RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 PRO3102Q9H379 93 aa12.37□□□□□ -0.43
GARNL3-219ENST00000495172 PRDM6Q9NQX0 595 aa12.37□□□□□ -0.43
GARNL3-219ENST00000495172 MRC1P22897 1456 aa12.37□□□□□ -0.43
GARNL3-219ENST00000495172 YDJCA8MPS7 323 aa12.36□□□□□ -0.43
GARNL3-219ENST00000495172 UBE2Q2LH0YL09 131 aa12.36□□□□□ -0.43
GARNL3-219ENST00000495172 CACNB1Q02641 598 aaPredicted RBP12.36□□□□□ -0.43
GARNL3-219ENST00000495172 CDCA5Q96FF9 252 aa12.36□□□□□ -0.43
GARNL3-219ENST00000495172 ZNF496Q96IT1 587 aaPredicted RBP12.36□□□□□ -0.43
GARNL3-219ENST00000495172 MUC3AQ02505 3323 aa12.36□□□□□ -0.43
GARNL3-219ENST00000495172 COL9A1P20849 921 aa12.35□□□□□ -0.43
GARNL3-219ENST00000495172 IL6STP40189 918 aaPredicted RBP12.35□□□□□ -0.43
GARNL3-219ENST00000495172 C3orf67Q6ZVT6 689 aa12.35□□□□□ -0.43
GARNL3-219ENST00000495172 VSIG10Q8N0Z9 540 aa12.35□□□□□ -0.43
GARNL3-219ENST00000495172 NIP7Q9Y221 180 aaKnown RBP eCLIP12.35□□□□□ -0.43
GARNL3-219ENST00000495172 PRAMEF22A3QJZ6 481 aa12.34□□□□□ -0.43
GARNL3-219ENST00000495172 H7C1D1 291 aa12.34□□□□□ -0.43
GARNL3-219ENST00000495172 PPEF1O14829 653 aaPredicted RBP12.34□□□□□ -0.43
GARNL3-219ENST00000495172 MYCNP04198 464 aaPredicted RBP12.34□□□□□ -0.43
GARNL3-219ENST00000495172 PRAMEF18Q5VWM3 479 aa12.34□□□□□ -0.43
GARNL3-219ENST00000495172 GGA3Q9NZ52 723 aa12.34□□□□□ -0.43
GARNL3-219ENST00000495172 PTPN22Q9Y2R2 807 aa12.34□□□□□ -0.43
GARNL3-219ENST00000495172 SULT6B1Q6IMI4 303 aa12.33□□□□□ -0.44
GARNL3-219ENST00000495172 TPTE2Q6XPS3 522 aa12.33□□□□□ -0.44
GARNL3-219ENST00000495172 CD99L2Q8TCZ2 262 aa12.33□□□□□ -0.44
GARNL3-219ENST00000495172 DPF3Q92784 378 aa12.33□□□□□ -0.44
GARNL3-219ENST00000495172 ARMC5Q96C12 935 aa12.33□□□□□ -0.44
GARNL3-219ENST00000495172 DCPSQ96C86 337 aaKnown RBP12.33□□□□□ -0.44
GARNL3-219ENST00000495172 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.33□□□□□ -0.44
GARNL3-219ENST00000495172 TTC28Q96AY4 2481 aa12.32□□□□□ -0.44
GARNL3-219ENST00000495172 LAMA2P24043 3122 aaKnown RBP12.32□□□□□ -0.44
GARNL3-219ENST00000495172 TM4SF4P48230 202 aa12.32□□□□□ -0.44
GARNL3-219ENST00000495172 CRY2Q49AN0 593 aa12.32□□□□□ -0.44
GARNL3-219ENST00000495172 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.32□□□□□ -0.44
GARNL3-219ENST00000495172 DEFB123Q8N688 67 aa12.32□□□□□ -0.44
GARNL3-219ENST00000495172 TMEM106CQ9BVX2 250 aa12.32□□□□□ -0.44
GARNL3-219ENST00000495172 KCNQ5Q9NR82 932 aa12.32□□□□□ -0.44
GARNL3-219ENST00000495172 HLFQ16534 295 aa12.31□□□□□ -0.44
GARNL3-219ENST00000495172 NOM1Q5C9Z4 860 aaKnown RBP12.31□□□□□ -0.44
GARNL3-219ENST00000495172 CC2D2BQ6DHV5 1058 aa12.31□□□□□ -0.44
GARNL3-219ENST00000495172 REM2Q8IYK8 340 aaPredicted RBP12.31□□□□□ -0.44
GARNL3-219ENST00000495172 ZNF333Q96JL9 665 aa12.31□□□□□ -0.44
GARNL3-219ENST00000495172 HEG1Q9ULI3 1381 aa12.3□□□□□ -0.44
GARNL3-219ENST00000495172 PSMD14O00487 310 aa12.3□□□□□ -0.44
GARNL3-219ENST00000495172 KCNQ3O43525 872 aa12.3□□□□□ -0.44
GARNL3-219ENST00000495172 GTF2E1P29083 439 aaPredicted RBP12.3□□□□□ -0.44
GARNL3-219ENST00000495172 SLC4A8Q2Y0W8 1093 aa12.3□□□□□ -0.44
GARNL3-219ENST00000495172 RPGRQ92834 1020 aaKnown RBP12.3□□□□□ -0.44
GARNL3-219ENST00000495172 CDHR2Q9BYE9 1310 aa12.3□□□□□ -0.44
GARNL3-219ENST00000495172 KDM3BQ7LBC6 1761 aa12.3□□□□□ -0.44
GARNL3-219ENST00000495172 TNIP1Q15025 636 aa12.29□□□□□ -0.44
GARNL3-219ENST00000495172 SULF1Q8IWU6 871 aa12.29□□□□□ -0.44
GARNL3-219ENST00000495172 TTC5Q8N0Z6 440 aa12.29□□□□□ -0.44
GARNL3-219ENST00000495172 ERBB4Q15303 1308 aa12.29□□□□□ -0.44
GARNL3-219ENST00000495172 NPM2Q86SE8 214 aaKnown RBP12.28□□□□□ -0.44
GARNL3-219ENST00000495172 STXBP5LQ9Y2K9 1186 aa12.28□□□□□ -0.44
GARNL3-219ENST00000495172 USP16Q9Y5T5 823 aa12.28□□□□□ -0.44
GARNL3-219ENST00000495172 ZNF609O15014 1411 aa12.28□□□□□ -0.44
GARNL3-219ENST00000495172 HOXA10P31260 410 aaPredicted RBP12.27□□□□□ -0.45
GARNL3-219ENST00000495172 KIF4BQ2VIQ3 1234 aa12.27□□□□□ -0.45
GARNL3-219ENST00000495172 ANGEL2Q5VTE6 544 aaKnown RBP12.27□□□□□ -0.45
GARNL3-219ENST00000495172 SHISA4Q96DD7 197 aa12.27□□□□□ -0.45
GARNL3-219ENST00000495172 STAP2Q9UGK3 403 aa12.27□□□□□ -0.45
GARNL3-219ENST00000495172 FZD1Q9UP38 647 aa12.27□□□□□ -0.45
GARNL3-219ENST00000495172 ZSWIM8A7E2V4 1837 aa12.27□□□□□ -0.45
GARNL3-219ENST00000495172 TAF1P21675 1872 aa12.27□□□□□ -0.45
GARNL3-219ENST00000495172 KIAA2012Q0VF49 1180 aa12.26□□□□□ -0.45
GARNL3-219ENST00000495172 PRKG1Q13976 671 aa12.26□□□□□ -0.45
GARNL3-219ENST00000495172 SH3TC2Q8TF17 1288 aa12.26□□□□□ -0.45
GARNL3-219ENST00000495172 DBNDD1Q9H9R9 158 aa12.26□□□□□ -0.45
GARNL3-219ENST00000495172 MTMR10Q9NXD2 777 aa12.26□□□□□ -0.45
GARNL3-219ENST00000495172 PTCH2Q9Y6C5 1203 aa12.26□□□□□ -0.45
GARNL3-219ENST00000495172 RIC1Q4ADV7 1423 aa12.26□□□□□ -0.45
GARNL3-219ENST00000495172 TTLL12Q14166 644 aaPredicted RBP12.25□□□□□ -0.45
GARNL3-219ENST00000495172 ZNF790Q6PG37 636 aa12.25□□□□□ -0.45
GARNL3-219ENST00000495172 CLEC4GQ6UXB4 293 aa12.25□□□□□ -0.45
GARNL3-219ENST00000495172 CFHR5Q9BXR6 569 aa12.25□□□□□ -0.45
GARNL3-219ENST00000495172 RTFDC1Q9BY42 306 aaPredicted RBP12.25□□□□□ -0.45
GARNL3-219ENST00000495172 EFCC1Q9HA90 598 aa12.25□□□□□ -0.45
GARNL3-219ENST00000495172 ATP6V0A2Q9Y487 856 aa12.25□□□□□ -0.45
GARNL3-219ENST00000495172 DUOX1Q9NRD9 1551 aa12.25□□□□□ -0.45
GARNL3-219ENST00000495172 NBPF26B4DH59 902 aa12.24□□□□□ -0.45
GARNL3-219ENST00000495172 IGF2BP3O00425 579 aaKnown RBP eCLIP12.24□□□□□ -0.45
GARNL3-219ENST00000495172 SLC24A1O60721 1099 aa12.24□□□□□ -0.45
GARNL3-219ENST00000495172 ECM2O94769 699 aaPredicted RBP12.24□□□□□ -0.45
GARNL3-219ENST00000495172 PTPN12Q05209 780 aaKnown RBP12.24□□□□□ -0.45
GARNL3-219ENST00000495172 MTHFSDQ2M296 383 aaKnown RBP12.24□□□□□ -0.45
GARNL3-219ENST00000495172 NBPF10Q6P3W6 841 aaKnown RBP12.24□□□□□ -0.45
GARNL3-219ENST00000495172 SAMD1Q6SPF0 538 aaPredicted RBP12.24□□□□□ -0.45
GARNL3-219ENST00000495172 DPP8Q6V1X1 898 aaPredicted RBP12.24□□□□□ -0.45
GARNL3-219ENST00000495172 RBM17Q96I25 401 aaKnown RBP12.24□□□□□ -0.45
GARNL3-219ENST00000495172 CRAMP1Q96RY5 1269 aa12.24□□□□□ -0.45
GARNL3-219ENST00000495172 ZNF652Q9Y2D9 606 aa12.24□□□□□ -0.45
GARNL3-219ENST00000495172 RTL9Q8NET4 1388 aa12.23□□□□□ -0.45
GARNL3-219ENST00000495172 RIMBP2O15034 1052 aa12.23□□□□□ -0.45
GARNL3-219ENST00000495172 ZBTB7BO15156 539 aaPredicted RBP12.23□□□□□ -0.45
GARNL3-219ENST00000495172 HMOX1P09601 288 aa12.23□□□□□ -0.45
GARNL3-219ENST00000495172 GPTP24298 496 aa12.23□□□□□ -0.45
GARNL3-219ENST00000495172 SCARF1Q14162 830 aa12.23□□□□□ -0.45
GARNL3-219ENST00000495172 SLC9C1Q4G0N8 1177 aa12.23□□□□□ -0.45
GARNL3-219ENST00000495172 DPF2Q92785 391 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms