■□□□□ 0.76
PTK7-220ENST00000497957 RHPN1Q8TCX5 695 aa19.79■□□□□ 0.76
PTK7-220ENST00000497957 LRP5O75197 1615 aa19.78■□□□□ 0.76
PTK7-220ENST00000497957 NPHP1O15259 732 aa19.78■□□□□ 0.76
PTK7-220ENST00000497957 IFIT5Q13325 482 aaKnown RBP19.78■□□□□ 0.76
PTK7-220ENST00000497957 SF3B3Q15393 1217 aaKnown RBP19.78■□□□□ 0.76
PTK7-220ENST00000497957 CCDC57Q2TAC2 916 aa19.78■□□□□ 0.76
PTK7-220ENST00000497957 ANKRD18BA2A2Z9 1011 aa19.77■□□□□ 0.76
PTK7-220ENST00000497957 ZBTB7AO95365 584 aa19.77■□□□□ 0.76
PTK7-220ENST00000497957 TFCP2Q12800 502 aa19.77■□□□□ 0.76
PTK7-220ENST00000497957 G3BP1Q13283 466 aaKnown RBP eCLIP19.77■□□□□ 0.76
PTK7-220ENST00000497957 LRRCC1Q9C099 1032 aa19.77■□□□□ 0.76
PTK7-220ENST00000497957 RAB11FIP3O75154 756 aa19.76■□□□□ 0.75
PTK7-220ENST00000497957 CCDC152Q4G0S7 254 aa19.76■□□□□ 0.75
PTK7-220ENST00000497957 PARP3Q9Y6F1 533 aa19.76■□□□□ 0.75
PTK7-220ENST00000497957 RIC1Q4ADV7 1423 aa19.76■□□□□ 0.75
PTK7-220ENST00000497957 EYA2O00167 538 aa19.75■□□□□ 0.75
PTK7-220ENST00000497957 TAF7LQ5H9L4 462 aa19.75■□□□□ 0.75
PTK7-220ENST00000497957 TSHZ3Q63HK5 1081 aa19.75■□□□□ 0.75
PTK7-220ENST00000497957 CELF1Q92879 486 aaKnown RBP19.75■□□□□ 0.75
PTK7-220ENST00000497957 NLRP3Q96P20 1036 aa19.75■□□□□ 0.75
PTK7-220ENST00000497957 ATF5Q9Y2D1 282 aaPredicted RBP19.75■□□□□ 0.75
PTK7-220ENST00000497957 RTL9Q8NET4 1388 aa19.74■□□□□ 0.75
PTK7-220ENST00000497957 ST5P78524 1137 aa19.74■□□□□ 0.75
PTK7-220ENST00000497957 KIF1BPQ96EK5 621 aa19.74■□□□□ 0.75
PTK7-220ENST00000497957 PLEKHM2Q8IWE5 1019 aa19.73■□□□□ 0.75
PTK7-220ENST00000497957 TLR7Q9NYK1 1049 aaKnown RBP19.73■□□□□ 0.75
PTK7-220ENST00000497957 RIPOR2Q9Y4F9 1068 aa19.73■□□□□ 0.75
PTK7-220ENST00000497957 COL11A2P13942 1736 aaPredicted RBP19.73■□□□□ 0.75
PTK7-220ENST00000497957 SALL3Q9BXA9 1300 aa19.73■□□□□ 0.75
PTK7-220ENST00000497957 HSP90AB4PQ58FF6 505 aa19.72■□□□□ 0.75
PTK7-220ENST00000497957 HELBQ8NG08 1087 aaPredicted RBP19.72■□□□□ 0.75
PTK7-220ENST00000497957 EAF2Q96CJ1 260 aaPredicted RBP19.72■□□□□ 0.75
PTK7-220ENST00000497957 SNAP23O00161 211 aa19.71■□□□□ 0.75
PTK7-220ENST00000497957 CIAO1O76071 339 aa19.71■□□□□ 0.75
PTK7-220ENST00000497957 LDHAL6AQ6ZMR3 332 aa19.71■□□□□ 0.75
PTK7-220ENST00000497957 CCDC8Q9H0W5 538 aaPredicted RBP19.71■□□□□ 0.75
PTK7-220ENST00000497957 WTIPA6NIX2 430 aaPredicted RBP19.7■□□□□ 0.74
PTK7-220ENST00000497957 HSP90B1P14625 803 aaKnown RBP19.7■□□□□ 0.74
PTK7-220ENST00000497957 ERC1Q8IUD2 1116 aa19.7■□□□□ 0.74
PTK7-220ENST00000497957 CNNM1Q9NRU3 951 aa19.7■□□□□ 0.74
PTK7-220ENST00000497957 IL15P40933 162 aaPredicted RBP19.69■□□□□ 0.74
PTK7-220ENST00000497957 CRY2Q49AN0 593 aa19.69■□□□□ 0.74
PTK7-220ENST00000497957 AACSQ86V21 672 aa19.69■□□□□ 0.74
PTK7-220ENST00000497957 SLC16A10Q8TF71 515 aa19.69■□□□□ 0.74
PTK7-220ENST00000497957 A0A1B0GUL6 1792 aa19.68■□□□□ 0.74
PTK7-220ENST00000497957 KLRG2A4D1S0 409 aaPredicted RBP19.68■□□□□ 0.74
PTK7-220ENST00000497957 TNNI3KQ59H18 835 aa19.68■□□□□ 0.74
PTK7-220ENST00000497957 METTL24Q5JXM2 366 aa19.68■□□□□ 0.74
PTK7-220ENST00000497957 VGLL2Q8N8G2 317 aa19.68■□□□□ 0.74
PTK7-220ENST00000497957 BRIP1Q9BX63 1249 aa19.68■□□□□ 0.74
PTK7-220ENST00000497957 ZBTB47Q9UFB7 747 aaPredicted RBP19.68■□□□□ 0.74
PTK7-220ENST00000497957 FPGT-TNNI3KV9GXZ4 949 aa19.68■□□□□ 0.74
PTK7-220ENST00000497957 ZNF609O15014 1411 aa19.68■□□□□ 0.74
PTK7-220ENST00000497957 TAF5LO75529 589 aa19.67■□□□□ 0.74
PTK7-220ENST00000497957 ADORA1P30542 326 aa19.67■□□□□ 0.74
PTK7-220ENST00000497957 IGHMBP2P38935 993 aaKnown RBP19.67■□□□□ 0.74
PTK7-220ENST00000497957 TIMM10P62072 90 aa19.67■□□□□ 0.74
PTK7-220ENST00000497957 DDX46Q7L014 1031 aaKnown RBP19.67■□□□□ 0.74
PTK7-220ENST00000497957 ANKRD18AQ8IVF6 992 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms