RNA–Protein interactions for RNA: ENST00000497556.5

ATP13A1-214, Transcript of ATPase 13A1, humanhuman

TSL 2

Gene ATP13A1, Length 2,442 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-214ENST00000497556 OSBPL3Q9H4L5 887 aa16.45■□□□□ 0.22
ATP13A1-214ENST00000497556 MRC1P22897 1456 aa16.44■□□□□ 0.22
ATP13A1-214ENST00000497556 MAP4K4O95819 1239 aaPredicted RBP16.44■□□□□ 0.22
ATP13A1-214ENST00000497556 HOXB7P09629 217 aa16.44■□□□□ 0.22
ATP13A1-214ENST00000497556 FLIIQ13045 1269 aa16.44■□□□□ 0.22
ATP13A1-214ENST00000497556 ZNF446Q9NWS9 450 aa16.44■□□□□ 0.22
ATP13A1-214ENST00000497556 NRBP1Q9UHY1 535 aa16.44■□□□□ 0.22
ATP13A1-214ENST00000497556 N4BP2Q86UW6 1770 aaPredicted RBP16.44■□□□□ 0.22
ATP13A1-214ENST00000497556 EIF2S2P20042 333 aaKnown RBP16.44■□□□□ 0.22
ATP13A1-214ENST00000497556 CHMLP26374 656 aa16.44■□□□□ 0.22
ATP13A1-214ENST00000497556 ELF2Q15723 593 aa16.44■□□□□ 0.22
ATP13A1-214ENST00000497556 SLC52A2Q9HAB3 445 aa16.44■□□□□ 0.22
ATP13A1-214ENST00000497556 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.44■□□□□ 0.224e-6■■□□□ 14.2
ATP13A1-214ENST00000497556 V9GYY5 206 aaPredicted RBP16.44■□□□□ 0.22
ATP13A1-214ENST00000497556 AEBP2Q6ZN18 517 aaPredicted RBP16.43■□□□□ 0.22
ATP13A1-214ENST00000497556 ERO1AQ96HE7 468 aa16.43■□□□□ 0.22
ATP13A1-214ENST00000497556 ZFP91Q96JP5 570 aaPredicted RBP16.43■□□□□ 0.22
ATP13A1-214ENST00000497556 CHRM1P11229 460 aaPredicted RBP16.43■□□□□ 0.22
ATP13A1-214ENST00000497556 ZNF592Q92610 1267 aa16.43■□□□□ 0.22
ATP13A1-214ENST00000497556 DCAF5Q96JK2 942 aa16.43■□□□□ 0.22
ATP13A1-214ENST00000497556 BTG4Q9NY30 223 aa16.43■□□□□ 0.22
ATP13A1-214ENST00000497556 F13A1P00488 732 aa16.42■□□□□ 0.22
ATP13A1-214ENST00000497556 LUZP1Q86V48 1076 aa16.42■□□□□ 0.22
ATP13A1-214ENST00000497556 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.42■□□□□ 0.22
ATP13A1-214ENST00000497556 HEG1Q9ULI3 1381 aa16.42■□□□□ 0.22
ATP13A1-214ENST00000497556 IL2RBP14784 551 aa16.41■□□□□ 0.22
ATP13A1-214ENST00000497556 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.41■□□□□ 0.22
ATP13A1-214ENST00000497556 PLA2G4DQ86XP0 818 aa16.41■□□□□ 0.22
ATP13A1-214ENST00000497556 NFATC2IPQ8NCF5 419 aa16.41■□□□□ 0.22
ATP13A1-214ENST00000497556 IL1RAPL2Q9NP60 686 aa16.41■□□□□ 0.22
ATP13A1-214ENST00000497556 C5P01031 1676 aa16.41■□□□□ 0.22
ATP13A1-214ENST00000497556 PCDH11XQ9BZA7 1347 aa16.41■□□□□ 0.22
ATP13A1-214ENST00000497556 PCDH11YQ9BZA8 1340 aa16.41■□□□□ 0.22
ATP13A1-214ENST00000497556 STX6O43752 255 aa16.41■□□□□ 0.22
ATP13A1-214ENST00000497556 DRC7Q8IY82 874 aa16.41■□□□□ 0.22
ATP13A1-214ENST00000497556 ZCRB1Q8TBF4 217 aaKnown RBP16.41■□□□□ 0.22
ATP13A1-214ENST00000497556 EFCC1Q9HA90 598 aa16.41■□□□□ 0.22
ATP13A1-214ENST00000497556 MRVI1Q9Y6F6 885 aa16.41■□□□□ 0.22
ATP13A1-214ENST00000497556 ZNF75DP51815 510 aa16.4■□□□□ 0.22
ATP13A1-214ENST00000497556 SLC39A6Q13433 755 aa16.4■□□□□ 0.22
ATP13A1-214ENST00000497556 CACTINQ8WUQ7 758 aaKnown RBP16.4■□□□□ 0.22
ATP13A1-214ENST00000497556 CHPF2Q9P2E5 772 aa16.4■□□□□ 0.22
ATP13A1-214ENST00000497556 ATP6V1DQ9Y5K8 247 aa16.4■□□□□ 0.22
ATP13A1-214ENST00000497556 CCDC171Q6TFL3 1326 aa16.4■□□□□ 0.22
ATP13A1-214ENST00000497556 HMMRO75330 724 aa16.4■□□□□ 0.22
ATP13A1-214ENST00000497556 GIGYF1O75420 1035 aaPredicted RBP16.4■□□□□ 0.22
ATP13A1-214ENST00000497556 SYT1P21579 422 aa16.4■□□□□ 0.22
ATP13A1-214ENST00000497556 PIP4K2BP78356 416 aa16.4■□□□□ 0.22
ATP13A1-214ENST00000497556 NYAP1Q6ZVC0 841 aa16.4■□□□□ 0.22
ATP13A1-214ENST00000497556 BMS1Q14692 1282 aaKnown RBP16.39■□□□□ 0.21
ATP13A1-214ENST00000497556 ZNF790Q6PG37 636 aa16.39■□□□□ 0.21
ATP13A1-214ENST00000497556 PHAXQ9H814 394 aaKnown RBP16.39■□□□□ 0.21
ATP13A1-214ENST00000497556 PLCH1Q4KWH8 1693 aa16.39■□□□□ 0.21
ATP13A1-214ENST00000497556 TOM1O60784 492 aa16.39■□□□□ 0.21
ATP13A1-214ENST00000497556 GNAI2P04899 355 aa16.39■□□□□ 0.21
ATP13A1-214ENST00000497556 TYRO3Q06418 890 aa16.39■□□□□ 0.21
ATP13A1-214ENST00000497556 NUTM1Q86Y26 1132 aa16.39■□□□□ 0.21
ATP13A1-214ENST00000497556 LRRCC1Q9C099 1032 aa16.39■□□□□ 0.21
ATP13A1-214ENST00000497556 YY1AP1Q9H869 796 aa16.39■□□□□ 0.21
ATP13A1-214ENST00000497556 PRAMEF22A3QJZ6 481 aa16.38■□□□□ 0.21
ATP13A1-214ENST00000497556 H2AFXP16104 143 aaPredicted RBP16.38■□□□□ 0.21
ATP13A1-214ENST00000497556 CCT4P50991 539 aaKnown RBP16.38■□□□□ 0.21
ATP13A1-214ENST00000497556 LRRFIP2Q9Y608 721 aaKnown RBP16.38■□□□□ 0.21
ATP13A1-214ENST00000497556 FHOD1Q9Y613 1164 aa16.38■□□□□ 0.21
ATP13A1-214ENST00000497556 USP27XA6NNY8 438 aa16.38■□□□□ 0.21
ATP13A1-214ENST00000497556 CPA1P15085 419 aa16.38■□□□□ 0.21
ATP13A1-214ENST00000497556 GTF3C6Q969F1 213 aa16.38■□□□□ 0.21
ATP13A1-214ENST00000497556 TRIM5Q9C035 493 aa16.38■□□□□ 0.21
ATP13A1-214ENST00000497556 PXDNLA1KZ92 1463 aa16.38■□□□□ 0.21
ATP13A1-214ENST00000497556 MAP3K11Q16584 847 aa16.37■□□□□ 0.21
ATP13A1-214ENST00000497556 CCDC144BQ3MJ40 725 aa16.37■□□□□ 0.21
ATP13A1-214ENST00000497556 MUM1L1Q5H9M0 696 aa16.37■□□□□ 0.21
ATP13A1-214ENST00000497556 RNF20Q5VTR2 975 aa16.37■□□□□ 0.21
ATP13A1-214ENST00000497556 CCDC144CPQ8IYA2 1237 aa16.37■□□□□ 0.21
ATP13A1-214ENST00000497556 CBX8Q9HC52 389 aa16.37■□□□□ 0.21
ATP13A1-214ENST00000497556 RAD50Q92878 1312 aa16.37■□□□□ 0.21
ATP13A1-214ENST00000497556 SLU7O95391 586 aaKnown RBP16.37■□□□□ 0.21
ATP13A1-214ENST00000497556 ANXA1P04083 346 aa16.37■□□□□ 0.21
ATP13A1-214ENST00000497556 CABP4P57796 275 aa16.37■□□□□ 0.21
ATP13A1-214ENST00000497556 DNM1Q05193 864 aaKnown RBP16.37■□□□□ 0.21
ATP13A1-214ENST00000497556 PTPN14Q15678 1187 aa16.37■□□□□ 0.21
ATP13A1-214ENST00000497556 CLIP2Q9UDT6 1046 aa16.36■□□□□ 0.21
ATP13A1-214ENST00000497556 TDRD7Q8NHU6 1098 aaKnown RBP16.36■□□□□ 0.21
ATP13A1-214ENST00000497556 WNK3Q9BYP7 1800 aa16.36■□□□□ 0.21
ATP13A1-214ENST00000497556 RSPH14Q9UHP6 348 aa16.36■□□□□ 0.21
ATP13A1-214ENST00000497556 TOGARAM1Q9Y4F4 1720 aa16.35■□□□□ 0.21
ATP13A1-214ENST00000497556 TNNT3P45378 269 aaPredicted RBP16.35■□□□□ 0.21
ATP13A1-214ENST00000497556 ANO6Q4KMQ2 910 aa16.35■□□□□ 0.21
ATP13A1-214ENST00000497556 DDX54Q8TDD1 881 aaKnown RBP16.35■□□□□ 0.21
ATP13A1-214ENST00000497556 NUP62CLQ9H1M0 184 aa16.35■□□□□ 0.21
ATP13A1-214ENST00000497556 RASSF4Q9H2L5 321 aa16.35■□□□□ 0.21
ATP13A1-214ENST00000497556 DBF4Q9UBU7 674 aaPredicted RBP16.35■□□□□ 0.21
ATP13A1-214ENST00000497556 ADAMTS2O95450 1211 aa16.35■□□□□ 0.21
ATP13A1-214ENST00000497556 LARGE1O95461 756 aa16.35■□□□□ 0.21
ATP13A1-214ENST00000497556 ATP8B2P98198 1209 aa16.35■□□□□ 0.21
ATP13A1-214ENST00000497556 RASEFQ8IZ41 740 aa16.35■□□□□ 0.21
ATP13A1-214ENST00000497556 ZBTB9Q96C00 473 aa16.35■□□□□ 0.21
ATP13A1-214ENST00000497556 ZNF496Q96IT1 587 aaPredicted RBP16.35■□□□□ 0.21
ATP13A1-214ENST00000497556 NRAPQ86VF7 1730 aa16.35■□□□□ 0.21
ATP13A1-214ENST00000497556 PLA2G4AP47712 749 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms